DK948702
Clone id TST38A01NGRL0004_A07
Library
Length 703
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_A07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GGTCTGCGTGCAGGAACTCGCTCCTTTGATCCTTGCAAACTTAGGGTTTCCACTTGCAAC
GAGGTTGTTCTGAGCTCCTTTCATGTGCGAGGGCTTGCGGCTGTTGCCGCTTCCTACCGA
CCCTTTCGATGTGTGGCAGCTACCGTCCACAGTGTACCAACTGTTGCAGACACAAAACAA
GCTTTTATTACCAAGTTTAGCAGACCTATTCCTAGTATCTACAACAATGTGATCCAGGAG
CTTATTGTTCAGCAGCATCTGATGCGTTACAACCAGACTTACAAATACGATGCAGTCTTT
GCTTTGGGTTTTGTTACTGTATATGATCAACTTATGGATGGGTACCCAAGTGAAGCTGAC
AAAGAGGCCATATTTAAAGCATATATTGAGGCTTTGAAGGAAGATCCTGAGCAGTACAGG
AAAGATGCCAAGAGGCTAGAGGAATGGGCAAGCTCGAAGACCGCACAAACAATAACCTCT
TTCAAGTCGGGAGATGGAGAGGTGGAGGTCATTCTCAAGGACATCTCACAGCGCGCATCT
GAGGGAAAGTTTCATTATAGTCGATTCTTTGCTATTGGACTTTTCAGGCTTGTTGAGAGG
GCGAATGCCACTGATCCGGCAGTTTTGGAGCAGCTCTCAAAAGAACTTAATGTCAGCAAA
TTGAGTGTTGATCGGGATCTTGATGTATACCGCAATTTGCTGT
■■Homology search results ■■ -
sp_hit_id Q84PB7
Definition sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica
Align length 228
Score (bit) 264.0
E-value 3.0e-70
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948702|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_A07, 5'
(703 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic... 264 3e-70
sp|Q7XAB8|THF1_SOLTU Protein THYLAKOID FORMATION1, chloroplastic... 261 2e-69
sp|Q9SKT0|THF1_ARATH Protein THYLAKOID FORMATION 1, chloroplasti... 257 4e-68
sp|B0C3M8|THF1_ACAM1 Protein thf1 OS=Acaryochloris marina (strai... 147 4e-35
sp|Q116P5|THF1_TRIEI Protein thf1 OS=Trichodesmium erythraeum (s... 131 4e-30
sp|Q8YZ41|THF1_ANASP Protein thf1 OS=Anabaena sp. (strain PCC 71... 130 7e-30
sp|Q3M4B2|THF1_ANAVT Protein thf1 OS=Anabaena variabilis (strain... 130 9e-30
sp|Q5N664|THF1_SYNP6 Protein thf1 OS=Synechococcus sp. (strain A... 120 9e-27
sp|Q31MY4|THF1_SYNE7 Protein thf1 OS=Synechococcus elongatus (st... 120 9e-27
sp|P73956|THF1_SYNY3 Protein thf1 OS=Synechocystis sp. (strain P... 115 3e-25
sp|Q7NKS7|THF1_GLOVI Protein thf1 OS=Gloeobacter violaceus GN=th... 110 1e-23
sp|P0C1D1|THF1_SYNJB Protein thf1 OS=Synechococcus sp. GN=thf1 P... 109 1e-23
sp|Q8DJT8|THF1_THEEB Protein thf1 OS=Thermosynechococcus elongat... 108 2e-23
sp|Q7V7R3|THF1_PROMM Protein thf1 OS=Prochlorococcus marinus (st... 106 1e-22
sp|Q2JSQ3|THF1_SYNJA Protein thf1 OS=Synechococcus sp. (strain J... 104 5e-22
sp|Q3AY05|THF1_SYNS9 Protein thf1 OS=Synechococcus sp. (strain C... 84 6e-16
sp|Q3AJN7|THF1_SYNSC Protein thf1 OS=Synechococcus sp. (strain C... 82 3e-15
sp|Q46L45|THF1_PROMT Protein thf1 OS=Prochlorococcus marinus (st... 79 2e-14
sp|A2C211|THF1_PROM1 Protein thf1 OS=Prochlorococcus marinus (st... 77 7e-14
sp|Q7U6N6|THF1_SYNPX Protein thf1 OS=Synechococcus sp. (strain W... 76 2e-13
sp|Q7VC23|THF1_PROMA Protein thf1 OS=Prochlorococcus marinus GN=... 73 1e-12
sp|A7I9P7|RNH2_METB6 Ribonuclease HII OS=Methanoregula boonei (s... 37 0.10
sp|Q9U489|LIN41_CAEEL Protein lin-41 OS=Caenorhabditis elegans G... 33 1.5
sp|A4R1D5|YME2_MAGGR Mitochondrial escape protein 2 OS=Magnaport... 32 3.3
sp|Q180Q8|UVRC_CLOD6 UvrABC system protein C OS=Clostridium diff... 32 4.4
sp|P0C6U2|R1A_CVH22 Replicase polyprotein 1a OS=Human coronaviru... 32 4.4
sp|P0C6X1|R1AB_CVH22 Replicase polyprotein 1ab OS=Human coronavi... 32 4.4
sp|Q8CTF5|Y528_STAES Uncharacterized membrane protein SE_0528 OS... 31 5.7
sp|Q5HQY3|Y413_STAEQ Uncharacterized membrane protein SERP0413 O... 31 5.7
sp|P19976|FRI1_SOYBN Ferritin-1, chloroplastic OS=Glycine max PE... 31 5.7

>sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic
OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1
Length = 287

Score = 264 bits (675), Expect = 3e-70
Identities = 134/228 (58%), Positives = 165/228 (72%), Gaps = 8/228 (3%)
Frame = +1

Query: 43 RVSTCNEVVLSSFHVRGLAAVAASYRP-------FRCVAATVHSVPTVADTKQAFITKFS 201
R + C ++ G AV S RP RCVA PTVA+TK F+ +
Sbjct: 14 RAADCRPSTAAAAAGAGAGAVVLSVRPRRGSRSVVRCVATAGDVPPTVAETKMNFLKSYK 73

Query: 202 RPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAIFKA 381
RPI SIY+ V+QEL+VQQHLMRY TY+YDAVFALGFVTVYDQLM+GYPS D++AIFKA
Sbjct: 74 RPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLMEGYPSNEDRDAIFKA 133

Query: 382 YIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGKFHY 558
YI AL EDPEQYR DA+++EEWA S+ ++ F S DGE+E ILKDIS+RA +G F Y
Sbjct: 134 YITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAILKDISERAQGKGSFSY 193

Query: 559 SRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702
SRFFA+GLFRL+E ANAT+P +L++L LN++K SVDRDLDVYRN+L
Sbjct: 194 SRFFAVGLFRLLELANATEPTILDKLCAALNINKRSVDRDLDVYRNIL 241


>sp|Q7XAB8|THF1_SOLTU Protein THYLAKOID FORMATION1, chloroplastic
OS=Solanum tuberosum GN=THF1 PE=2 SV=1
Length = 293

Score = 261 bits (668), Expect = 2e-69
Identities = 127/192 (66%), Positives = 156/192 (81%), Gaps = 1/192 (0%)
Frame = +1

Query: 130 CVAATVHSVPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALG 309
C +++ +PTVADTK F+T + RPIP++YN V+QELIVQQHL RY ++Y+YD VFALG
Sbjct: 57 CTSSSAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALG 116

Query: 310 FVTVYDQLMDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKS 489
FVTVYDQLM+GYPSE D+ AIFKAYIEALKEDPEQYR DA++LEEWA ++ A T+ F S
Sbjct: 117 FVTVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSS 176

Query: 490 GDGEVEVILKDISQRA-SEGKFHYSRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLS 666
+GE+E I KDI+QRA ++ F YSR FA+GLFRL+E AN TDP +LE+L LNV+K S
Sbjct: 177 KEGEIENIFKDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPTILEKLCAALNVNKKS 236

Query: 667 VDRDLDVYRNLL 702
VDRDLDVYRNLL
Sbjct: 237 VDRDLDVYRNLL 248


>sp|Q9SKT0|THF1_ARATH Protein THYLAKOID FORMATION 1, chloroplastic
OS=Arabidopsis thaliana GN=THF1 PE=1 SV=1
Length = 300

Score = 257 bits (657), Expect = 4e-68
Identities = 126/213 (59%), Positives = 164/213 (76%), Gaps = 1/213 (0%)
Frame = +1

Query: 67 VLSSFHVRGLAAVAASYRPFRCVAATVHSVPTVADTKQAFITKFSRPIPSIYNNVIQELI 246
+ + F L + + S C++ VP V++TK F+ + RPIPSIYN V+QELI
Sbjct: 35 ICTKFSRLSLNSRSTSKSLIHCMSNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELI 94

Query: 247 VQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAIFKAYIEALKEDPEQYRKD 426
VQQHLMRY +TY+YD VFALGFVTVYDQLM+GYPS+ D++AIFKAYIEAL EDP+QYR D
Sbjct: 95 VQQHLMRYKKTYRYDPVFALGFVTVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRID 154

Query: 427 AKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGKFHYSRFFAIGLFRLVERA 603
A+++EEWA S+T+ ++ F S +G++E +LKDI+ RA S+ F YSRFFA+GLFRL+E A
Sbjct: 155 AQKMEEWARSQTSASLVDFSSKEGDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELA 214

Query: 604 NATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702
+ATDP VL++L LN++K SVDRDLDVYRNLL
Sbjct: 215 SATDPTVLDKLCASLNINKKSVDRDLDVYRNLL 247


>sp|B0C3M8|THF1_ACAM1 Protein thf1 OS=Acaryochloris marina (strain
MBIC 11017) GN=thf1 PE=3 SV=1
Length = 247

