DK948671 |
Clone id |
TST38A01NGRL0003_O23 |
Library |
TST38 |
Length |
679 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0003_O23. 5' end sequence. |
Accession |
DK948671 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1157Contig1 |
Sequence |
AGAATATGATGACGATGATGAGGTGGCAGCACCTCCACCAGCACCTGATAATAACCGTGT GCGCAAGGAGGAAGGGATACCTGATTTAGAGGATATAGAAGGGAAAGAGGAGGAGGAAGT GCGATCTGTGAAGAGTGTAGAAAAGGTAAAACCTGTGGAGGAGAAAGCACCCCCTGCAGT GCTGGATGGAAAACTGGATGCTGCTGAAAACCCAGCAAGTGTTCCCGCTGAAGGAACACC TATGGAGGCTCCTGAGGAGACACCAAATGGGAAGATGGTAGAGCCTATTGTAGTTGCACC CAGTCCTGAAAAAGAGGTAGTCGTAGAGGTGGAACCAAAGGCTAGCCCCAAAAAGGAGCT GGCTGTAGTTACAACTGGCCAAGGGAGAGATCTCACTGGGGCTGTGAAGCATATACACAC ACATTTTGCTCGAGCTTGCAGAAGTGGGAAAGATGTGTCGAGCATGCTGGAAACTCAAAT GGTCTATCACCATTTGGGCTTTGTGGATGTAAAAGACAATACCAAAGTATTCAATGCAAT CACAACACATTGGTCGCGGAAGTCTTCACTTGCAATGCGAGACGCTTATGATGACAATGA TACACCTGAATGTGGGATGTTTGGTAGTCATGCTTCGACATTGGAGCGGCTATATGCGTG GGAAAAGAAATTGTACGAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q14D04 |
Definition |
sp|Q14D04|MELT_HUMAN Ventricular zone-expressed PH domain-containing protein homolog 1 OS=Homo sapiens |
Align length |
62 |
Score (bit) |
34.7 |
E-value |
0.48 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P8E4 |
Definition |
tr|A7P8E4|A7P8E4_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
119 |
Score (bit) |
79.3 |
E-value |
2.0e-13 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948671|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0003_O23, 5' (679 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P8E4|A7P8E4_VITVI Chromosome chr3 scaffold_8, whole genome ... 79 2e-13 tr|A9S735|A9S735_PHYPA Predicted protein OS=Physcomitrella paten... 69 4e-10 tr|A9S1M6|A9S1M6_PHYPA Predicted protein OS=Physcomitrella paten... 68 5e-10 tr|Q8BGH1|Q8BGH1_MOUSE Putative uncharacterized protein OS=Mus m... 67 1e-09 tr|A9S7Q5|A9S7Q5_PHYPA Predicted protein (Fragment) OS=Physcomit... 67 1e-09 tr|Q1EPH7|Q1EPH7_MUSAC Putative uncharacterized protein OS=Musa ... 63 2e-08 tr|Q7X997|Q7X997_ORYSJ Os09g0542500 protein OS=Oryza sativa subs... 63 2e-08 tr|A7R5F9|A7R5F9_VITVI Chromosome undetermined scaffold_957, who... 63 2e-08 tr|A3C141|A3C141_ORYSJ Putative uncharacterized protein OS=Oryza... 63 2e-08 tr|A2Z3M3|A2Z3M3_ORYSI Putative uncharacterized protein OS=Oryza... 63 2e-08 tr|A7P5F7|A7P5F7_VITVI Chromosome chr4 scaffold_6, whole genome ... 61 6e-08 tr|B7ZXF8|B7ZXF8_MAIZE Putative uncharacterized protein OS=Zea m... 61 8e-08 tr|A7P7D2|A7P7D2_VITVI Chromosome chr9 scaffold_7, whole genome ... 61 8e-08 tr|A5B8V5|A5B8V5_VITVI Putative uncharacterized protein OS=Vitis... 