DK948702 |
Clone id |
TST38A01NGRL0004_A07 |
Library |
TST38 |
Length |
703 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_A07. 5' end sequence. |
Accession |
DK948702 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL278Contig1 |
Sequence |
GGTCTGCGTGCAGGAACTCGCTCCTTTGATCCTTGCAAACTTAGGGTTTCCACTTGCAAC GAGGTTGTTCTGAGCTCCTTTCATGTGCGAGGGCTTGCGGCTGTTGCCGCTTCCTACCGA CCCTTTCGATGTGTGGCAGCTACCGTCCACAGTGTACCAACTGTTGCAGACACAAAACAA GCTTTTATTACCAAGTTTAGCAGACCTATTCCTAGTATCTACAACAATGTGATCCAGGAG CTTATTGTTCAGCAGCATCTGATGCGTTACAACCAGACTTACAAATACGATGCAGTCTTT GCTTTGGGTTTTGTTACTGTATATGATCAACTTATGGATGGGTACCCAAGTGAAGCTGAC AAAGAGGCCATATTTAAAGCATATATTGAGGCTTTGAAGGAAGATCCTGAGCAGTACAGG AAAGATGCCAAGAGGCTAGAGGAATGGGCAAGCTCGAAGACCGCACAAACAATAACCTCT TTCAAGTCGGGAGATGGAGAGGTGGAGGTCATTCTCAAGGACATCTCACAGCGCGCATCT GAGGGAAAGTTTCATTATAGTCGATTCTTTGCTATTGGACTTTTCAGGCTTGTTGAGAGG GCGAATGCCACTGATCCGGCAGTTTTGGAGCAGCTCTCAAAAGAACTTAATGTCAGCAAA TTGAGTGTTGATCGGGATCTTGATGTATACCGCAATTTGCTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q84PB7 |
Definition |
sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica |
Align length |
228 |
Score (bit) |
264.0 |
E-value |
3.0e-70 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948702|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_A07, 5' (703 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic... 264 3e-70 sp|Q7XAB8|THF1_SOLTU Protein THYLAKOID FORMATION1, chloroplastic... 261 2e-69 sp|Q9SKT0|THF1_ARATH Protein THYLAKOID FORMATION 1, chloroplasti... 257 4e-68 sp|B0C3M8|THF1_ACAM1 Protein thf1 OS=Acaryochloris marina (strai... 147 4e-35 sp|Q116P5|THF1_TRIEI Protein thf1 OS=Trichodesmium erythraeum (s... 131 4e-30 sp|Q8YZ41|THF1_ANASP Protein thf1 OS=Anabaena sp. (strain PCC 71... 130 7e-30 sp|Q3M4B2|THF1_ANAVT Protein thf1 OS=Anabaena variabilis (strain... 130 9e-30 sp|Q5N664|THF1_SYNP6 Protein thf1 OS=Synechococcus sp. (strain A... 120 9e-27 sp|Q31MY4|THF1_SYNE7 Protein thf1 OS=Synechococcus elongatus (st... 120 9e-27 sp|P73956|THF1_SYNY3 Protein thf1 OS=Synechocystis sp. (strain P... 115 3e-25 sp|Q7NKS7|THF1_GLOVI Protein thf1 OS=Gloeobacter violaceus GN=th... 110 1e-23 sp|P0C1D1|THF1_SYNJB Protein thf1 OS=Synechococcus sp. GN=thf1 P... 109 1e-23 sp|Q8DJT8|THF1_THEEB Protein thf1 OS=Thermosynechococcus elongat... 108 2e-23 sp|Q7V7R3|THF1_PROMM Protein thf1 OS=Prochlorococcus marinus (st... 106 1e-22 sp|Q2JSQ3|THF1_SYNJA Protein thf1 OS=Synechococcus sp. (strain J... 104 5e-22 sp|Q3AY05|THF1_SYNS9 Protein thf1 OS=Synechococcus sp. (strain C... 84 6e-16 sp|Q3AJN7|THF1_SYNSC Protein thf1 OS=Synechococcus sp. (strain C... 82 3e-15 sp|Q46L45|THF1_PROMT Protein thf1 OS=Prochlorococcus marinus (st... 79 2e-14 sp|A2C211|THF1_PROM1 Protein thf1 OS=Prochlorococcus marinus (st... 77 7e-14 sp|Q7U6N6|THF1_SYNPX Protein thf1 OS=Synechococcus sp. (strain W... 76 2e-13 sp|Q7VC23|THF1_PROMA Protein thf1 OS=Prochlorococcus marinus GN=... 73 1e-12 sp|A7I9P7|RNH2_METB6 Ribonuclease HII OS=Methanoregula boonei (s... 37 0.10 sp|Q9U489|LIN41_CAEEL Protein lin-41 OS=Caenorhabditis elegans G... 33 1.5 sp|A4R1D5|YME2_MAGGR Mitochondrial escape protein 2 OS=Magnaport... 32 3.3 sp|Q180Q8|UVRC_CLOD6 UvrABC system protein C OS=Clostridium diff... 32 4.4 sp|P0C6U2|R1A_CVH22 Replicase polyprotein 1a OS=Human coronaviru... 32 4.4 sp|P0C6X1|R1AB_CVH22 Replicase polyprotein 1ab OS=Human coronavi... 32 4.4 sp|Q8CTF5|Y528_STAES Uncharacterized membrane protein SE_0528 OS... 31 5.7 sp|Q5HQY3|Y413_STAEQ Uncharacterized membrane protein SERP0413 O... 31 5.7 sp|P19976|FRI1_SOYBN Ferritin-1, chloroplastic OS=Glycine max PE... 31 5.7
>sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1 Length = 287
Score = 264 bits (675), Expect = 3e-70 Identities = 134/228 (58%), Positives = 165/228 (72%), Gaps = 8/228 (3%) Frame = +1
Query: 43 RVSTCNEVVLSSFHVRGLAAVAASYRP-------FRCVAATVHSVPTVADTKQAFITKFS 201 R + C ++ G AV S RP RCVA PTVA+TK F+ + Sbjct: 14 RAADCRPSTAAAAAGAGAGAVVLSVRPRRGSRSVVRCVATAGDVPPTVAETKMNFLKSYK 73
Query: 202 RPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAIFKA 381 RPI SIY+ V+QEL+VQQHLMRY TY+YDAVFALGFVTVYDQLM+GYPS D++AIFKA Sbjct: 74 RPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLMEGYPSNEDRDAIFKA 133
Query: 382 YIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGKFHY 558 YI AL EDPEQYR DA+++EEWA S+ ++ F S DGE+E ILKDIS+RA +G F Y Sbjct: 134 YITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAILKDISERAQGKGSFSY 193
Query: 559 SRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702 SRFFA+GLFRL+E ANAT+P +L++L LN++K SVDRDLDVYRN+L Sbjct: 194 SRFFAVGLFRLLELANATEPTILDKLCAALNINKRSVDRDLDVYRNIL 241
>sp|Q7XAB8|THF1_SOLTU Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum tuberosum GN=THF1 PE=2 SV=1 Length = 293
Score = 261 bits (668), Expect = 2e-69 Identities = 127/192 (66%), Positives = 156/192 (81%), Gaps = 1/192 (0%) Frame = +1
Query: 130 CVAATVHSVPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALG 309 C +++ +PTVADTK F+T + RPIP++YN V+QELIVQQHL RY ++Y+YD VFALG Sbjct: 57 CTSSSAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALG 116
Query: 310 FVTVYDQLMDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKS 489 FVTVYDQLM+GYPSE D+ AIFKAYIEALKEDPEQYR DA++LEEWA ++ A T+ F S Sbjct: 117 FVTVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSS 176
Query: 490 GDGEVEVILKDISQRA-SEGKFHYSRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLS 666 +GE+E I KDI+QRA ++ F YSR FA+GLFRL+E AN TDP +LE+L LNV+K S Sbjct: 177 KEGEIENIFKDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPTILEKLCAALNVNKKS 236
Query: 667 VDRDLDVYRNLL 702 VDRDLDVYRNLL Sbjct: 237 VDRDLDVYRNLL 248
>sp|Q9SKT0|THF1_ARATH Protein THYLAKOID FORMATION 1, chloroplastic OS=Arabidopsis thaliana GN=THF1 PE=1 SV=1 Length = 300
Score = 257 bits (657), Expect = 4e-68 Identities = 126/213 (59%), Positives = 164/213 (76%), Gaps = 1/213 (0%) Frame = +1
Query: 67 VLSSFHVRGLAAVAASYRPFRCVAATVHSVPTVADTKQAFITKFSRPIPSIYNNVIQELI 246 + + F L + + S C++ VP V++TK F+ + RPIPSIYN V+QELI Sbjct: 35 ICTKFSRLSLNSRSTSKSLIHCMSNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELI 94
Query: 247 VQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAIFKAYIEALKEDPEQYRKD 426 VQQHLMRY +TY+YD VFALGFVTVYDQLM+GYPS+ D++AIFKAYIEAL EDP+QYR D Sbjct: 95 VQQHLMRYKKTYRYDPVFALGFVTVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRID 154
Query: 427 AKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGKFHYSRFFAIGLFRLVERA 603 A+++EEWA S+T+ ++ F S +G++E +LKDI+ RA S+ F YSRFFA+GLFRL+E A Sbjct: 155 AQKMEEWARSQTSASLVDFSSKEGDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELA 214