Score = 147 bits (372), Expect = 4e-35
Identities = 82/198 (41%), Positives = 124/198 (62%), Gaps = 12/198 (6%)
Frame = +1

Query: 145 VHSVPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVY 324
++++ TV+DTK+AF + +RP+ S+Y V++EL+V+ HL+R N+ ++YD +FALG T +
Sbjct: 1 MNNLRTVSDTKRAFYSIHTRPVNSVYRRVVEELMVEMHLLRVNEDFRYDPIFALGVTTSF 60

Query: 325 DQLMDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSF-----KS 489
D+ MDGY E DK+AIF A +A + DP Q +KD +RL E A SK+AQ + + S
Sbjct: 61 DRFMDGYQPENDKDAIFSAICKAQEADPVQMKKDGQRLTELAQSKSAQEMLDWITQAANS 120

Query: 490 GDGEVEVILKDISQRASEGKFHYSRFFAIGLFRLVE--RANATD-----PAVLEQLSKEL 648
G E++ L++I+Q KF YSR FAIGLF L+E N T L + L
Sbjct: 121 GGDELQWQLRNIAQNP---KFKYSRLFAIGLFTLLELSEGNITQDEESLAEFLPNICTVL 177

Query: 649 NVSKLSVDRDLDVYRNLL 702
N+S+ + +DL++YR L
Sbjct: 178 NISESKLQKDLEIYRGNL 195


>sp|Q116P5|THF1_TRIEI Protein thf1 OS=Trichodesmium erythraeum
(strain IMS101) GN=thf1 PE=3 SV=1
Length = 239

Score = 131 bits (329), Expect = 4e-30
Identities = 72/192 (37%), Positives = 110/192 (57%), Gaps = 10/192 (5%)
Frame = +1

Query: 145 VHSVPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVY 324
+++ TV+DTK+ F +RPI SIYN VI+EL+V+ HL+ N Y Y+ +ALG VT +
Sbjct: 1 MNNTRTVSDTKKTFYHFHTRPINSIYNRVIEELLVEMHLISVNVDYSYNPFYALGVVTAF 60

Query: 325 DQLMDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSF---KSGD 495
D+ M GY + DK +IF A I+ +EDP +YR DAK LE+ A +A I S+
Sbjct: 61 DRFMQGYSPQEDKTSIFNALIQGQEEDPNKYRSDAKGLEDLAGKISASDILSWICLSKNI 120

Query: 496 GEVEVILKDISQRASEGKFHYSRFFAIGLFRLVE-------RANATDPAVLEQLSKELNV 654
+ + D+ + KF YSR FAIGLF L+E + L+++ + LN+
Sbjct: 121 DNTQYLQDDLRAISENSKFRYSRLFAIGLFTLLEIVDTELIKEQEKRTEALKKICQSLNL 180

Query: 655 SKLSVDRDLDVY 690
+ + +D+D+Y
Sbjct: 181 VEEKLLKDIDLY 192


>sp|Q8YZ41|THF1_ANASP Protein thf1 OS=Anabaena sp. (strain PCC 7120)
GN=thf1 PE=3 SV=1
Length = 233

Score = 130 bits (327), Expect = 7e-30
Identities = 71/194 (36%), Positives = 118/194 (60%), Gaps = 13/194 (6%)
Frame = +1

Query: 160 TVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMD 339
TV+DTK+ F +RPI +IY V++EL+V+ HL+ N + Y+ ++ALG VT +D+ M+
Sbjct: 6 TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFME 65

Query: 340 GYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKS------GDGE 501
GY E DKE+IF A +A++++P++YR+DA+RL+ A S + ++ S D +
Sbjct: 66 GYQPERDKESIFSAICQAVEQEPQRYRQDAERLQAVAQSLPVNDLVAWLSQANHLQQDAD 125

Query: 502 VEVILKDISQRASEGKFHYSRFFAIGLFRLVERAN-------ATDPAVLEQLSKELNVSK 660
++ L+ I A+ F YSR FAIGLF L+E++N L+ ++ L++S
Sbjct: 126 LQAQLQAI---ANNSNFKYSRLFAIGLFTLLEQSNPDLVKDEKQRTEALKSIAAGLHLSD 182

Query: 661 LSVDRDLDVYRNLL 702
+DL++YR+ L
Sbjct: 183 DKFSKDLELYRSNL 196


>sp|Q3M4B2|THF1_ANAVT Protein thf1 OS=Anabaena variabilis (strain
ATCC 29413 / PCC 7937) GN=thf1 PE=3 SV=1
Length = 233

Score = 130 bits (326), Expect = 9e-30
Identities = 72/194 (37%), Positives = 118/194 (60%), Gaps = 13/194 (6%)
Frame = +1

Query: 160 TVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMD 339
TV+DTK+ F +RPI +IY V++EL+V+ HL+ N + Y+ ++ALG VT +D+ M
Sbjct: 6 TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFMQ 65