61 8e-08 tr|B8LQT1|B8LQT1_PICSI Putative uncharacterized protein OS=Picea... 59 4e-07 tr|A7Q1C2|A7Q1C2_VITVI Chromosome chr10 scaffold_43, whole genom... 59 4e-07 tr|Q9AQW1|Q9AQW1_ORYSA Putative leucine zipper protein (BZIP pro... 58 6e-07 tr|Q7XC46|Q7XC46_ORYSJ Os10g0562700 protein OS=Oryza sativa subs... 58 6e-07 tr|A9RKX2|A9RKX2_PHYPA Predicted protein OS=Physcomitrella paten... 57 1e-06 tr|A5BR55|A5BR55_VITVI Putative uncharacterized protein OS=Vitis... 57 1e-06 tr|A2ZA98|A2ZA98_ORYSI Putative uncharacterized protein OS=Oryza... 57 1e-06 tr|O65666|O65666_ARATH Putative uncharacterized protein AT4g3979... 57 1e-06 tr|Q9SD19|Q9SD19_ARATH Putative uncharacterized protein F24M12.3... 56 2e-06 tr|B8A8L3|B8A8L3_ORYSI Putative uncharacterized protein OS=Oryza... 55 3e-06 tr|A7PKB0|A7PKB0_VITVI Chromosome chr15 scaffold_19, whole genom... 55 3e-06 tr|Q9C824|Q9C824_ARATH BZIP protein, putative; 48652-45869 OS=Ar... 55 5e-06 tr|Q0WQZ9|Q0WQZ9_ARATH Putative bZIP protein OS=Arabidopsis thal... 55 5e-06 tr|B3H4W5|B3H4W5_ARATH Uncharacterized protein At1g52320.3 (Unch... 55 5e-06 tr|Q6AU77|Q6AU77_ORYSJ Os05g0394200 protein OS=Oryza sativa subs... 54 7e-06 tr|B8AY03|B8AY03_ORYSI Putative uncharacterized protein OS=Oryza... 54 7e-06
>tr|A7P8E4|A7P8E4_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036148001 PE=4 SV=1 Length = 583
Score = 79.3 bits (194), Expect = 2e-13 Identities = 51/119 (42%), Positives = 64/119 (53%), Gaps = 16/119 (13%) Frame = +2
Query: 371 TTGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDN-TKVFNAITT 547 T +GR+L A+K I HF RA SGKDVS MLE V+ G ++K N TK+ AIT Sbjct: 106 TPARGRELLDALKDIEDHFIRAYDSGKDVSRMLEASRVHMLSGLEEIKGNSTKLIQAITW 165
Query: 548 HWSRKSSLAMRD-------------AYDDNDTPECGMF--GSHASTLERLYAWEKKLYD 679 H S S + + Y ++ +CG GSH+ TL RLYAWEKKLYD Sbjct: 166 HRSSSRSSSCKSLVASSSKSSSTWTEYKNDLFDDCGGMNSGSHSLTLGRLYAWEKKLYD 224
>tr|A9S735|A9S735_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_125175 PE=4 SV=1 Length = 685
Score = 68.6 bits (166), Expect = 4e-10 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 3/100 (3%) Frame = +2
Query: 386 RDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDNTKVFNAITTHWSRKS 565 RDL +K + +F +A SG++V+ MLET+ ++H F D + + N S Sbjct: 261 RDLLDVLKEVDDYFLKAAESGENVARMLETKKAHYHSSFSDGLKDMYICNTSVLTDDSAS 320
Query: 566 SLAMRDAYDDND---TPECGMFGSHASTLERLYAWEKKLY 676 +MR + + + ECG+ GSHA TL++L AWEKKLY Sbjct: 321 VTSMRSVSNMSVARWSEECGLTGSHAGTLDKLNAWEKKLY 360
>tr|A9S1M6|A9S1M6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_122628 PE=4 SV=1 Length = 594