Query: 604 NATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702 +ATDP VL++L LN++K SVDRDLDVYRNLL Sbjct: 215 SATDPTVLDKLCASLNINKKSVDRDLDVYRNLL 247
>sp|B0C3M8|THF1_ACAM1 Protein thf1 OS=Acaryochloris marina (strain MBIC 11017) GN=thf1 PE=3 SV=1 Length = 247
Score = 147 bits (372), Expect = 4e-35 Identities = 82/198 (41%), Positives = 124/198 (62%), Gaps = 12/198 (6%) Frame = +1
Query: 145 VHSVPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVY 324 ++++ TV+DTK+AF + +RP+ S+Y V++EL+V+ HL+R N+ ++YD +FALG T + Sbjct: 1 MNNLRTVSDTKRAFYSIHTRPVNSVYRRVVEELMVEMHLLRVNEDFRYDPIFALGVTTSF 60
Query: 325 DQLMDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSF-----KS 489 D+ MDGY E DK+AIF A +A + DP Q +KD +RL E A SK+AQ + + S Sbjct: 61 DRFMDGYQPENDKDAIFSAICKAQEADPVQMKKDGQRLTELAQSKSAQEMLDWITQAANS 120
Query: 490 GDGEVEVILKDISQRASEGKFHYSRFFAIGLFRLVE--RANATD-----PAVLEQLSKEL 648 G E++ L++I+Q KF YSR FAIGLF L+E N T L + L Sbjct: 121 GGDELQWQLRNIAQNP---KFKYSRLFAIGLFTLLELSEGNITQDEESLAEFLPNICTVL 177
Query: 649 NVSKLSVDRDLDVYRNLL 702 N+S+ + +DL++YR L Sbjct: 178 NISESKLQKDLEIYRGNL 195
>sp|Q116P5|THF1_TRIEI Protein thf1 OS=Trichodesmium erythraeum (strain IMS101) GN=thf1 PE=3 SV=1 Length = 239
Score = 131 bits (329), Expect = 4e-30 Identities = 72/192 (37%), Positives = 110/192 (57%), Gaps = 10/192 (5%) Frame = +1
Query: 145 VHSVPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVY 324 +++ TV+DTK+ F +RPI SIYN VI+EL+V+ HL+ N Y Y+ +ALG VT + Sbjct: 1 MNNTRTVSDTKKTFYHFHTRPINSIYNRVIEELLVEMHLISVNVDYSYNPFYALGVVTAF 60
Query: 325 DQLMDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSF---KSGD 495 D+ M GY + DK +IF A I+ +EDP +YR DAK LE+ A +A I S+ Sbjct: 61 DRFMQGYSPQEDKTSIFNALIQGQEEDPNKYRSDAKGLEDLAGKISASDILSWICLSKNI 120
Query: 496 GEVEVILKDISQRASEGKFHYSRFFAIGLFRLVE-------RANATDPAVLEQLSKELNV 654 + + D+ + KF YSR FAIGLF L+E + L+++ + LN+ Sbjct: 121 DNTQYLQDDLRAISENSKFRYSRLFAIGLFTLLEIVDTELIKEQEKRTEALKKICQSLNL 180
Query: 655 SKLSVDRDLDVY 690 + + +D+D+Y Sbjct: 181 VEEKLLKDIDLY 192
>sp|Q8YZ41|THF1_ANASP Protein thf1 OS=Anabaena sp. (strain PCC 7120) GN=thf1 PE=3 SV=1 Length = 233
Score = 130 bits (327), Expect = 7e-30 Identities = 71/194 (36%), Positives = 118/194 (60%), Gaps = 13/194 (6%) Frame = +1
Query: 160 TVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMD 339 TV+DTK+ F +RPI +IY V++EL+V+ HL+ N + Y+ ++ALG VT +D+ M+ Sbjct: 6 TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFME 65
Query: 340 GYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKS------GDGE 501 GY E DKE+IF A +A++++P++YR+DA+RL+ A S + ++ S D + Sbjct: 66 GYQPERDKESIFSAICQAVEQEPQRYRQDAERLQAVAQSLPVNDLVAWLSQANHLQQDAD 125
Query: 502 VEVILKDISQRASEGKFHYSRFFAIGLFRLVERAN-------ATDPAVLEQLSKELNVSK 660 ++ L+ I A+ F YSR FAIGLF L+E++N L+ ++ L++S Sbjct: 126 LQAQLQAI---ANNSNFKYSRLFAIGLFTLLEQSNPDLVKDEKQRTEALKSIAAGLHLSD 182
Query: 661 LSVDRDLDVYRNLL 702 +DL++YR+ L Sbjct: 183 DKFSKDLELYRSNL 196
>sp|Q3M4B2|THF1_ANAVT Protein thf1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=thf1 PE=3 SV=1 Length = 233
Score = 130 bits (326), Expect = 9e-30 Identities = 72/194 (37%), Positives = 118/194 (60%), Gaps = 13/194 (6%) Frame = +1