Query: 340 GYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKS------GDGE 501
GY E DKE+IF A +A++++P++YR+DA+RL+ A S + ++ S D +
Sbjct: 66 GYQPERDKESIFSAICQAVEQEPQRYRQDAERLKAVAQSLPVNDLVAWLSQANHLQQDAD 125

Query: 502 VEVILKDISQRASEGKFHYSRFFAIGLFRLVERAN-------ATDPAVLEQLSKELNVSK 660
++ L+ I AS F YSR FAIGLF L+E++N L+ ++ L++S
Sbjct: 126 LQAQLQAI---ASNPNFKYSRLFAIGLFTLLEQSNPDLVKDEKQRTEALKTIAAGLHLSD 182

Query: 661 LSVDRDLDVYRNLL 702
+ +DL++YR+ L
Sbjct: 183 DKLSKDLELYRSNL 196


>sp|Q5N664|THF1_SYNP6 Protein thf1 OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=thf1 PE=3 SV=2
Length = 254

Score = 120 bits (300), Expect = 9e-27
Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 11/195 (5%)
Frame = +1

Query: 151 SVPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQ 330
SVPTV+D+K+AF + RPI +Y V++EL+V+ HL+ N ++ YD +FALG VT +D
Sbjct: 3 SVPTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDS 62

Query: 331 LMDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEW----ASSKTAQTITSFKSGDG 498
M Y +F A +A++++PEQYR DA + E S Q +T ++
Sbjct: 63 FMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEALGN 122

Query: 499 EVEVILKDISQRASEGKFHYSRFFAIGLFRLVERAN---ATDPAVLE----QLSKELNVS 657
E++ A +F YSR FAIGLF L+E A DP L+ +++ ++
Sbjct: 123 APELVRSSFQAIAGRSEFKYSRLFAIGLFSLLETAAPDLVQDPEALKTTVTAIAERFHLP 182

Query: 658 KLSVDRDLDVYRNLL 702
+ +DLD+YR+ L
Sbjct: 183 SDKLQKDLDLYRSNL 197


>sp|Q31MY4|THF1_SYNE7 Protein thf1 OS=Synechococcus elongatus
(strain PCC 7942) GN=thf1 PE=3 SV=2
Length = 254

Score = 120 bits (300), Expect = 9e-27
Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 11/195 (5%)
Frame = +1

Query: 151 SVPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQ 330
SVPTV+D+K+AF + RPI +Y V++EL+V+ HL+ N ++ YD +FALG VT +D
Sbjct: 3 SVPTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDS 62

Query: 331 LMDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEW----ASSKTAQTITSFKSGDG 498
M Y +F A +A++++PEQYR DA + E S Q +T ++
Sbjct: 63 FMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEALGN 122

Query: 499 EVEVILKDISQRASEGKFHYSRFFAIGLFRLVERAN---ATDPAVLE----QLSKELNVS 657
E++ A +F YSR FAIGLF L+E A DP L+ +++ ++
Sbjct: 123 APELVRSSFQAIAGRSEFKYSRLFAIGLFSLLETAAPDLVQDPEALKTTVTAIAERFHLP 182

Query: 658 KLSVDRDLDVYRNLL 702
+ +DLD+YR+ L
Sbjct: 183 SDKLQKDLDLYRSNL 197


>sp|P73956|THF1_SYNY3 Protein thf1 OS=Synechocystis sp. (strain PCC
6803) GN=thf1 PE=3 SV=1
Length = 240

Score = 115 bits (287), Expect = 3e-25
Identities = 75/202 (37%), Positives = 108/202 (53%), Gaps = 19/202 (9%)
Frame = +1

Query: 154 VPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQL 333
+ TV+D K+ F T +SRPI SIY ++EL+V+ HL+ N + YD +FALG VT ++
Sbjct: 4 IRTVSDAKRKFFTHYSRPISSIYRRFVEELLVEMHLLSVNIDFTYDPIFALGIVTSFNSF 63

Query: 334 MDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKR---------LEEWASSKTAQTITSFK 486
M GY AIF A + ++P+Q R+DAK L+ W ++ ++
Sbjct: 64 MQGYQPAEQLPAIFNALCHGVDQNPDQVRQDAKNVAASAHHIGLDAWVTAAASEQ----A 119

Query: 487 SGDGEVEVILKDISQRASEGKFHYSRFFAIGLFRLVERANATDPAV----------LEQL 636
SGD + L I QR KF YSR FAIGL+ L+ DP V L +L
Sbjct: 120 SGDNLLLNTLTGIHQR---HKFKYSRLFAIGLYTLLA---DQDPEVKDNDEKRQDYLTRL 173

