DK948666 |
Clone id |
TST38A01NGRL0003_O18 |
Library |
TST38 |
Length |
697 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_O18. 5' end sequence. |
Accession |
DK948666 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL2040Contig1 |
Sequence |
GGTAACCCTTCATAAGAAATCTAGCCGATGGAACCTGTTGAACTCTTGTCGTGTTATTGA TAAAGGCTCAATACTTGGAGGTGACGATGATGACGACGTGGAAGAAGCTGTGTTAAGCCA GGCTGAACGAGAAGAGTGGGCTGCTATTCGCATTCAAACCGCCTTTCGTGCGTTCTTGGC AAGGAGAGCACTTTGTGCTTTGAAGGGCCTTGTCAGGCTACAGGCAGCTATTAATGGGCA TAATGCCCAAAATAAATCAATCGGAAGTCTGCGTTCTATCCAAACGTTTGTAAGAATGCA GGCACGAATCCGTGCACATCGCTCATTAAAAGCCAAAGCTGGTCAAGGAGTACCACAAAA GATATCAAGCAATACAGCAGATTCTCAACAAGCTGAAATTGAGGATTGGTGTCATGCAAT CGGATCAGTTGAAGAGATTCAAGCTAGAGCACAACAGAAAGAAGAGGCTTCAATCAAGCG AGAGCGTGCCCTGGCCTATGCTTTCTCAAATCAATGGCGGGCCAAGTCACGATTAAATTT GGAATCCTTATTTGACTATGAGCTTAACAATTCTACATGGAGCTGGATATGGCTAGATCG TTGGATAAATAGTCAAGCTACGGAGGGCTATCTTTCAAATACCAATTTGAAGTCAGATGA TCAAGCAGGTGAAGAAACGACAGGGAAAGAATATCAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SF32 |
Definition |
sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana |
Align length |
182 |
Score (bit) |
82.8 |
E-value |
2.0e-15 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QVQ7 |
Definition |
tr|A7QVQ7|A7QVQ7_VITVI Chromosome undetermined scaffold_191, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
182 |
Score (bit) |
133.0 |
E-value |
1.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948666|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0003_O18, 5' (697 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QVQ7|A7QVQ7_VITVI Chromosome undetermined scaffold_191, who... 133 1e-29 tr|A9NVI1|A9NVI1_PICSI Putative uncharacterized protein OS=Picea... 129 1e-28 tr|B6TPD8|B6TPD8_MAIZE Calmodulin binding protein OS=Zea mays PE... 125 2e-27 tr|O64852|O64852_ARATH Putative SF16 protein (Helianthus annuus)... 125 3e-27 tr|Q2QM35|Q2QM35_ORYSJ Os12g0619000 protein OS=Oryza sativa subs... 122 3e-26 tr|B8BN20|B8BN20_ORYSI Putative uncharacterized protein OS=Oryza... 122 3e-26 tr|Q9LIE3|Q9LIE3_ARATH Similarity to SF16 protein OS=Arabidopsis... 121 4e-26 tr|B8LS04|B8LS04_PICSI Putative uncharacterized protein OS=Picea... 121 4e-26 tr|A7P4K7|A7P4K7_VITVI Chromosome chr4 scaffold_6, whole genome ... 120 8e-26 tr|A5BXD3|A5BXD3_VITVI Putative uncharacterized protein OS=Vitis... 120 8e-26 tr|Q6F3B1|Q6F3B1_ORYSJ Os03g0787200 protein OS=Oryza sativa subs... 120 1e-25 tr|Q10CD0|Q10CD0_ORYSJ IQ calmodulin-binding motif family protei... 