Query: 160 TVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMD 339 TV+DTK+ F +RPI +IY V++EL+V+ HL+ N + Y+ ++ALG VT +D+ M Sbjct: 6 TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFMQ 65
Query: 340 GYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKS------GDGE 501 GY E DKE+IF A +A++++P++YR+DA+RL+ A S + ++ S D + Sbjct: 66 GYQPERDKESIFSAICQAVEQEPQRYRQDAERLKAVAQSLPVNDLVAWLSQANHLQQDAD 125
Query: 502 VEVILKDISQRASEGKFHYSRFFAIGLFRLVERAN-------ATDPAVLEQLSKELNVSK 660 ++ L+ I AS F YSR FAIGLF L+E++N L+ ++ L++S Sbjct: 126 LQAQLQAI---ASNPNFKYSRLFAIGLFTLLEQSNPDLVKDEKQRTEALKTIAAGLHLSD 182
Query: 661 LSVDRDLDVYRNLL 702 + +DL++YR+ L Sbjct: 183 DKLSKDLELYRSNL 196
>sp|Q5N664|THF1_SYNP6 Protein thf1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=thf1 PE=3 SV=2 Length = 254
Score = 120 bits (300), Expect = 9e-27 Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 11/195 (5%) Frame = +1
Query: 151 SVPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQ 330 SVPTV+D+K+AF + RPI +Y V++EL+V+ HL+ N ++ YD +FALG VT +D Sbjct: 3 SVPTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDS 62
Query: 331 LMDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEW----ASSKTAQTITSFKSGDG 498 M Y +F A +A++++PEQYR DA + E S Q +T ++ Sbjct: 63 FMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEALGN 122
Query: 499 EVEVILKDISQRASEGKFHYSRFFAIGLFRLVERAN---ATDPAVLE----QLSKELNVS 657 E++ A +F YSR FAIGLF L+E A DP L+ +++ ++ Sbjct: 123 APELVRSSFQAIAGRSEFKYSRLFAIGLFSLLETAAPDLVQDPEALKTTVTAIAERFHLP 182
Query: 658 KLSVDRDLDVYRNLL 702 + +DLD+YR+ L Sbjct: 183 SDKLQKDLDLYRSNL 197
>sp|Q31MY4|THF1_SYNE7 Protein thf1 OS=Synechococcus elongatus (strain PCC 7942) GN=thf1 PE=3 SV=2 Length = 254
Score = 120 bits (300), Expect = 9e-27 Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 11/195 (5%) Frame = +1
Query: 151 SVPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQ 330 SVPTV+D+K+AF + RPI +Y V++EL+V+ HL+ N ++ YD +FALG VT +D Sbjct: 3 SVPTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDS 62
Query: 331 LMDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEW----ASSKTAQTITSFKSGDG 498 M Y +F A +A++++PEQYR DA + E S Q +T ++ Sbjct: 63 FMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEALGN 122
Query: 499 EVEVILKDISQRASEGKFHYSRFFAIGLFRLVERAN---ATDPAVLE----QLSKELNVS 657 E++ A +F YSR FAIGLF L+E A DP L+ +++ ++ Sbjct: 123 APELVRSSFQAIAGRSEFKYSRLFAIGLFSLLETAAPDLVQDPEALKTTVTAIAERFHLP 182
Query: 658 KLSVDRDLDVYRNLL 702 + +DLD+YR+ L Sbjct: 183 SDKLQKDLDLYRSNL 197
>sp|P73956|THF1_SYNY3 Protein thf1 OS=Synechocystis sp. (strain PCC 6803) GN=thf1 PE=3 SV=1 Length = 240
Score = 115 bits (287), Expect = 3e-25 Identities = 75/202 (37%), Positives = 108/202 (53%), Gaps = 19/202 (9%) Frame = +1
Query: 154 VPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQL 333 + TV+D K+ F T +SRPI SIY ++EL+V+ HL+ N + YD +FALG VT ++ Sbjct: 4 IRTVSDAKRKFFTHYSRPISSIYRRFVEELLVEMHLLSVNIDFTYDPIFALGIVTSFNSF 63
Query: 334 MDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKR---------LEEWASSKTAQTITSFK 486 M GY AIF A + ++P+Q R+DAK L+ W ++ ++ Sbjct: 64 MQGYQPAEQLPAIFNALCHGVDQNPDQVRQDAKNVAASAHHIGLDAWVTAAASEQ----A 119
Query: 487 SGDGEVEVILKDISQRASEGKFHYSRFFAIGLFRLVERANATDPAV----------LEQL 636 SGD + L I QR KF YSR FAIGL+ L+ DP V L +L Sbjct: 120 SGDNLLLNTLTGIHQR---HKFKYSRLFAIGLYTLLA---DQDPEVKDNDEKRQDYLTRL 173