Query: 637 SKELNVSKLSVDRDLDVYRNLL 702
S+ L++S V +DLD+YR+ L
Sbjct: 174 SELLDLSLDKVVKDLDLYRSNL 195


tr_hit_id A9NPI7
Definition tr|A9NPI7|A9NPI7_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 238
Score (bit) 293.0
E-value 1.0e-77
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948702|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_A07, 5'
(703 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NPI7|A9NPI7_PICSI Putative uncharacterized protein OS=Picea... 293 1e-77
tr|A9T683|A9T683_PHYPA Predicted protein OS=Physcomitrella paten... 272 1e-71
tr|A2YML2|A2YML2_ORYSI Putative uncharacterized protein OS=Oryza... 268 3e-70
tr|B4FEK7|B4FEK7_MAIZE Chloroplast-localized Ptr ToxA-binding pr... 266 7e-70
tr|A7Q395|A7Q395_VITVI Chromosome chr12 scaffold_47, whole genom... 266 7e-70
tr|A9SXF8|A9SXF8_PHYPA Predicted protein (Fragment) OS=Physcomit... 266 1e-69
tr|B6UAI2|B6UAI2_MAIZE Chloroplast-localized Ptr ToxA-binding pr... 265 2e-69
tr|Q0D5I3|Q0D5I3_ORYSJ Os07g0558500 protein OS=Oryza sativa subs... 264 4e-69
tr|Q5YL57|Q5YL57_WHEAT Chloroplast-localized Ptr ToxA-binding pr... 263 1e-68
tr|Q5XUV3|Q5XUV3_WHEAT Chloroplast inositol phosphatase-like pro... 263 1e-68
tr|A7XZB8|A7XZB8_NICBE Chloroplast-localized protein OS=Nicotian... 253 6e-66
tr|A8IXS3|A8IXS3_BRACM Chloroplast light-regulated protein OS=Br... 252 2e-65
tr|B7FJN0|B7FJN0_MEDTR Putative uncharacterized protein OS=Medic... 249 2e-64
tr|B7FIT6|B7FIT6_MEDTR Putative uncharacterized protein OS=Medic... 196 9e-49
tr|A8HR79|A8HR79_CHLRE Inositol phosphatase-like protein OS=Chla... 172 2e-41
tr|A0YRG1|A0YRG1_9CYAN Putative uncharacterized protein OS=Lyngb... 144 4e-33
tr|B7KI38|B7KI38_9CHRO Photosystem II biogenesis protein Psp29 O... 135 3e-30
tr|A4RUH3|A4RUH3_OSTLU Predicted protein (Fragment) OS=Ostreococ... 134 7e-30
tr|B4WPI2|B4WPI2_9SYNE Photosystem II biogenesis protein Psp29 O... 129 1e-28
tr|B4B360|B4B360_9CHRO Thf1-like protein OS=Cyanothece sp. PCC 7... 129 2e-28
tr|B2J353|B2J353_NOSP7 Putative uncharacterized protein OS=Nosto... 127 5e-28
tr|B8HQ62|B8HQ62_9CHRO Photosystem II biogenesis protein Psp29 O... 123 1e-26
tr|Q01CK9|Q01CK9_OSTTA Inositol phosphatase-like protein (ISS) O... 120 7e-26
tr|B0JTG0|B0JTG0_MICAN Psb29 Photosystem II sub-stoichiometric s... 117 6e-25
tr|B4C2B8|B4C2B8_9CHRO Thf1-like protein OS=Cyanothece sp. PCC 8... 117 9e-25
tr|A8YNG1|A8YNG1_MICAE Similar to tr|P73956|P73956 OS=Microcysti... 115 2e-24
tr|B1XHY6|B1XHY6_SYNP2 Putative uncharacterized protein OS=Synec... 114 5e-24
tr|B7K277|B7K277_SYNP8 Photosystem II biogenesis protein Psp29 O... 114 6e-24
tr|A3IRC2|A3IRC2_9CHRO Putative uncharacterized protein OS=Cyano... 114 6e-24
tr|B1WNF0|B1WNF0_CYAA5 Photosystem II 22 kD protein OS=Cyanothec... 113 1e-23

>tr|A9NPI7|A9NPI7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 304

Score = 293 bits (749), Expect = 1e-77
Identities = 152/238 (63%), Positives = 185/238 (77%), Gaps = 4/238 (1%)
Frame = +1

Query: 1 GLRAGTRSFDPCKLRVSTCNEVVLSSFHV--RGLAAVAASYRPFRC-VAATVHSVPTVAD 171
G+R F + R T ++ +L + ++ R L ++S RC ++ T +PTVA+
Sbjct: 25 GIRPSNNIFSSLRWRTITGHDQLLLTVNISSRSLPKASSSLSVTRCSMSITASDIPTVAE 84

Query: 172 TKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPS 351
TK AF+ + RPIPSIYNNVIQELIVQQHLMRY +TY+YDAVFALGFV+VYDQLMDGYPS
Sbjct: 85 TKSAFLKAYKRPIPSIYNNVIQELIVQQHLMRYKRTYQYDAVFALGFVSVYDQLMDGYPS 144

Query: 352 EADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQ 531
+ D EAIF+AYI ALKEDPEQYR DAK+LEEWASS+ A++I F+S DGEVE ILKDI++
Sbjct: 145 DGDSEAIFRAYINALKEDPEQYRSDAKKLEEWASSQDAKSIVEFQSRDGEVEGILKDIAE 204