Score = 68.2 bits (165), Expect = 5e-10 Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 8/114 (7%) Frame = +2
Query: 359 LAVVTTGQG-RDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDNTK--- 526 LAV+ G RDL +K + HF +A G+D+S +LET+ + H F D T Sbjct: 191 LAVIKMESGDRDLLDVLKEVDDHFLQAAERGEDISRILETKKTHFHTSFSDSLKGTSAQS 250
Query: 527 ----VFNAITTHWSRKSSLAMRDAYDDNDTPECGMFGSHASTLERLYAWEKKLY 676 +F + S S++ D + ECG+ GSH+ TL++L+AWEKKL+ Sbjct: 251 IHGLIFYIFQVNGSYIRSIS--DMRSARWSEECGLTGSHSETLDKLFAWEKKLF 302
>tr|Q8BGH1|Q8BGH1_MOUSE Putative uncharacterized protein OS=Mus musculus PE=2 SV=1 Length = 642
Score = 66.6 bits (161), Expect = 1e-09 Identities = 44/135 (32%), Positives = 59/135 (43%), Gaps = 32/135 (23%) Frame = +2
Query: 368 VTTGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDNTKVFNAITT 547 + GR+L A+K + HF RAC SG +VS MLE + + H F D+KDN ++++ Sbjct: 172 MVNNNGRELLEALKDVEDHFLRACESGMEVSKMLEVEKIPSHPTFEDIKDNASRKRSVSS 231
Query: 548 HWSRKSSLAMRDAYDDNDT-PECG-------------------------------MFGSH 631 S SL + + T E G + GSH Sbjct: 232 RSSSCKSLLSSSSRSTSSTWAESGADRRSLLSCSSDTSSTWTENKSEALDGHSGMVSGSH 291
Query: 632 ASTLERLYAWEKKLY 676 TL RLYAWEKKLY Sbjct: 292 FFTLGRLYAWEKKLY 306
>tr|A9S7Q5|A9S7Q5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_11802 PE=4 SV=1 Length = 597
Score = 66.6 bits (161), Expect = 1e-09 Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 12/118 (10%) Frame = +2
Query: 359 LAVVTTGQG-RDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVD-------VK 514 LAVV +G RDL +K + F RA SG++VS +LET+ ++H F D Sbjct: 211 LAVVKAEKGGRDLLDVLKEVDECFLRAADSGENVSRILETKKAHYHSSFSDSLRASFRTS 270
Query: 515 DNTKVFNAITTHWSRKSSLAMRDAYDDND----TPECGMFGSHASTLERLYAWEKKLY 676 N + +T S ++MR + T ECG+ SHA+TL+RL AWEKKLY Sbjct: 271 GNMNSMSVLTDE--SPSIMSMRRNISNMSSARYTEECGLGNSHAATLDRLLAWEKKLY 326
>tr|Q1EPH7|Q1EPH7_MUSAC Putative uncharacterized protein OS=Musa acuminata GN=MA4_106O17.26 PE=4 SV=1 Length = 668
Score = 63.2 bits (152), Expect = 2e-08 Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 5/111 (4%) Frame = +2
Query: 359 LAVVTTGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKD-----NT 523 + +V + L G +K + +F +A GKD++ +LE+ Y H + ++ + Sbjct: 231 IGMVVWRSKKTLEGIIKELDDYFLKAAAGGKDLAVLLESNRTYCHPWDLQAREGRSSTSA 290
Query: 524 KVFNAITTHWSRKSSLAMRDAYDDNDTPECGMFGSHASTLERLYAWEKKLY 676 KV N ++ +WS KS+ + RDA D+N +H +TLE+L+A E+KLY Sbjct: 291 KVVNVLSWNWSFKSTHSNRDAQDENSASRP---SNHCTTLEKLFAEEQKLY 338
>tr|Q7X997|Q7X997_ORYSJ Os09g0542500 protein OS=Oryza sativa subsp. japonica GN=P0478E02.15 PE=4 SV=1 Length = 722
