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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948637
Clone id TST38A01NGRL0003_N12
Library
Length 696
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_N12. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CGCCCAAGCTTGGGCCTAGTTGAGCTGTAAACCAAACTTACTCCTCCAAAAAGACGCGCT
CTTTTTACTTCCTCTCACACTCTCTTGCGCTGACAACATTCCATAGCAGGCCATCGTGAT
CTCACACTTGCACCGGCTGTAGTTCAACTTCACAAACATCATGCCCATGCTTCTCTTCTT
TAGAGTGCAATGGTTTAAAGGCTTAAAGTAAGATGTCGATGACGAGGTGGCTGTCAGGGT
CAGAAAGTCGCCAAGATTCCCAGCGTACGGTCGAGGACATTTCCGTCAGCAATGACCAGT
TTACTGATGCAGCTTTGGAGCTTCCTTTGTTAGGCAGGAGACAAAAAGCAAGCTCTATTG
GAGCCTCCTTGTATTTAACTATTTTGGTGCTGTATGCTGTTGTCGTGATTGCTGCTCCCT
GGATATTTGCTACAGTTACGCAGTTGTATCCTGCTATCCTGTGTAGTTGCAATGTATTGC
TGCTTGGTTGTACAGGCTTGGTGCAGAAACATCTCTCAAAACAAGTCAAGAAAGAAAGAA
GACAGGGCTTTCTTAAGTTTTCGGAGCATTTGAAGCCTCTTATTCATGTACCGTTCATTG
TTTTGTCATACGGGACATCAGGAGTATTGCTAATCATAGTGTGGTCAAACCAATTGAGCA
AAATTGGGTGTTCCGGTTCTGCTGCTTGTACGGTTG
■■Homology search results ■■ -
sp_hit_id Q5UQ44
Definition sp|Q5UQ44|YR390_MIMIV Uncharacterized protein R390 OS=Acanthamoeba polyphaga mimivirus
Align length 99
Score (bit) 32.0
E-value 3.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948637|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_N12, 5'
         (696 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5UQ44|YR390_MIMIV Uncharacterized protein R390 OS=Acanthamoe...    32   3.3  
sp|Q8TD23|ZN675_HUMAN Zinc finger protein 675 OS=Homo sapiens GN...    30   9.5  

>sp|Q5UQ44|YR390_MIMIV Uncharacterized protein R390 OS=Acanthamoeba
           polyphaga mimivirus GN=MIMI_R390 PE=4 SV=1
          Length = 763

 Score = 32.0 bits (71), Expect = 3.3
 Identities = 29/99 (29%), Positives = 41/99 (41%)
 Frame = -3

Query: 643 HTMISNTPDVPYDKTMNGT*IRGFKCSENLRKPCLLSFLTCFERCFCTKPVQPSSNTLQL 464
           + +I  T +  Y+   N     GF  + N  +PC+   L   +  F T  V  S+ T   
Sbjct: 188 YNLIDETCNWHYENESNNMFKFGFIKTTNSYQPCIFIHLILKKNLFTTGLVNNSNQTNNN 247

Query: 463 HRIAGYNCVTVANIQGAAITTTAYSTKIVKYKEAPIELA 347
           H +  Y CV              YS+KI KYK  PI +A
Sbjct: 248 HNVIYYPCVKF------------YSSKI-KYK--PITIA 271


>sp|Q8TD23|ZN675_HUMAN Zinc finger protein 675 OS=Homo sapiens
           GN=ZNF675 PE=1 SV=2
          Length = 568

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
 Frame = -3

Query: 574 FKCSENLRKPCLLSFLTCFERCF----------CTKPVQPSSNTLQLHRIAGYNCVTVAN 425
           FKC E  R  C+LS LT  ER +          C K V  SS   +  RI  Y C  +  
Sbjct: 172 FKCKECGRSFCMLSHLTRHERNYTKVNFCKCEECEKAVNQSSKLTKHKRI--YTCEKLYK 229