120 1e-25 tr|A9RXV1|A9RXV1_PHYPA Predicted protein OS=Physcomitrella paten... 119 1e-25 tr|A2XMP6|A2XMP6_ORYSI Putative uncharacterized protein OS=Oryza... 119 2e-25 tr|A9TYE9|A9TYE9_PHYPA Predicted protein (Fragment) OS=Physcomit... 117 7e-25 tr|A9TJE2|A9TJE2_PHYPA Predicted protein (Fragment) OS=Physcomit... 117 7e-25 tr|A3CJI1|A3CJI1_ORYSJ Putative uncharacterized protein OS=Oryza... 117 9e-25 tr|A9THX3|A9THX3_PHYPA Predicted protein (Fragment) OS=Physcomit... 116 1e-24 tr|B4FU94|B4FU94_MAIZE Calmodulin binding protein OS=Zea mays PE... 115 3e-24 tr|Q9FED7|Q9FED7_ORYSJ Putative uncharacterized protein P0001B06... 113 1e-23 tr|A5BY79|A5BY79_VITVI Putative uncharacterized protein OS=Vitis... 112 2e-23 tr|A9T0P9|A9T0P9_PHYPA Predicted protein (Fragment) OS=Physcomit... 112 2e-23 tr|B8AXD5|B8AXD5_ORYSI Putative uncharacterized protein OS=Oryza... 110 7e-23 tr|B4FK35|B4FK35_MAIZE Putative uncharacterized protein OS=Zea m... 109 1e-22 tr|B4F9U2|B4F9U2_MAIZE IQD1 OS=Zea mays PE=2 SV=1 109 1e-22 tr|Q75L83|Q75L83_ORYSJ cDNA clone:001-045-E09, full insert seque... 109 2e-22 tr|Q0DL48|Q0DL48_ORYSJ Os05g0123200 protein OS=Oryza sativa subs... 109 2e-22 tr|A9TQC9|A9TQC9_PHYPA Predicted protein (Fragment) OS=Physcomit... 108 3e-22 tr|A9RFY0|A9RFY0_PHYPA Predicted protein (Fragment) OS=Physcomit... 108 3e-22 tr|A9SAC4|A9SAC4_PHYPA Predicted protein (Fragment) OS=Physcomit... 108 3e-22
>tr|A7QVQ7|A7QVQ7_VITVI Chromosome undetermined scaffold_191, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007477001 PE=4 SV=1 Length = 433
Score = 133 bits (335), Expect = 1e-29 Identities = 74/182 (40%), Positives = 109/182 (59%), Gaps = 2/182 (1%) Frame = +2
Query: 113 LSQAEREEWAAIRIQTXXXXXXXXXXXXXXKGLVRLQAAINGHNAQNKSIGSLRSIQTFV 292 + Q REEWAA IQT KGLVRLQA + GH + ++ +LR +Q V Sbjct: 89 VQQNVREEWAATYIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALV 148
Query: 293 RMQARIRAHRSLKAKAGQGVPQKISSNTA-DSQQAEIED-WCHAIGSVEEIQARAQQKEE 466 R+QAR+RA R A Q QK+ A +++ EIE+ WC ++GSVE+IQA+ +++E Sbjct: 149 RVQARVRARRVRLALESQTAQQKLQLQLANEARVREIEEGWCDSVGSVEDIQAKLLKRQE 208
Query: 467 ASIKRERALAYAFSNQWRAKSRLNLESLFDYELNNSTWSWIWLDRWINSQATEGYLSNTN 646 A+ KRERA+AYA ++QW+A SR + ++E + S W W WL+RW+ + E + N Sbjct: 209 AAAKRERAMAYALAHQWQAGSR-QQAAPSEFEPDKSNWGWNWLERWMAVRPWENRFLDIN 267
Query: 647 LK 652 L+ Sbjct: 268 LR 269
>tr|A9NVI1|A9NVI1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 340
Score = 129 bits (325), Expect = 1e-28 Identities = 73/191 (38%), Positives = 111/191 (58%), Gaps = 2/191 (1%) Frame = +2