Score = 62.8 bits (151), Expect = 2e-08 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 18/125 (14%) Frame = +2
Query: 359 LAVVTTGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDNTKVFNA 538 L V + GR+L A+K I FARA +GK+V++MLE L ++++K+ +A Sbjct: 241 LEVAVSQPGRELLAALKEIEELFARAAEAGKEVTAMLEAASRVPELK----ENSSKIIHA 296
Query: 539 ITTHWSRKS-SLAMRD---------AYDDNDTPECGMF--------GSHASTLERLYAWE 664 IT H S S S + R ++ D + +F GSH+ TL RLYAWE Sbjct: 297 ITWHRSPSSVSSSYRSELGASSNSLSWTDKSETKSDIFDDYGGMKSGSHSQTLGRLYAWE 356
Query: 665 KKLYD 679 KKLY+ Sbjct: 357 KKLYE 361
>tr|A7R5F9|A7R5F9_VITVI Chromosome undetermined scaffold_957, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00005193001 PE=4 SV=1 Length = 453
Score = 62.8 bits (151), Expect = 2e-08 Identities = 46/143 (32%), Positives = 64/143 (44%), Gaps = 41/143 (28%) Frame = +2
Query: 374 TGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDNTKVF------- 532 T + +D ++K I F RA SGK+VS MLET + +G+ D K + Sbjct: 35 THRAKDFLSSIKDIEHRFFRASESGKEVSRMLETNKI--GMGYCDAKGRSSASRLFGAFQ 92
Query: 533 -------NAITTH-----------WSR---------KSSLAMRDAYDDNDTPE------- 610 +A+ +H W+R K+ L +DND Sbjct: 93 LVCCQEKSALVSHEPLQHGTKIITWNRSTSSRSSSSKNPLTTAATKEDNDDSGSDFVEEF 152
Query: 611 CGMFGSHASTLERLYAWEKKLYD 679 C + GSH+STLERLYAWE+KLYD Sbjct: 153 CMIAGSHSSTLERLYAWERKLYD 175
>tr|A3C141|A3C141_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_029013 PE=4 SV=1 Length = 806
Score = 62.8 bits (151), Expect = 2e-08 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 18/125 (14%) Frame = +2
Query: 359 LAVVTTGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDNTKVFNA 538 L V + GR+L A+K I FARA +GK+V++MLE L ++++K+ +A Sbjct: 250 LEVAVSQPGRELLAALKEIEELFARAAEAGKEVTAMLEAASRVPELK----ENSSKIIHA 305
Query: 539 ITTHWSRKS-SLAMRD---------AYDDNDTPECGMF--------GSHASTLERLYAWE 664 IT H S S S + R ++ D + +F GSH+ TL RLYAWE Sbjct: 306 ITWHRSPSSVSSSYRSELGASSNSLSWTDKSETKSDIFDDYGGMKSGSHSQTLGRLYAWE 365
Query: 665 KKLYD 679 KKLY+ Sbjct: 366 KKLYE 370
>tr|A2Z3M3|A2Z3M3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32233 PE=4 SV=1 Length = 618
Score = 62.8 bits (151), Expect = 2e-08 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 18/125 (14%) Frame = +2
Query: 359 LAVVTTGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDNTKVFNA 538 L V + GR+L A+K I FARA +GK+V++MLE L ++++K+ +A Sbjct: 137 LEVAVSQPGRELLAALKEIEELFARAAEAGKEVTAMLEAASRVPELK----ENSSKIIHA 192
Query: 539 ITTHWSRKS-SLAMRD---------AYDDNDTPECGMF--------GSHASTLERLYAWE 664 IT H S S S + R ++ D + +F GSH+ TL RLYAWE Sbjct: 193 ITWHRSPSSVSSSYRSELGASSNSLSWTDKSETKSDIFDDYGGMKSGSHSQTLGRLYAWE 252
Query: 665 KKLYD 679 KKLY+ Sbjct: 253 KKLYE 257
|