Query: 424 IQGAAITTTAYSTKIVKYKE 365
            Q    T   +S  + +YK+
Sbjct: 230 CQECDRTFNQFS-NLTEYKK 248
tr_hit_id B8LMD9
Definition tr|B8LMD9|B8LMD9_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 154
Score (bit) 105.0
E-value 3.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948637|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0003_N12, 5'
         (696 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LMD9|B8LMD9_PICSI Putative uncharacterized protein OS=Picea...   105   3e-21
tr|Q8S8K9|Q8S8K9_ARATH Expressed protein (Putative uncharacteriz...    96   2e-18
tr|Q3E993|Q3E993_ARATH Uncharacterized protein At5g20580.2 (Puta...    95   5e-18
tr|Q3E6T1|Q3E6T1_ARATH Uncharacterized protein At5g20580.1 OS=Ar...    95   5e-18
tr|A9PAE9|A9PAE9_POPTR Putative uncharacterized protein OS=Popul...    95   5e-18
tr|A7PDX0|A7PDX0_VITVI Chromosome chr11 scaffold_13, whole genom...    93   2e-17
tr|B8AJH6|B8AJH6_ORYSI Putative uncharacterized protein OS=Oryza...    87   1e-15
tr|Q6ZGC0|Q6ZGC0_ORYSJ cDNA clone:J023055F23, full insert sequen...    87   1e-15
tr|A3ABX3|A3ABX3_ORYSJ Putative uncharacterized protein OS=Oryza...    87   1e-15
tr|Q6ZGC1|Q6ZGC1_ORYSJ Os02g0778300 protein OS=Oryza sativa subs...    86   2e-15
tr|B6T631|B6T631_MAIZE Putative uncharacterized protein OS=Zea m...    80   2e-13
tr|B4FJV2|B4FJV2_MAIZE Putative uncharacterized protein OS=Zea m...    80   2e-13
tr|Q3E7P7|Q3E7P7_ARATH Uncharacterized protein At2g06005.2 OS=Ar...    77   8e-13
tr|B4G1U8|B4G1U8_MAIZE Putative uncharacterized protein OS=Zea m...    61   8e-08
tr|B6PHX8|B6PHX8_BRAFL Putative uncharacterized protein OS=Branc...    39   0.32 
tr|B6MFJ0|B6MFJ0_BRAFL Putative uncharacterized protein OS=Branc...    39   0.41 

>tr|B8LMD9|B8LMD9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 358

 Score =  105 bits (262), Expect = 3e-21
 Identities = 61/154 (39%), Positives = 88/154 (57%)
 Frame = +3

Query: 219 MTRWLSGSESRQDSQRTVEDISVSNDQFTDAALELPLLGRRQKASSIGASXXXXXXXXXX 398
           M+RW + S  RQ S   +   S + + F D+  E+PL G RQ AS++G            
Sbjct: 1   MSRWFASS-GRQASL-ALPATSENANMFVDSLREVPLFGHRQPASTLGGLLYCFLLVGYA 58

Query: 399 XXXXXXPWIFATVTQLYPAILCSCNVLLLGCTGLVQKHLSKQVKKERRQGFLKFSEHLKP 578
                  WIF++ T+L PA+  S +V+LL  TG +Q +L  QVKKE+ +GF  FS+ LKP
Sbjct: 59  IVLALASWIFSSFTRLLPALFSSGSVVLLIVTGFLQHYLLYQVKKEQMKGFYIFSQKLKP 118

Query: 579 LIHVPFIVLSYGTSGVLLIIVWSNQLSKIGCSGS 680
           ++H+PF  +SYGT+ +LLI+ W   L   G S S
Sbjct: 119 MVHLPFAAISYGTAIILLIMAWQPILRVAGLSVS 152


>tr|Q8S8K9|Q8S8K9_ARATH Expressed protein (Putative uncharacterized
           protein) OS=Arabidopsis thaliana GN=At2g06005 PE=2 SV=1
          Length = 355

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 48/128 (37%), Positives = 71/128 (55%)
 Frame = +3

Query: 291 NDQFTDAALELPLLGRRQKASSIGASXXXXXXXXXXXXXXXXPWIFATVTQLYPAILCSC 470
           N  F D   E PL G R+  S +G+                 PW+F  V QL P++LC C
Sbjct: 17  NAMFLDILHEAPLFGHRKSRSLVGSYLYMLLLAGYAILAAGAPWMFHRVQQLTPSLLCCC 76

Query: 471 NVLLLGCTGLVQKHLSKQVKKERRQGFLKFSEHLKPLIHVPFIVLSYGTSGVLLIIVWSN 650
           +V LL  TG+ Q++   QV+K R QG+  FS+ LK ++ +PF + +YGT+ +LL+IVW  
Sbjct: 77  DVALLVVTGVFQQYFVYQVQKIRLQGYYSFSQKLKHVVRLPFAIAAYGTAAMLLVIVWRP 136

Query: 651 QLSKIGCS 674
           Q+  +  S
Sbjct: 137 QIHILSIS 144


>tr|Q3E993|Q3E993_ARATH Uncharacterized protein At5g20580.2
           (Putative uncharacterized protein At5g20580)
           OS=Arabidopsis thaliana GN=At5g20580 PE=2 SV=1
          Length = 348

