DK948716 |
Clone id |
TST38A01NGRL0004_A21 |
Library |
TST38 |
Length |
696 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_A21. 5' end sequence. |
Accession |
DK948716 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL30Contig1 |
Sequence |
CCACCTCCCCTGCCCCAGATCACATCAATTGCTCCTCTCCTTTCGCCAAATTCTCGGGTC TCAAGCTAGCCTCCTCCCCGCTTCCTTCCCACCACACCCAAGAGAAGAAGAAGAGAAGCA GTGGCAGCAGGAAGGCGCATCATGTCACTGCAACGGCAGCCGTGGAGGCTCCCCCCAAGA CCGATGTCTCGTTGGTGGAGAAGAGCATCAATACTATCCGATTCTTGGCCGTTGATGCAG TTGAGAAGGCTAACTCTGGACACCCAGGTCTTCCCATGGGGTGTGCTCCGATGGGCCACA TTCTGTATGACGAGATCATGAGATACAACCCAAAAAATCCCTATTGGTTCAATCGCGACA GGTTCGTCCTTTCTGCGGGCCATGGTTGCATGTTGCAGTATGCACTTCTTCATCTTGCCG GCTACGACAGCGTCCAGGAGGAAGATCTGAAGCAATTCAGGCAATGGGAGAGCCGAACTC CTGGGCATCCTGAAAACTTTGAGACGCCTGGTGTGGAGGTTACTACAGGGCCCCTTGGCC AAGGTATTTGCAATGCCGTTGGATTAGCTCTGGCCGAGAAGCACCTGGCTGCCCGCTTCA ACAAGCCAGATGCCACTGTTGTGGATCACTACACGTACTGTATTGTGGGAGATGGGTGCA ACATGGAGGGCGTGTCAAATGAAGCATGCTCTCTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q43848 |
Definition |
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum |
Align length |
221 |
Score (bit) |
338.0 |
E-value |
2.0e-92 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948716|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_A21, 5' (696 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 338 2e-92 sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 334 2e-91 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 330 4e-90 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 313 4e-85 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 291 2e-78 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 284 3e-76 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 225 2e-58 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 221 3e-57 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 221 4e-57 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 221 4e-57 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 220 5e-57 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 220 5e-57 sp|P33570|TKT2_ECOLI Transketolase 2 OS=Escherichia coli (strain... 218 2e-56 sp|Q8KA26|TKT_BUCAP Transketolase OS=Buchnera aphidicola subsp. ... 218 3e-56 sp|P27302|TKT1_ECOLI Transketolase 1 OS=Escherichia coli (strain... 216 7e-56 sp|P34736|TKT_PICST Transketolase OS=Pichia stipitis GN=TKT PE=3... 216 9e-56 sp|P21725|TKTC_RALEH Transketolase, chromosomal OS=Ralstonia eut... 216 1e-55 sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae... 216 1e-55 sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=t... 214 3e-55 sp|Q9KLW7|TKT2_VIBCH Transketolase 2 OS=Vibrio cholerae GN=tkt2 ... 214 3e-55 sp|Q9KUP2|TKT1_VIBCH Transketolase 1 OS=Vibrio cholerae GN=tkt1 ... 214 3e-55 sp|O83571|TKT_TREPA Transketolase OS=Treponema pallidum GN=tkt P... 214 4e-55 sp|Q89AY2|TKT_BUCBP Transketolase OS=Buchnera aphidicola subsp. ... 214 4e-55 sp|Q8DCA2|TKT1_VIBVU Transketolase 1 OS=Vibrio vulnificus GN=tkt... 213 6e-55 sp|P21726|TKTP_RALEH Transketolase, plasmid OS=Ralstonia eutroph... 213 1e-54 sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TK... 212 2e-54 sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT... 211 2e-54 sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=... 211 2e-54 sp|P57195|TKT_BUCAI Transketolase OS=Buchnera aphidicola subsp. ... 211 4e-54 sp|Q7MDD4|TKT2_VIBVY Transketolase 2 OS=Vibrio vulnificus (strai... 210 5e-54
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 338 bits (866), Expect = 2e-92 Identities = 163/221 (73%), Positives = 181/221 (81%) Frame = +3
Query: 33 SSPFAKFSGLKLASSPLPSHHTQEKKKRSSGSRXXXXXXXXXXXXXXXXTDVSLVEKSIN 212 S F+ FSGLK S+P S H + ++ ++ TD ++VEKS+N Sbjct: 30 SLSFSTFSGLK--STPFTSSHRRILPS-TTVTKQQFSVRASAAVETLEKTDAAIVEKSVN 86
Query: 213 TIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGCM 392 TIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDE+M+YNPKNPYWFNRDRFVLSAGHGCM Sbjct: 87 TIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCM 146
Query: 393 LQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVGLAL 572 LQYALLHLAGYDSVQE+DLK FRQW SR PGHPENFETPGVEVTTGPLGQGI NAVGLA+ Sbjct: 147 LQYALLHLAGYDSVQEDDLKSFRQWGSRIPGHPENFETPGVEVTTGPLGQGIANAVGLAV 206
Query: 573 AEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSL 695 AEKHLAARFNKPDA +VDHYTY I+GDGC MEG+SNE CSL Sbjct: 207 AEKHLAARFNKPDAEIVDHYTYVILGDGCQMEGISNEVCSL 247