Query: 637 SKELNVSKLSVDRDLDVYRNLL 702 S+ L++S V +DLD+YR+ L Sbjct: 174 SELLDLSLDKVVKDLDLYRSNL 195
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NPI7 |
Definition |
tr|A9NPI7|A9NPI7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
238 |
Score (bit) |
293.0 |
E-value |
1.0e-77 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948702|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_A07, 5' (703 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NPI7|A9NPI7_PICSI Putative uncharacterized protein OS=Picea... 293 1e-77 tr|A9T683|A9T683_PHYPA Predicted protein OS=Physcomitrella paten... 272 1e-71 tr|A2YML2|A2YML2_ORYSI Putative uncharacterized protein OS=Oryza... 268 3e-70 tr|B4FEK7|B4FEK7_MAIZE Chloroplast-localized Ptr ToxA-binding pr... 266 7e-70 tr|A7Q395|A7Q395_VITVI Chromosome chr12 scaffold_47, whole genom... 266 7e-70 tr|A9SXF8|A9SXF8_PHYPA Predicted protein (Fragment) OS=Physcomit... 266 1e-69 tr|B6UAI2|B6UAI2_MAIZE Chloroplast-localized Ptr ToxA-binding pr... 265 2e-69 tr|Q0D5I3|Q0D5I3_ORYSJ Os07g0558500 protein OS=Oryza sativa subs... 264 4e-69 tr|Q5YL57|Q5YL57_WHEAT Chloroplast-localized Ptr ToxA-binding pr... 263 1e-68 tr|Q5XUV3|Q5XUV3_WHEAT Chloroplast inositol phosphatase-like pro... 263 1e-68 tr|A7XZB8|A7XZB8_NICBE Chloroplast-localized protein OS=Nicotian... 253 6e-66 tr|A8IXS3|A8IXS3_BRACM Chloroplast light-regulated protein OS=Br... 252 2e-65 tr|B7FJN0|B7FJN0_MEDTR Putative uncharacterized protein OS=Medic... 249 2e-64 tr|B7FIT6|B7FIT6_MEDTR Putative uncharacterized protein OS=Medic... 196 9e-49 tr|A8HR79|A8HR79_CHLRE Inositol phosphatase-like protein OS=Chla... 172 2e-41 tr|A0YRG1|A0YRG1_9CYAN Putative uncharacterized protein OS=Lyngb... 144 4e-33 tr|B7KI38|B7KI38_9CHRO Photosystem II biogenesis protein Psp29 O... 135 3e-30 tr|A4RUH3|A4RUH3_OSTLU Predicted protein (Fragment) OS=Ostreococ... 134 7e-30 tr|B4WPI2|B4WPI2_9SYNE Photosystem II biogenesis protein Psp29 O... 129 1e-28 tr|B4B360|B4B360_9CHRO Thf1-like protein OS=Cyanothece sp. PCC 7... 129 2e-28 tr|B2J353|B2J353_NOSP7 Putative uncharacterized protein OS=Nosto... 127 5e-28 tr|B8HQ62|B8HQ62_9CHRO Photosystem II biogenesis protein Psp29 O... 123 1e-26 tr|Q01CK9|Q01CK9_OSTTA Inositol phosphatase-like protein (ISS) O... 120 7e-26 tr|B0JTG0|B0JTG0_MICAN Psb29 Photosystem II sub-stoichiometric s... 117 6e-25 tr|B4C2B8|B4C2B8_9CHRO Thf1-like protein OS=Cyanothece sp. PCC 8... 117 9e-25 tr|A8YNG1|A8YNG1_MICAE Similar to tr|P73956|P73956 OS=Microcysti... 115 2e-24 tr|B1XHY6|B1XHY6_SYNP2 Putative uncharacterized protein OS=Synec... 114 5e-24 tr|B7K277|B7K277_SYNP8 Photosystem II biogenesis protein Psp29 O... 114 6e-24 tr|A3IRC2|A3IRC2_9CHRO Putative uncharacterized protein OS=Cyano... 114 6e-24 tr|B1WNF0|B1WNF0_CYAA5 Photosystem II 22 kD protein OS=Cyanothec... 113 1e-23
>tr|A9NPI7|A9NPI7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 304
Score = 293 bits (749), Expect = 1e-77 Identities = 152/238 (63%), Positives = 185/238 (77%), Gaps = 4/238 (1%) Frame = +1
Query: 1 GLRAGTRSFDPCKLRVSTCNEVVLSSFHV--RGLAAVAASYRPFRC-VAATVHSVPTVAD 171 G+R F + R T ++ +L + ++ R L ++S RC ++ T +PTVA+ Sbjct: 25 GIRPSNNIFSSLRWRTITGHDQLLLTVNISSRSLPKASSSLSVTRCSMSITASDIPTVAE 84