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 46/123 (37%), Positives = 68/123 (55%)
 Frame = +3

Query: 291 NDQFTDAALELPLLGRRQKASSIGASXXXXXXXXXXXXXXXXPWIFATVTQLYPAILCSC 470
           N  F D   E PL G R+  S +G+                 PWI  +V  L P++LCSC
Sbjct: 18  NAMFLDILHEAPLFGHRESRSLVGSCIYLIILAGYAILAAGAPWILQSVDYLIPSLLCSC 77

Query: 471 NVLLLGCTGLVQKHLSKQVKKERRQGFLKFSEHLKPLIHVPFIVLSYGTSGVLLIIVWSN 650
           NV LL  TG+ Q++   QV+K R QG+  FS+ LK ++ +PF +++YGT+ +LL + W  
Sbjct: 78  NVALLMLTGMFQQYFVNQVQKIRLQGYYSFSQKLKHVVRLPFAIMAYGTASMLLFMEWRP 137

Query: 651 QLS 659
            +S
Sbjct: 138 YVS 140


>tr|Q3E6T1|Q3E6T1_ARATH Uncharacterized protein At5g20580.1
           OS=Arabidopsis thaliana GN=At5g20580 PE=4 SV=1
          Length = 348

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 46/123 (37%), Positives = 68/123 (55%)
 Frame = +3

Query: 291 NDQFTDAALELPLLGRRQKASSIGASXXXXXXXXXXXXXXXXPWIFATVTQLYPAILCSC 470
           N  F D   E PL G R+  S +G+                 PWI  +V  L P++LCSC
Sbjct: 18  NAMFLDILHEAPLFGHRESRSLVGSCIYLIILACYAILAAGAPWILQSVDYLIPSLLCSC 77

Query: 471 NVLLLGCTGLVQKHLSKQVKKERRQGFLKFSEHLKPLIHVPFIVLSYGTSGVLLIIVWSN 650
           NV LL  TG+ Q++   QV+K R QG+  FS+ LK ++ +PF +++YGT+ +LL + W  
Sbjct: 78  NVALLMLTGMFQQYFVNQVQKIRLQGYYSFSQKLKHVVRLPFAIMAYGTASMLLFMEWRP 137

Query: 651 QLS 659
            +S
Sbjct: 138 YVS 140


>tr|A9PAE9|A9PAE9_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 356

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 47/128 (36%), Positives = 71/128 (55%)
 Frame = +3

Query: 291 NDQFTDAALELPLLGRRQKASSIGASXXXXXXXXXXXXXXXXPWIFATVTQLYPAILCSC 470
           N  F D   E PL G R+  S  GA                 P+IF  +  L P++LCSC
Sbjct: 17  NALFLDIVQEAPLFGHRKSRSIFGAIVYCALLAGYAVLAAGAPYIFRPIKHLVPSLLCSC 76

Query: 471 NVLLLGCTGLVQKHLSKQVKKERRQGFLKFSEHLKPLIHVPFIVLSYGTSGVLLIIVWSN 650
           +V+LL  TG+ Q++   QV+K R QG+  FS+ LK ++ +PF + +YGT+ +LL++VW  
Sbjct: 77  DVVLLILTGIFQQYFVSQVQKIRLQGYYSFSQKLKHIVRLPFAITAYGTATMLLVMVWKP 136

Query: 651 QLSKIGCS 674
            +S +  S
Sbjct: 137 HISVLSVS 144


>tr|A7PDX0|A7PDX0_VITVI Chromosome chr11 scaffold_13, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016445001
           PE=4 SV=1
          Length = 338

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 47/128 (36%), Positives = 69/128 (53%)
 Frame = +3

Query: 291 NDQFTDAALELPLLGRRQKASSIGASXXXXXXXXXXXXXXXXPWIFATVTQLYPAILCSC 470
           N  F D   E PL G R+  S IG+                 PW+F  +  L P++LCSC
Sbjct: 17  NTLFLDVLHEAPLFGHRKPTSIIGSVFYCFLLASYAILAVAAPWMFHPIKSLGPSLLCSC 76

Query: 471 NVLLLGCTGLVQKHLSKQVKKERRQGFLKFSEHLKPLIHVPFIVLSYGTSGVLLIIVWSN 650
           +V  L  TG  Q++L  QV+K R QG+  FS+ LK ++ +PF   +YGT+ +LL++VW  
Sbjct: 77  DVAFLMITGAFQQYLVYQVQKIRLQGYYMFSQKLKHIVRLPFATTAYGTAAMLLVMVWKP 136