Query: 128 REEWAAIRIQTXXXXXXXXXXXXXXKGLVRLQAAINGHNAQNKSIGSLRSIQTFVRMQAR 307 +EE AAI IQT KG+VRLQA + G+ + ++ +L S+Q+++R+QA+ Sbjct: 62 KEEKAAIHIQTEFRGYLARKSLRKMKGMVRLQALVGGNEVKKQAASTLHSMQSWIRIQAQ 121
Query: 308 IRAHRSLKAKAGQGVPQKISSNTA-DSQQAEIE-DWCHAIGSVEEIQARAQQKEEASIKR 481 +RA RS + QK +++ E+E DW ++EEI AR +Q+EEAS+KR Sbjct: 122 VRARRSCMVAEARIKQQKREHQLKLEAELHELEVDWLDGAETMEEILARVRQREEASLKR 181
Query: 482 ERALAYAFSNQWRAKSRLNLESLFDYELNNSTWSWIWLDRWINSQATEGYLSNTNLKSDD 661 ERA+AYAFS+QWRA SR N YE + + W W W++RWI ++ E L ++K D Sbjct: 182 ERAMAYAFSHQWRANSRTN-HGYAGYEADKTNWGWSWMERWIAARPWENRLLAQSMK-DG 239
Query: 662 QAGEETTGKEY 694 + G++Y Sbjct: 240 LENNVSNGRKY 250
>tr|B6TPD8|B6TPD8_MAIZE Calmodulin binding protein OS=Zea mays PE=2 SV=1 Length = 439
Score = 125 bits (315), Expect = 2e-27 Identities = 69/165 (41%), Positives = 101/165 (61%), Gaps = 2/165 (1%) Frame = +2
Query: 119 QAEREEWAAIRIQTXXXXXXXXXXXXXXKGLVRLQAAINGHNAQNKSIGSLRSIQTFVRM 298 +A++E WAA IQT KGLVRLQA + GH + ++ +LR +Q VR+ Sbjct: 96 EAQKEIWAATIIQTAFRAFLARRARRALKGLVRLQALVRGHIVRKRAATTLRCMQALVRV 155
Query: 299 QARIRAHRSLKAKAGQGVPQKIS-SNTADSQQAEIED-WCHAIGSVEEIQARAQQKEEAS 472 QAR+RA R A Q Q S +T +++ EIED WC +IGSV +IQA+ +++EA+ Sbjct: 156 QARVRARRVRMALENQTDRQNTSPEHTIEARVREIEDGWCDSIGSVGDIQAKLLKRQEAA 215
Query: 473 IKRERALAYAFSNQWRAKSRLNLESLFDYELNNSTWSWIWLDRWI 607 KRERA+AYA ++QW+A SR +E + ++W W WL+RW+ Sbjct: 216 AKRERAMAYALAHQWQASSRQPTA----FEPDKNSWGWNWLERWM 256
>tr|O64852|O64852_ARATH Putative SF16 protein (Helianthus annuus) (At2g26180) OS=Arabidopsis thaliana GN=At2g26180 PE=2 SV=1 Length = 416
Score = 125 bits (314), Expect = 3e-27 Identities = 70/184 (38%), Positives = 107/184 (58%), Gaps = 9/184 (4%) Frame = +2
Query: 119 QAEREEWAAIRIQTXXXXXXXXXXXXXXKGLVRLQAAINGHNAQNKSIGSLRSIQTFVRM 298 +A REEWAAIRIQT KG+VRLQA + G + ++ +LR +Q VR+ Sbjct: 79 KAVREEWAAIRIQTAFRGFLARRALRALKGIVRLQALVRGRQVRKQAAVTLRCMQALVRV 138
Query: 299 QARIRAHRSLKAKAGQGVPQKISSN-TADSQQAEIED-WCHAIGSVEEIQARAQQKEEAS 472 QAR+RA R GQ V + + + T E+E+ WC G+V++I+++ QQ++E + Sbjct: 139 QARVRARRVRMTVEGQAVQKLLDEHRTKSDLLKEVEEGWCDRKGTVDDIKSKLQQRQEGA 198
Query: 473 IKRERALAYAFS-NQWRAKSRLNLES------LFDYELNNSTWSWIWLDRWINSQATEGY 631 KRERALAYA + QWR+ + NL++ L E + ++W W WL+RW+ ++ E Sbjct: 199 FKRERALAYALAQKQWRSTTSSNLKTNSSISYLKSQEFDKNSWGWSWLERWMAARPWETR 258
Query: 632 LSNT 643 L +T Sbjct: 259 LMDT 262
>tr|Q2QM35|Q2QM35_ORYSJ Os12g0619000 protein OS=Oryza sativa subsp. japonica GN=Os12g0619000 PE=2 SV=2 Length = 442