Query: 172 TKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPS 351 TK AF+ + RPIPSIYNNVIQELIVQQHLMRY +TY+YDAVFALGFV+VYDQLMDGYPS Sbjct: 85 TKSAFLKAYKRPIPSIYNNVIQELIVQQHLMRYKRTYQYDAVFALGFVSVYDQLMDGYPS 144
Query: 352 EADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQ 531 + D EAIF+AYI ALKEDPEQYR DAK+LEEWASS+ A++I F+S DGEVE ILKDI++ Sbjct: 145 DGDSEAIFRAYINALKEDPEQYRSDAKKLEEWASSQDAKSIVEFQSRDGEVEGILKDIAE 204
Query: 532 RASEGK-FHYSRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702 RA E K F YSRFFAIGLFRL+ERANATDP VLE+L LN+SK SVDRDLD+YRN+L Sbjct: 205 RAREKKIFSYSRFFAIGLFRLLERANATDPVVLEKLCGALNISKPSVDRDLDIYRNIL 262
>tr|A9T683|A9T683_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_140925 PE=4 SV=1 Length = 215
Score = 272 bits (696), Expect = 1e-71 Identities = 135/184 (73%), Positives = 157/184 (85%), Gaps = 1/184 (0%) Frame = +1
Query: 154 VPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQL 333 VPTVADTK +FI + +PIPSIY+NVIQEL+VQQHLMRYN TY YD +FALGFVTVYDQL Sbjct: 6 VPTVADTKLSFIKSYRKPIPSIYSNVIQELLVQQHLMRYNSTYVYDPIFALGFVTVYDQL 65
Query: 334 MDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVI 513 MDGYP++ D++AIFKAYI AL EDPEQYRKD+K+LEEWA++++ I F DGEVE Sbjct: 66 MDGYPNDEDRDAIFKAYISALNEDPEQYRKDSKKLEEWAAAQSGSGIADFAGKDGEVEAA 125
Query: 514 LKDISQRAS-EGKFHYSRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVY 690 LKDI++RA+ + KFHYSRFFAIGLFRL+E A A+DPAVLE LSK LNVSK SVDRDLDVY Sbjct: 126 LKDIAERAAGKEKFHYSRFFAIGLFRLLECAKASDPAVLETLSKALNVSKRSVDRDLDVY 185
Query: 691 RNLL 702 RNLL Sbjct: 186 RNLL 189
>tr|A2YML2|A2YML2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26464 PE=4 SV=1 Length = 287
Score = 268 bits (685), Expect = 3e-70 Identities = 135/228 (59%), Positives = 166/228 (72%), Gaps = 8/228 (3%) Frame = +1
Query: 43 RVSTCNEVVLSSFHVRGLAAVAASYRP-------FRCVAATVHSVPTVADTKQAFITKFS 201 R + C ++ G AV S RP RCVA PTVA+TK F+ + Sbjct: 14 RAADCRPSTAAAAAGAGAGAVVLSVRPRRGSRSVVRCVATAGDVPPTVAETKMNFLKSYK 73
Query: 202 RPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAIFKA 381 RPIPSIY+ V+QEL+VQQHLMRY TY+YDAVFALGFVTVYDQLM+GYPS D++AIFKA Sbjct: 74 RPIPSIYSTVLQELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLMEGYPSNEDRDAIFKA 133
Query: 382 YIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGKFHY 558 YI AL EDPEQYR DA+++EEWA S+ ++ F S DGE+E ILKDIS+RA +G F Y Sbjct: 134 YITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAILKDISERAQGKGSFSY 193
Query: 559 SRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702 SRFFA+GLFRL+E ANAT+P +L++L LN++K SVDRDLDVYRN+L Sbjct: 194 SRFFAVGLFRLLELANATEPTILDKLCAALNINKRSVDRDLDVYRNIL 241
>tr|B4FEK7|B4FEK7_MAIZE Chloroplast-localized Ptr ToxA-binding protein1 OS=Zea mays PE=2 SV=1 Length = 284
Score = 266 bits (681), Expect = 7e-70 Identities = 136/231 (58%), Positives = 169/231 (73%), Gaps = 1/231 (0%) Frame = +1
Query: 13 GTRSFDPCKLRVSTCNEVVLSSFHVRGLAAVAASYRPFRCVAATVHSVPTVADTKQAFIT 192 G + P + VVLS+ RG +V RCVA T PTVA+TK F+ Sbjct: 14 GAAEWRPSSTAAAVSGAVVLSARSRRGSRSVV------RCVATTGDVPPTVAETKLNFLK 67
Query: 193 KFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAI 372 + RPIPSIY+ V+QEL+VQQHLMRY +TY+YDAVFALGFVTVYDQLM+GYPS D+++I Sbjct: 68 SYKRPIPSIYSAVLQELLVQQHLMRYKKTYQYDAVFALGFVTVYDQLMEGYPSNEDRDSI 127
Query: 373 FKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGK 549 FKAYI AL EDP+QYR DA ++EEWA S+ ++ F S DGE+E ILKDIS+RA +G Sbjct: 128 FKAYITALNEDPDQYRADALKMEEWARSQNGSSLVDFSSRDGEIEAILKDISERAKGKGN 187