Query: 651 QLSKIGCS 674
            +S +  S
Sbjct: 137 HISILSIS 144


>tr|B8AJH6|B8AJH6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09156 PE=4 SV=1
          Length = 356

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/115 (40%), Positives = 62/115 (53%)
 Frame = +3

Query: 300 FTDAALELPLLGRRQKASSIGASXXXXXXXXXXXXXXXXPWIFATVTQLYPAILCSCNVL 479
           F D   E PL G R+  S +G +                PWIF  V  + P +LCS NV+
Sbjct: 23  FIDLLHEAPLSGHREPRSIVGGTLYCILLAGYAAVAVSAPWIFYLVPDMIPPLLCSSNVI 82

Query: 480 LLGCTGLVQKHLSKQVKKERRQGFLKFSEHLKPLIHVPFIVLSYGTSGVLLIIVW 644
           LL  TG+ Q++   QV+K R QG+  FSE LK L  +PF  ++ G + +LLIIVW
Sbjct: 83  LLILTGIFQQYWVHQVRKVRLQGYYDFSEKLKRLARLPFATVASGVASMLLIIVW 137


>tr|Q6ZGC0|Q6ZGC0_ORYSJ cDNA clone:J023055F23, full insert sequence
           OS=Oryza sativa subsp. japonica GN=OJ1534_E09.24-2 PE=2
           SV=1
          Length = 346

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 45/116 (38%), Positives = 63/116 (54%)
 Frame = +3

Query: 297 QFTDAALELPLLGRRQKASSIGASXXXXXXXXXXXXXXXXPWIFATVTQLYPAILCSCNV 476
           +F D   E PL G R+  S +G +                PWIF  V  + P +LCS NV
Sbjct: 12  RFIDLLHEAPLSGHREPRSIVGGTLYCILLAGYAAVAVSAPWIFYLVPDMIPPLLCSSNV 71

Query: 477 LLLGCTGLVQKHLSKQVKKERRQGFLKFSEHLKPLIHVPFIVLSYGTSGVLLIIVW 644
           ++L  TG+ Q++   QV+K R QG+  FSE LK L  +PF  ++ G + +LLIIVW
Sbjct: 72  IILILTGIFQQYWVHQVRKVRLQGYYDFSEKLKRLAQLPFATVASGVASMLLIIVW 127


>tr|A3ABX3|A3ABX3_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_008295 PE=3 SV=1
          Length = 1363

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 45/116 (38%), Positives = 63/116 (54%)
 Frame = +3

Query: 297  QFTDAALELPLLGRRQKASSIGASXXXXXXXXXXXXXXXXPWIFATVTQLYPAILCSCNV 476
            +F D   E PL G R+  S +G +                PWIF  V  + P +LCS NV
Sbjct: 1029 RFIDLLHEAPLSGHREPRSIVGGTLYCILLAGYAAVAVSAPWIFYLVPDMIPPLLCSSNV 1088

Query: 477  LLLGCTGLVQKHLSKQVKKERRQGFLKFSEHLKPLIHVPFIVLSYGTSGVLLIIVW 644
            ++L  TG+ Q++   QV+K R QG+  FSE LK L  +PF  ++ G + +LLIIVW
Sbjct: 1089 IILILTGIFQQYWVHQVRKVRLQGYYDFSEKLKRLAQLPFATVASGVASMLLIIVW 1144


>tr|Q6ZGC1|Q6ZGC1_ORYSJ Os02g0778300 protein OS=Oryza sativa subsp.
           japonica GN=OJ1534_E09.24-1 PE=2 SV=1
          Length = 356

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/115 (39%), Positives = 62/115 (53%)
 Frame = +3

Query: 300 FTDAALELPLLGRRQKASSIGASXXXXXXXXXXXXXXXXPWIFATVTQLYPAILCSCNVL 479
           F D   E PL G R+  S +G +                PWIF  V  + P +LCS NV+
Sbjct: 23  FIDLLHEAPLSGHREPRSIVGGTLYCILLAGYAAVAVSAPWIFYLVPDMIPPLLCSSNVI 82

Query: 480 LLGCTGLVQKHLSKQVKKERRQGFLKFSEHLKPLIHVPFIVLSYGTSGVLLIIVW 644
           +L  TG+ Q++   QV+K R QG+  FSE LK L  +PF  ++ G + +LLIIVW
Sbjct: 83  ILILTGIFQQYWVHQVRKVRLQGYYDFSEKLKRLAQLPFATVASGVASMLLIIVW 137