Query: 532 RASEGK-FHYSRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702
RA E K F YSRFFAIGLFRL+ERANATDP VLE+L LN+SK SVDRDLD+YRN+L
Sbjct: 205 RAREKKIFSYSRFFAIGLFRLLERANATDPVVLEKLCGALNISKPSVDRDLDIYRNIL 262


>tr|A9T683|A9T683_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_140925 PE=4 SV=1
Length = 215

Score = 272 bits (696), Expect = 1e-71
Identities = 135/184 (73%), Positives = 157/184 (85%), Gaps = 1/184 (0%)
Frame = +1

Query: 154 VPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQL 333
VPTVADTK +FI + +PIPSIY+NVIQEL+VQQHLMRYN TY YD +FALGFVTVYDQL
Sbjct: 6 VPTVADTKLSFIKSYRKPIPSIYSNVIQELLVQQHLMRYNSTYVYDPIFALGFVTVYDQL 65

Query: 334 MDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVI 513
MDGYP++ D++AIFKAYI AL EDPEQYRKD+K+LEEWA++++ I F DGEVE
Sbjct: 66 MDGYPNDEDRDAIFKAYISALNEDPEQYRKDSKKLEEWAAAQSGSGIADFAGKDGEVEAA 125

Query: 514 LKDISQRAS-EGKFHYSRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVY 690
LKDI++RA+ + KFHYSRFFAIGLFRL+E A A+DPAVLE LSK LNVSK SVDRDLDVY
Sbjct: 126 LKDIAERAAGKEKFHYSRFFAIGLFRLLECAKASDPAVLETLSKALNVSKRSVDRDLDVY 185

Query: 691 RNLL 702
RNLL
Sbjct: 186 RNLL 189


>tr|A2YML2|A2YML2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_26464 PE=4 SV=1
Length = 287

Score = 268 bits (685), Expect = 3e-70
Identities = 135/228 (59%), Positives = 166/228 (72%), Gaps = 8/228 (3%)
Frame = +1

Query: 43 RVSTCNEVVLSSFHVRGLAAVAASYRP-------FRCVAATVHSVPTVADTKQAFITKFS 201
R + C ++ G AV S RP RCVA PTVA+TK F+ +
Sbjct: 14 RAADCRPSTAAAAAGAGAGAVVLSVRPRRGSRSVVRCVATAGDVPPTVAETKMNFLKSYK 73

Query: 202 RPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAIFKA 381
RPIPSIY+ V+QEL+VQQHLMRY TY+YDAVFALGFVTVYDQLM+GYPS D++AIFKA
Sbjct: 74 RPIPSIYSTVLQELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLMEGYPSNEDRDAIFKA 133

Query: 382 YIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGKFHY 558
YI AL EDPEQYR DA+++EEWA S+ ++ F S DGE+E ILKDIS+RA +G F Y
Sbjct: 134 YITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAILKDISERAQGKGSFSY 193

Query: 559 SRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702
SRFFA+GLFRL+E ANAT+P +L++L LN++K SVDRDLDVYRN+L
Sbjct: 194 SRFFAVGLFRLLELANATEPTILDKLCAALNINKRSVDRDLDVYRNIL 241


>tr|B4FEK7|B4FEK7_MAIZE Chloroplast-localized Ptr ToxA-binding
protein1 OS=Zea mays PE=2 SV=1
Length = 284

Score = 266 bits (681), Expect = 7e-70
Identities = 136/231 (58%), Positives = 169/231 (73%), Gaps = 1/231 (0%)
Frame = +1

Query: 13 GTRSFDPCKLRVSTCNEVVLSSFHVRGLAAVAASYRPFRCVAATVHSVPTVADTKQAFIT 192
G + P + VVLS+ RG +V RCVA T PTVA+TK F+
Sbjct: 14 GAAEWRPSSTAAAVSGAVVLSARSRRGSRSVV------RCVATTGDVPPTVAETKLNFLK 67

Query: 193 KFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAI 372
+ RPIPSIY+ V+QEL+VQQHLMRY +TY+YDAVFALGFVTVYDQLM+GYPS D+++I
Sbjct: 68 SYKRPIPSIYSAVLQELLVQQHLMRYKKTYQYDAVFALGFVTVYDQLMEGYPSNEDRDSI 127

Query: 373 FKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGK 549
FKAYI AL EDP+QYR DA ++EEWA S+ ++ F S DGE+E ILKDIS+RA +G
Sbjct: 128 FKAYITALNEDPDQYRADALKMEEWARSQNGSSLVDFSSRDGEIEAILKDISERAKGKGN 187

Query: 550 FHYSRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702
F YSRFFA+GLFRL+E +NAT+P +L++L LNVSK SVDRDLDVYRN+L
Sbjct: 188 FSYSRFFAVGLFRLLELSNATEPTILDKLCAALNVSKRSVDRDLDVYRNIL 238