Query: 550 FHYSRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702 F YSRFFA+GLFRL+E +NAT+P +L++L LNVSK SVDRDLDVYRN+L Sbjct: 188 FSYSRFFAVGLFRLLELSNATEPTILDKLCAALNVSKRSVDRDLDVYRNIL 238
>tr|A7Q395|A7Q395_VITVI Chromosome chr12 scaffold_47, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029202001 PE=4 SV=1 Length = 297
Score = 266 bits (681), Expect = 7e-70 Identities = 132/207 (63%), Positives = 168/207 (81%), Gaps = 1/207 (0%) Frame = +1
Query: 85 VRGLAAVAASYRPFRCVAATVHSVPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLM 264 VR ++ ++S +C+++ V VPTV++TK F+ + RPIPSIYN ++QEL+VQQHLM Sbjct: 46 VRSSSSSSSSRMVVQCMSS-VTDVPTVSETKMNFLKNYKRPIPSIYNTLLQELMVQQHLM 104
Query: 265 RYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEE 444 RY +TY+YDAVFALGFVTVYDQLMDGYPS+ D++ IF+ YI+AL+EDPEQYRKDA+ LEE Sbjct: 105 RYKRTYRYDAVFALGFVTVYDQLMDGYPSDEDRDIIFQVYIKALREDPEQYRKDAQMLEE 164
Query: 445 WASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGKFHYSRFFAIGLFRLVERANATDPA 621 WA S+TA ++ F S +GEVE ILKDI++RA +G F YSRFFAIGLFRL+E ANAT+P Sbjct: 165 WARSQTASSLVEFSSKEGEVEGILKDIAERAGGKGSFSYSRFFAIGLFRLLELANATEPT 224
Query: 622 VLEQLSKELNVSKLSVDRDLDVYRNLL 702 +LE+L N+SK SVDRDLDVYRNLL Sbjct: 225 ILEKLCAAFNISKRSVDRDLDVYRNLL 251
>tr|A9SXF8|A9SXF8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_136845 PE=4 SV=1 Length = 205
Score = 266 bits (679), Expect = 1e-69 Identities = 132/184 (71%), Positives = 155/184 (84%), Gaps = 1/184 (0%) Frame = +1
Query: 154 VPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQL 333 VPTV++TK +FI + +PIPSIY+NVIQEL+VQQHLMRYN TY YD +FALGFVTVYDQL Sbjct: 6 VPTVSETKASFIKSYRKPIPSIYSNVIQELLVQQHLMRYNSTYTYDPIFALGFVTVYDQL 65
Query: 334 MDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVI 513 MDGYP D+++IF AYI AL EDP +YR+DAK+LEEWAS+++A IT F S DGEVE Sbjct: 66 MDGYPDATDRDSIFTAYINALNEDPVKYREDAKKLEEWASAQSASGITDFTSRDGEVEAT 125
Query: 514 LKDISQRA-SEGKFHYSRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVY 690 LK I++RA S+ KFHYSRFFAIGLFRL+E A A+DPAVLE LSK LNV+K SVDRDLDVY Sbjct: 126 LKSIAERAGSKDKFHYSRFFAIGLFRLLECAKASDPAVLESLSKALNVNKRSVDRDLDVY 185
Query: 691 RNLL 702 RNLL Sbjct: 186 RNLL 189
>tr|B6UAI2|B6UAI2_MAIZE Chloroplast-localized Ptr ToxA-binding protein1 OS=Zea mays PE=2 SV=1 Length = 284
Score = 265 bits (677), Expect = 2e-69 Identities = 136/231 (58%), Positives = 168/231 (72%), Gaps = 1/231 (0%) Frame = +1
Query: 13 GTRSFDPCKLRVSTCNEVVLSSFHVRGLAAVAASYRPFRCVAATVHSVPTVADTKQAFIT 192 G + P + VVLS+ RG +V RCVA T PTVA+TK F+ Sbjct: 14 GAAEWRPSSTAAAVSGAVVLSARSRRGSCSVV------RCVATTGDVPPTVAETKLNFLK 67
Query: 193 KFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAI 372 + RPIPSIY+ V+QEL+VQQHLMRY +TY+YDAVFALGFVTVYDQLM+ YPS DK++I Sbjct: 68 SYKRPIPSIYSAVLQELLVQQHLMRYKKTYQYDAVFALGFVTVYDQLMERYPSNEDKDSI 127
Query: 373 FKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGK 549 FKAYI AL EDP+QYR DA ++EEWA S+ ++ F S DGE+E ILKDIS+RA +G Sbjct: 128 FKAYITALNEDPDQYRADALKMEEWARSQNGSSLVDFSSRDGEIEAILKDISERAKGKGN 187
Query: 550 FHYSRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702 F YSRFFA+GLFRL+E +NAT+P +L++L LNVSK SVDRDLDVYRN+L Sbjct: 188 FSYSRFFAVGLFRLLELSNATEPTILDKLCAALNVSKRSVDRDLDVYRNIL 238
