DK948606
Clone id TST38A01NGRL0003_M05
Library
Length 688
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_M05. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
TATTCTGCCTTCCTCGATTGCAAGCTCACCATCGCCATGCCGACTTCCCTAGAGGTCATC
GTGGGTTCCCTGCAGCAAACCAGCCCAGCCATGGCCGGAAGCTCCTCATTCATCACCATC
AAGCCCTTCCATCTTACCTTTGAATTTGTGCGCTCTTACAAACAACCCTTACCCCCTCTC
CAAGCTTCAATGGCCAGCAAGGAAGACCGGGGCGCAGAAGAAAGGGAGAGCAGGAGCTCT
GTATCCTCTCTCTTGAAAGCGGTTCAAGAAGGCCATGGGCCGAATGCAGTGATGCAGCAG
GTATCGTCGCTGCGGCACTTCTTCATGCCGGAGCTTCCCTTTGCACTGATTACAGAGCTC
AAGAAGAGGATGCCTCTATCCCCCCCACAGGATATCGATGAAGGAGAGATGAAAAAGAGC
GGAGGGCTTGATGTTGTAGAGAAGGATCTGGAAGAGCAACTGACCACGGTCATGGGGCCG
AGGTGTGCATGGCCGAGGGAAAAGCTAATTGTTAGCGTCGTGGAAGTGCAGGAAGCAGAT
GGTGCGCAAGCTAATATAGCTGGAGGACCCAGATGCGCATGGCCGAGAGAATCTGCTCAT
GCACTAGCCTCCTTACAGAAATCCTTTCTACAAGAAGAGGATGTGGCAAGGAATGAAAAT
GCTGCAAGTGGTGCAAAGTGTGCTTGGC
■■Homology search results ■■ -
sp_hit_id P54841
Definition sp|P54841|MAFB_MOUSE Transcription factor MafB OS=Mus musculus
Align length 40
Score (bit) 31.6
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948606|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_M05, 5'
(688 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P54841|MAFB_MOUSE Transcription factor MafB OS=Mus musculus G... 32 4.1
sp|P54842|MAFB_RAT Transcription factor MafB OS=Rattus norvegicu... 31 5.4
sp|Q5ZLY0|PHAX_CHICK Phosphorylated adapter RNA export protein O... 30 9.3
sp|Q8CFW7|C2D2A_MOUSE Coiled-coil and C2 domain-containing prote... 30 9.3
sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3 O... 30 9.3

>sp|P54841|MAFB_MOUSE Transcription factor MafB OS=Mus musculus
GN=Mafb PE=1 SV=1
Length = 323

Score = 31.6 bits (70), Expect = 4.1
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Frame = +3

Query: 27 HHRHADFPRGHRGFPAA-----NQPSHGRKLLIHHHQALP 131
HH H P H G+P A + H HHHQA P
Sbjct: 132 HHHHHHHPHPHHGYPGAGVTHDDLGQHAHPHHHHHHQASP 171


>sp|P54842|MAFB_RAT Transcription factor MafB OS=Rattus norvegicus
GN=Mafb PE=1 SV=1
Length = 323

Score = 31.2 bits (69), Expect = 5.4
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Frame = +3

Query: 27 HHRHADFPRGHRGFPAANQP-----SHGRKLLIHHHQALP 131
HH H P H G+P A H HHHQA P
Sbjct: 132 HHHHHHHPHPHHGYPGAGVTHDELGPHAHPHHHHHHQASP 171


>sp|Q5ZLY0|PHAX_CHICK Phosphorylated adapter RNA export protein
OS=Gallus gallus GN=PHAX PE=2 SV=1
Length = 399

Score = 30.4 bits (67), Expect = 9.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1

Query: 406 EMKKSGGLDVVEKDLEEQLTTVMGPRCAWPREKLIVSVVEV 528
EMK G ++ E+D EE++ + R P++ LI VV++
Sbjct: 217 EMKYKGRYEITEEDSEEKVADEIAYRLCEPKKDLIARVVKI 257