>tr|A7Q395|A7Q395_VITVI Chromosome chr12 scaffold_47, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029202001
PE=4 SV=1
Length = 297

Score = 266 bits (681), Expect = 7e-70
Identities = 132/207 (63%), Positives = 168/207 (81%), Gaps = 1/207 (0%)
Frame = +1

Query: 85 VRGLAAVAASYRPFRCVAATVHSVPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLM 264
VR ++ ++S +C+++ V VPTV++TK F+ + RPIPSIYN ++QEL+VQQHLM
Sbjct: 46 VRSSSSSSSSRMVVQCMSS-VTDVPTVSETKMNFLKNYKRPIPSIYNTLLQELMVQQHLM 104

Query: 265 RYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEE 444
RY +TY+YDAVFALGFVTVYDQLMDGYPS+ D++ IF+ YI+AL+EDPEQYRKDA+ LEE
Sbjct: 105 RYKRTYRYDAVFALGFVTVYDQLMDGYPSDEDRDIIFQVYIKALREDPEQYRKDAQMLEE 164

Query: 445 WASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGKFHYSRFFAIGLFRLVERANATDPA 621
WA S+TA ++ F S +GEVE ILKDI++RA +G F YSRFFAIGLFRL+E ANAT+P
Sbjct: 165 WARSQTASSLVEFSSKEGEVEGILKDIAERAGGKGSFSYSRFFAIGLFRLLELANATEPT 224

Query: 622 VLEQLSKELNVSKLSVDRDLDVYRNLL 702
+LE+L N+SK SVDRDLDVYRNLL
Sbjct: 225 ILEKLCAAFNISKRSVDRDLDVYRNLL 251


>tr|A9SXF8|A9SXF8_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_136845 PE=4 SV=1
Length = 205

Score = 266 bits (679), Expect = 1e-69
Identities = 132/184 (71%), Positives = 155/184 (84%), Gaps = 1/184 (0%)
Frame = +1

Query: 154 VPTVADTKQAFITKFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQL 333
VPTV++TK +FI + +PIPSIY+NVIQEL+VQQHLMRYN TY YD +FALGFVTVYDQL
Sbjct: 6 VPTVSETKASFIKSYRKPIPSIYSNVIQELLVQQHLMRYNSTYTYDPIFALGFVTVYDQL 65

Query: 334 MDGYPSEADKEAIFKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVI 513
MDGYP D+++IF AYI AL EDP +YR+DAK+LEEWAS+++A IT F S DGEVE
Sbjct: 66 MDGYPDATDRDSIFTAYINALNEDPVKYREDAKKLEEWASAQSASGITDFTSRDGEVEAT 125

Query: 514 LKDISQRA-SEGKFHYSRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVY 690
LK I++RA S+ KFHYSRFFAIGLFRL+E A A+DPAVLE LSK LNV+K SVDRDLDVY
Sbjct: 126 LKSIAERAGSKDKFHYSRFFAIGLFRLLECAKASDPAVLESLSKALNVNKRSVDRDLDVY 185

Query: 691 RNLL 702
RNLL
Sbjct: 186 RNLL 189


>tr|B6UAI2|B6UAI2_MAIZE Chloroplast-localized Ptr ToxA-binding
protein1 OS=Zea mays PE=2 SV=1
Length = 284

Score = 265 bits (677), Expect = 2e-69
Identities = 136/231 (58%), Positives = 168/231 (72%), Gaps = 1/231 (0%)
Frame = +1

Query: 13 GTRSFDPCKLRVSTCNEVVLSSFHVRGLAAVAASYRPFRCVAATVHSVPTVADTKQAFIT 192
G + P + VVLS+ RG +V RCVA T PTVA+TK F+
Sbjct: 14 GAAEWRPSSTAAAVSGAVVLSARSRRGSCSVV------RCVATTGDVPPTVAETKLNFLK 67

Query: 193 KFSRPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAI 372
+ RPIPSIY+ V+QEL+VQQHLMRY +TY+YDAVFALGFVTVYDQLM+ YPS DK++I
Sbjct: 68 SYKRPIPSIYSAVLQELLVQQHLMRYKKTYQYDAVFALGFVTVYDQLMERYPSNEDKDSI 127

Query: 373 FKAYIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGK 549
FKAYI AL EDP+QYR DA ++EEWA S+ ++ F S DGE+E ILKDIS+RA +G
Sbjct: 128 FKAYITALNEDPDQYRADALKMEEWARSQNGSSLVDFSSRDGEIEAILKDISERAKGKGN 187

Query: 550 FHYSRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702
F YSRFFA+GLFRL+E +NAT+P +L++L LNVSK SVDRDLDVYRN+L
Sbjct: 188 FSYSRFFAVGLFRLLELSNATEPTILDKLCAALNVSKRSVDRDLDVYRNIL 238


>tr|Q0D5I3|Q0D5I3_ORYSJ Os07g0558500 protein OS=Oryza sativa subsp.
japonica GN=Os07g0558500 PE=2 SV=1
Length = 287