Score = 122 bits (305), Expect = 3e-26 Identities = 72/191 (37%), Positives = 107/191 (56%), Gaps = 3/191 (1%) Frame = +2
Query: 128 REEWAAIRIQTXXXXXXXXXXXXXXKGLVRLQAAINGHNAQNKSIGSLRSIQTFVRMQAR 307 RE AAI IQ+ KGLVRLQA + GH + ++ +L+ +Q VR QAR Sbjct: 91 RENHAAIVIQSAFRAFLARRALRALKGLVRLQALVRGHAVRKQAAETLQCMQALVRAQAR 150
Query: 308 IRAHRSLKAKAGQGVPQKISS-NTADSQQAEIED-WCHAIGSVEEIQARAQQKEEASIKR 481 +RA R + Q +K S N + EIE+ WC IGS E++QA+ +++EA+ KR Sbjct: 151 VRARRVRISLESQVTQKKASEQNVHEDHVWEIEERWCDGIGSAEQMQAKVLKRQEAAAKR 210
Query: 482 ERALAYAFSNQWRAKSR-LNLESLFDYELNNSTWSWIWLDRWINSQATEGYLSNTNLKSD 658 ERA+AYA ++QW+A SR +L E++ + WS WL+RW+ ++ E L +TN K Sbjct: 211 ERAMAYALTHQWQAGSRKQKAATLQGLEVDENQWSQNWLERWMAARPWENRLLDTNAKES 270
Query: 659 DQAGEETTGKE 691 G++ E Sbjct: 271 APTGDDNHADE 281
>tr|B8BN20|B8BN20_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_39148 PE=4 SV=1 Length = 442
Score = 122 bits (305), Expect = 3e-26 Identities = 72/191 (37%), Positives = 107/191 (56%), Gaps = 3/191 (1%) Frame = +2
Query: 128 REEWAAIRIQTXXXXXXXXXXXXXXKGLVRLQAAINGHNAQNKSIGSLRSIQTFVRMQAR 307 RE AAI IQ+ KGLVRLQA + GH + ++ +L+ +Q VR QAR Sbjct: 91 RENHAAIVIQSAFRAFLARRALRALKGLVRLQALVRGHAVRKQAAETLQCMQALVRAQAR 150
Query: 308 IRAHRSLKAKAGQGVPQKISS-NTADSQQAEIED-WCHAIGSVEEIQARAQQKEEASIKR 481 +RA R + Q +K S N + EIE+ WC IGS E++QA+ +++EA+ KR Sbjct: 151 VRARRVRISLESQVTQKKASEQNVHEDHVWEIEERWCDGIGSAEQMQAKVLKRQEAAAKR 210
Query: 482 ERALAYAFSNQWRAKSR-LNLESLFDYELNNSTWSWIWLDRWINSQATEGYLSNTNLKSD 658 ERA+AYA ++QW+A SR +L E++ + WS WL+RW+ ++ E L +TN K Sbjct: 211 ERAMAYALTHQWQAGSRKQKAATLQGLEVDENQWSQNWLERWMAARPWENRLLDTNAKES 270
Query: 659 DQAGEETTGKE 691 G++ E Sbjct: 271 APTGDDNHADE 281
>tr|Q9LIE3|Q9LIE3_ARATH Similarity to SF16 protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 420
Score = 121 bits (304), Expect = 4e-26 Identities = 72/190 (37%), Positives = 112/190 (58%), Gaps = 5/190 (2%) Frame = +2
Query: 119 QAEREEWAAIRIQTXXXXXXXXXXXXXXKGLVRLQAAINGHNAQNKSIGSLRSIQTFVRM 298 + RE AA RIQT KGLVRLQA + GH + ++ +LR +Q VR+ Sbjct: 83 EQSRENRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQALVRV 142
Query: 299 QARIRAHR-----SLKAKAGQGVPQKISSNTADSQQAEIEDWCHAIGSVEEIQARAQQKE 463 QAR+RA R L+++ Q Q+ ++ A ++ E E WC +IGSVE+IQA+ +++ Sbjct: 143 QARVRARRVRLALELESETSQQTLQQQLADEARVREIE-EGWCDSIGSVEQIQAKLLKRQ 201
Query: 464 EASIKRERALAYAFSNQWRAKSRLNLESLFDYELNNSTWSWIWLDRWINSQATEGYLSNT 643 EA+ KRERA+AYA ++Q A +RL L + ++ + + W W WL+RW+ + E ++ Sbjct: 202 EAAAKRERAMAYALTHQ--AGTRL-LSAHSGFQPDKNNWGWNWLERWMAVRPWENRFLDS 258