>sp|Q8CFW7|C2D2A_MOUSE Coiled-coil and C2 domain-containing protein
2A OS=Mus musculus GN=Cc2d2a PE=2 SV=1
Length = 1633

Score = 30.4 bits (67), Expect = 9.3
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1

Query: 361 KKRMPLSPPQDIDEGEMKKSGGLDVVEKDLEE---QLTTVMGPRCAWP 495
KK+ P SPP+++ + + G +VVE++ E LT GPR P
Sbjct: 39 KKKPPASPPEEMVSDKFQDGGQQEVVEEEPETNLLSLTARRGPRSLPP 86


>sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3
OS=Arabidopsis thaliana GN=BSL3 PE=2 SV=2
Length = 1006

Score = 30.4 bits (67), Expect = 9.3
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +1

Query: 439 EKDLEEQLTTVMGPRCAWPREKLIVSVVEVQEADGAQANIAGGPRC 576
++ + Q+T V+GPRCA P ++ +++E +E DG GPRC
Sbjct: 58 QQQQQPQVTAVVGPRCA-PTYSVVNAIIEKKE-DGP------GPRC 95


tr_hit_id A7URD4
Definition tr|A7URD4|A7URD4_ANOGA AGAP007440-PA OS=Anopheles gambiae
Align length 31
Score (bit) 34.3
E-value 7.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948606|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_M05, 5'
(688 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7URD4|A7URD4_ANOGA AGAP007440-PA OS=Anopheles gambiae GN=AGA... 34 7.7
tr|Q8ENM3|Q8ENM3_OCEIH Hypothetical conserved protein OS=Oceanob... 34 10.0
tr|B0ES08|B0ES08_ENTDI Putative uncharacterized protein OS=Entam... 34 10.0

>tr|A7URD4|A7URD4_ANOGA AGAP007440-PA OS=Anopheles gambiae
GN=AGAP007440 PE=4 SV=1
Length = 998

Score = 34.3 bits (77), Expect = 7.7
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3

Query: 30 HRHADFPRGHRGFPAANQPSHGRKLLIHHHQ 122
H H FP GH FP Q G+ HHHQ
Sbjct: 410 HHHPGFPGGHHHFPQQQQQQQGQGHHHHHHQ 440


>tr|Q8ENM3|Q8ENM3_OCEIH Hypothetical conserved protein
OS=Oceanobacillus iheyensis GN=OB2458 PE=4 SV=1
Length = 372

Score = 33.9 bits (76), Expect = 10.0
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1

Query: 1 YSAFLDCKLTIAMPTSLEVIVGSLQQTSPAMAGSSSFITIKPFHLTFEFVRSY 159
Y FLD + P SLE IV ++ GSS ++I+P+H+ ++ S+
Sbjct: 120 YLLFLDADTELYKPDSLETIVNHFEEK-----GSSGILSIEPYHIVKKWYESF 167


>tr|B0ES08|B0ES08_ENTDI Putative uncharacterized protein
OS=Entamoeba dispar SAW760 GN=EDI_052920 PE=4 SV=1
Length = 1128

Score = 33.9 bits (76), Expect = 10.0
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1

Query: 271 GHGPNAVMQQVSSLRH---FFMPELPFALITELKKRMPLSPPQDIDEGEMKKSGGLDVVE 441
G PN + V S R F +PE ++ EL K + +DI +GE+ S ++
Sbjct: 598 GIAPNYDVDLVGSKREEEVFDIPEDEEMMVEELTKEVDTKKLEDIKKGEISSSSVIECET 657

Query: 442 KDLEEQLTTVMGPRCAWPREKLIVSVVEVQEADGAQAN 555
++ + +LT+ P+ EKL+ V E + +AN
Sbjct: 658 EECKNELTSNTNPKSL--SEKLVEVVGEELKKSIDEAN 693