Score = 264 bits (675), Expect = 4e-69
Identities = 134/228 (58%), Positives = 165/228 (72%), Gaps = 8/228 (3%)
Frame = +1

Query: 43 RVSTCNEVVLSSFHVRGLAAVAASYRP-------FRCVAATVHSVPTVADTKQAFITKFS 201
R + C ++ G AV S RP RCVA PTVA+TK F+ +
Sbjct: 14 RAADCRPSTAAAAAGAGAGAVVLSVRPRRGSRSVVRCVATAGDVPPTVAETKMNFLKSYK 73

Query: 202 RPIPSIYNNVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAIFKA 381
RPI SIY+ V+QEL+VQQHLMRY TY+YDAVFALGFVTVYDQLM+GYPS D++AIFKA
Sbjct: 74 RPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLMEGYPSNEDRDAIFKA 133

Query: 382 YIEALKEDPEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGKFHY 558
YI AL EDPEQYR DA+++EEWA S+ ++ F S DGE+E ILKDIS+RA +G F Y
Sbjct: 134 YITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAILKDISERAQGKGSFSY 193

Query: 559 SRFFAIGLFRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702
SRFFA+GLFRL+E ANAT+P +L++L LN++K SVDRDLDVYRN+L
Sbjct: 194 SRFFAVGLFRLLELANATEPTILDKLCAALNINKRSVDRDLDVYRNIL 241


>tr|Q5YL57|Q5YL57_WHEAT Chloroplast-localized Ptr ToxA-binding
protein1 OS=Triticum aestivum GN=TaThf1 PE=2 SV=1
Length = 286

Score = 263 bits (671), Expect = 1e-68
Identities = 134/220 (60%), Positives = 164/220 (74%), Gaps = 1/220 (0%)
Frame = +1

Query: 46 VSTCNEVVLSSFHVRGLAAVAASYRPFRCVAATVHSVPTVADTKQAFITKFSRPIPSIYN 225
VS V+L++ RG +V RCVA PTVADTK F+ + RPIPSIY+
Sbjct: 27 VSVSGGVMLNARARRGSRSVV------RCVATAGDIPPTVADTKMNFLKSYKRPIPSIYS 80

Query: 226 NVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAIFKAYIEALKED 405
V+QEL+VQQHLMRY TY+YD VFALGFVTVYDQLM+GYPS D++AIFK+Y+ AL ED
Sbjct: 81 TVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLMEGYPSTEDRDAIFKSYVTALNED 140

Query: 406 PEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGKFHYSRFFAIGL 582
PEQYR DA+R+EEWA S+ + F S DGE+E ILKDIS+RA +G F YSRFFA+GL
Sbjct: 141 PEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESILKDISERAQGKGNFSYSRFFAVGL 200

Query: 583 FRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702
FRL+E +NAT+P VL++L LN++K SVDRDLDVYRNLL
Sbjct: 201 FRLLELSNATEPTVLDKLCAALNINKKSVDRDLDVYRNLL 240


>tr|Q5XUV3|Q5XUV3_WHEAT Chloroplast inositol phosphatase-like
protein OS=Triticum aestivum PE=2 SV=1
Length = 286

Score = 263 bits (671), Expect = 1e-68
Identities = 134/220 (60%), Positives = 164/220 (74%), Gaps = 1/220 (0%)
Frame = +1

Query: 46 VSTCNEVVLSSFHVRGLAAVAASYRPFRCVAATVHSVPTVADTKQAFITKFSRPIPSIYN 225
VS V+L++ RG +V RCVA PTVADTK F+ + RPIPSIY+
Sbjct: 27 VSVSGGVMLNARARRGSRSVV------RCVATAGDIPPTVADTKMNFLKSYKRPIPSIYS 80

Query: 226 NVIQELIVQQHLMRYNQTYKYDAVFALGFVTVYDQLMDGYPSEADKEAIFKAYIEALKED 405
V+QEL+VQQHLMRY TY+YD VFALGFVTVYDQLM+GYPS D++AIFK+Y+ AL ED
Sbjct: 81 TVLQELLVQQHLMRYKSTYQYDPVFALGFVTVYDQLMEGYPSTEDRDAIFKSYVTALNED 140

Query: 406 PEQYRKDAKRLEEWASSKTAQTITSFKSGDGEVEVILKDISQRA-SEGKFHYSRFFAIGL 582
PEQYR DA+R+EEWA S+ + F S DGE+E ILKDIS+RA +G F YSRFFA+GL
Sbjct: 141 PEQYRADAQRMEEWARSQNGNLLVEFSSRDGEIESILKDISERAQGKGNFSYSRFFAVGL 200

Query: 583 FRLVERANATDPAVLEQLSKELNVSKLSVDRDLDVYRNLL 702
FRL+E +NAT+P VL++L LN++K SVDRDLDVYRNLL
Sbjct: 201 FRLLELSNATEPTVLDKLCAALNINKKSVDRDLDVYRNLL 240