Query: 644 NLKSDDQAGE 673 NL+ D + GE Sbjct: 259 NLRDDAKLGE 268
>tr|B8LS04|B8LS04_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 395
Score = 121 bits (304), Expect = 4e-26 Identities = 67/166 (40%), Positives = 98/166 (59%), Gaps = 3/166 (1%) Frame = +2
Query: 119 QAEREEWAAIRIQTXXXXXXXXXXXXXXKGLVRLQAAINGHNAQNKSIGSLRSIQTFVRM 298 ++ R+E AAI IQT KGLVRLQA + G + ++ +LR +Q VR+ Sbjct: 95 ESARQESAAICIQTAFRGFLARKALRALKGLVRLQALVRGQAVRKQAAITLRCMQALVRV 154
Query: 299 QARIRAHRSLKAKAGQGVPQKISSN---TADSQQAEIEDWCHAIGSVEEIQARAQQKEEA 469 QAR+RA R A Q + K+ A S +E+ WC ++GSVEE+Q + +Q++EA Sbjct: 155 QARVRARRECMAMESQIMQPKLDHQFRLEAQSHDSEV-GWCDSLGSVEEVQHKMRQRQEA 213
Query: 470 SIKRERALAYAFSNQWRAKSRLNLESLFDYELNNSTWSWIWLDRWI 607 + KRERAL+YA+S+QWRA SR + E E + + W WL+RW+ Sbjct: 214 ASKRERALSYAYSHQWRASSRTSSEQRVVSEPDKTNLGWNWLERWM 259
>tr|A7P4K7|A7P4K7_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032189001 PE=4 SV=1 Length = 430
Score = 120 bits (301), Expect = 8e-26 Identities = 63/178 (35%), Positives = 102/178 (57%), Gaps = 9/178 (5%) Frame = +2
Query: 128 REEWAAIRIQTXXXXXXXXXXXXXXKGLVRLQAAINGHNAQNKSIGSLRSIQTFVRMQAR 307 R+EWAAIRIQT KG+VRLQA + G + ++ +LR +Q VR+QAR Sbjct: 89 RQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQAR 148
Query: 308 IRAHRSLKAKAGQGVPQKISS--NTADSQQAEIEDWCHAIGSVEEIQARAQQKEEASIKR 481 +RA R + GQ V + + + AD + E WC + G++ +++ + Q ++E + KR Sbjct: 149 VRARRVRMSMEGQAVQKLLDERRSQADLLKEAEEGWCDSKGTLADVKTKLQMRQEGAFKR 208
Query: 482 ERALAYAFS-NQWRAKSRLN------LESLFDYELNNSTWSWIWLDRWINSQATEGYL 634 ERA+AY+ + QWR+ N + S+ ++EL+ S+W W WL+RW+ ++ E L Sbjct: 209 ERAIAYSLAQKQWRSSQNANSQTNVSVSSVKNHELDKSSWGWSWLERWMAAKPWENRL 266
>tr|A5BXD3|A5BXD3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003845 PE=4 SV=1 Length = 992
Score = 120 bits (301), Expect = 8e-26 Identities = 63/178 (35%), Positives = 102/178 (57%), Gaps = 9/178 (5%) Frame = +2
Query: 128 REEWAAIRIQTXXXXXXXXXXXXXXKGLVRLQAAINGHNAQNKSIGSLRSIQTFVRMQAR 307 R+EWAAIRIQT KG+VRLQA + G + ++ +LR +Q VR+QAR Sbjct: 632 RQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQAR 691
Query: 308 IRAHRSLKAKAGQGVPQKISS--NTADSQQAEIEDWCHAIGSVEEIQARAQQKEEASIKR 481 +RA R + GQ V + + + AD + E WC + G++ +++ + Q ++E + KR Sbjct: 692 VRARRVRMSMEGQAVQKLLDERRSQADLLKEAEEGWCDSKGTLADVKTKLQMRQEGAFKR 751
Query: 482 ERALAYAFS-NQWRAKSRLN------LESLFDYELNNSTWSWIWLDRWINSQATEGYL 634 ERA+AY+ + QWR+ N + S+ ++EL+ S+W W WL+RW+ ++ E L Sbjct: 752 ERAIAYSLAQKQWRSSQNANSQTNVSVSSVKNHELDKSSWGWSWLERWMAAKPWENRL 809
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