>tr|Q0D5I3|Q0D5I3_ORYSJ Os07g0558500 protein OS=Oryza sativa subsp. japonica GN=Os07g0558500 PE=2 SV=1 Length = 287
Score = 264 bits (675), Expect = 4e-69 Identities = 134/228 (58%), Positives = 165/228 (72%), Gaps = 8/228 (3%) Frame = +1
Query: 43 RVSTCNEVVLSSFHVRGLAAVAASYRP-------FRCVAATVHSVPTVADTKQAFITKFS 201 R + C ++ G AV S RP RCVA PTVA+TK F+ + Sbjct: 14 RAADCRPSTAAAAAGAGAGAVVLSVRPRRGSRSVVRCVATAGDVPPTVAETKMNFLKSYK 73
Query: 202 RPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAIFKA 381 RPI SIY+ V+QEL+VQQHLMRY TY+YDAVFALGFVTVYDQLM+GYPS D++AIFKA Sbjct: 74 RPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLMEGYPSNEDRDAIFKA 133
Query: 382 YIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGKFHY 558 YI AL EDPEQYR DA+++EEWA S+ ++ F S DGE+E ILKDIS+RA +G F Y Sbjct: 134 YITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAILKDISERAQGKGSFSY 193
Query: 559 SRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702 SRFFA+GLFRL+E ANAT+P +L++L LN++K SVDRDLDVYRN+L Sbjct: 194 SRFFAVGLFRLLELANATEPTILDKLCAALNINKRSVDRDLDVYRNIL 241
>tr|Q5YL57|Q5YL57_WHEAT Chloroplast-localized Ptr ToxA-binding protein1 OS=Triticum aestivum GN=TaThf1 PE=2 SV=1 Length = 286
Score = 263 bits (671), Expect = 1e-68 Identities = 134/220 (60%), Positives = 164/220 (74%), Gaps = 1/220 (0%) Frame = +1
Query: 46 VSTCNEVVLSSFHVRGLAAVAASYRPFRCVAATVHSVPTVADTKQAFITKFSRPIPSIYN 225 VS V+L++ RG +V RCVA PTVADTK F+ + RPIPSIY+ Sbjct: 27 VSVSGGVMLNARARRGSRSVV------RCVATAGDIPPTVADTKMNFLKSYKRPIPSIYS 80
Query: 226 NVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAIFKAYIEALKED 405 V+QEL+VQQHLMRY TY+YD VFALGFVTVYDQLM+GYPS D++AIFK+Y+ AL ED Sbjct: 81 TVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLMEGYPSTEDRDAIFKSYVTALNED 140
Query: 406 PEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGKFHYSRFFAIGL 582 PEQYR DA+R+EEWA S+ + F S DGE+E ILKDIS+RA +G F YSRFFA+GL Sbjct: 141 PEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESILKDISERAQGKGNFSYSRFFAVGL 200
Query: 583 FRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702 FRL+E +NAT+P VL++L LN++K SVDRDLDVYRNLL Sbjct: 201 FRLLELSNATEPTVLDKLCAALNINKKSVDRDLDVYRNLL 240
>tr|Q5XUV3|Q5XUV3_WHEAT Chloroplast inositol phosphatase-like protein OS=Triticum aestivum PE=2 SV=1 Length = 286
Score = 263 bits (671), Expect = 1e-68 Identities = 134/220 (60%), Positives = 164/220 (74%), Gaps = 1/220 (0%) Frame = +1
Query: 46 VSTCNEVVLSSFHVRGLAAVAASYRPFRCVAATVHSVPTVADTKQAFITKFSRPIPSIYN 225 VS V+L++ RG +V RCVA PTVADTK F+ + RPIPSIY+ Sbjct: 27 VSVSGGVMLNARARRGSRSVV------RCVATAGDIPPTVADTKMNFLKSYKRPIPSIYS 80
Query: 226 NVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAIFKAYIEALKED 405 V+QEL+VQQHLMRY TY+YD VFALGFVTVYDQLM+GYPS D++AIFK+Y+ AL ED Sbjct: 81 TVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLMEGYPSTEDRDAIFKSYVTALNED 140
Query: 406 PEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGKFHYSRFFAIGL 582 PEQYR DA+R+EEWA S+ + F S DGE+E ILKDIS+RA +G F YSRFFA+GL Sbjct: 141 PEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESILKDISERAQGKGNFSYSRFFAVGL 200
Query: 583 FRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702 FRL+E +NAT+P VL++L LN++K SVDRDLDVYRNLL Sbjct: 201 FRLLELSNATEPTVLDKLCAALNINKKSVDRDLDVYRNLL 240
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