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 334 bits (857), Expect = 2e-91 Identities = 152/168 (90%), Positives = 163/168 (97%) Frame = +3
Query: 192 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 371 L+EKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGH+LYDE+MRYNPKNPYWFNRDRFVL Sbjct: 15 LLEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVL 74
Query: 372 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 551 SAGHGCMLQYALLHLAGYDSV+EEDLKQFRQW SRTPGHPENFETPGVEVTTGPLGQGI Sbjct: 75 SAGHGCMLQYALLHLAGYDSVKEEDLKQFRQWGSRTPGHPENFETPGVEVTTGPLGQGIA 134
Query: 552 NAVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSL 695 NAVGLALAEKHLAARFNKPD+ +VDHYTY I+GDGC MEG++NEACSL Sbjct: 135 NAVGLALAEKHLAARFNKPDSEIVDHYTYVILGDGCQMEGIANEACSL 182
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 330 bits (846), Expect = 4e-90 Identities = 155/173 (89%), Positives = 162/173 (93%), Gaps = 1/173 (0%) Frame = +3
Query: 180 TDVS-LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 356 TD+ LVEKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR Sbjct: 75 TDIDQLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 134
Query: 357 DRFVLSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPL 536 DRFVLSAGHGCMLQYALLHLAGYDSV EEDLK FRQW SR PGHPENFETPGVEVTTGPL Sbjct: 135 DRFVLSAGHGCMLQYALLHLAGYDSVLEEDLKTFRQWGSRIPGHPENFETPGVEVTTGPL 194
Query: 537 GQGICNAVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSL 695 GQGI NAVGLALAEKHLAARFNKPDA +VDHYTY I+GDGC MEG++ EACSL Sbjct: 195 GQGIANAVGLALAEKHLAARFNKPDAEIVDHYTYVILGDGCQMEGIAQEACSL 247
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 313 bits (803), Expect = 4e-85 Identities = 143/168 (85%), Positives = 155/168 (92%) Frame = +3
Query: 192 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 371 LV KS+NTIRFLA+DAVEKA SGHPG+PMGCAPMGH+LYDE MR+NPKNPYWFNRDRFVL Sbjct: 13 LVSKSVNTIRFLAIDAVEKAKSGHPGMPMGCAPMGHVLYDEFMRFNPKNPYWFNRDRFVL 72
Query: 372 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 551 SAGHGCMLQYALLHL+GYDSV+EEDLK RQW SRTP HPENFETPGVEVTTGPLGQGI Sbjct: 73 SAGHGCMLQYALLHLSGYDSVKEEDLKSLRQWGSRTPAHPENFETPGVEVTTGPLGQGIA 132
Query: 552 NAVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSL 695 +AVGLA+AEKHLAAR+NKP +VDHYTY I+GDGC MEGVSNEACSL Sbjct: 133 SAVGLAVAEKHLAARYNKPGFEIVDHYTYVILGDGCQMEGVSNEACSL 180
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 291 bits (745), Expect = 2e-78 Identities = 133/168 (79%), Positives = 148/168 (88%) Frame = +3
Query: 192 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 371 LV KS+NTIRFLA+DAVE SGHPG+PMGCAPMGH+L+DE M++NPKNPYWFNRDRFVL Sbjct: 17 LVVKSVNTIRFLAIDAVENVKSGHPGMPMGCAPMGHVLFDEFMKFNPKNPYWFNRDRFVL 76
Query: 372 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 551 SAGHG ML Y LLHLAGYDSV+ EDLK RQW S+TP HPENFETPGVEVTTGPLGQG+ Sbjct: 77 SAGHGAMLLYGLLHLAGYDSVKVEDLKGLRQWGSKTPAHPENFETPGVEVTTGPLGQGVG 136
Query: 552 NAVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSL 695 +AVGLALAEKHL AR+NKPD +VDHYTY I+GDGC MEG+SNEA SL Sbjct: 137 SAVGLALAEKHLGARYNKPDFEMVDHYTYMILGDGCQMEGISNEASSL 184
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 284 bits (727), Expect = 3e-76 Identities = 134/168 (79%), Positives = 145/168 (86%) Frame = +3
Query: 189 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 368 SL E SIN IRFLAVDA+EKA SGHPGLPMG APM +L++ MRYNPKNP WFNRDRFV Sbjct: 7 SLEELSINAIRFLAVDAIEKAKSGHPGLPMGAAPMAFVLWNRFMRYNPKNPKWFNRDRFV 66
Query: 369 LSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGI 548 LSAGHG MLQYALL+L GYDSV ED+KQFRQWES+TPGHPENF T GVEVTTGPLGQGI Sbjct: 67 LSAGHGSMLQYALLYLTGYDSVSIEDIKQFRQWESKTPGHPENFMTAGVEVTTGPLGQGI 126
Query: 549 CNAVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACS 692 N VGLA+AE HLAA+FNKPDA +VDHYTY I+GDGCNMEGVS EA S Sbjct: 127 ANGVGLAIAEAHLAAKFNKPDAKIVDHYTYVILGDGCNMEGVSGEAAS 174
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 225 bits (574), Expect = 2e-58 Identities = 107/164 (65%), Positives = 128/164 (78%) Frame = +3
Query: 204 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGH 383 ++NTIR L++D+VEKANSGHPG+PMG APM L+ + M +NP NP W NRDRFVLSAGH Sbjct: 9 AVNTIRTLSIDSVEKANSGHPGMPMGAAPMAFCLWTKFMNHNPANPDWVNRDRFVLSAGH 68
Query: 384 GCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVG 563 G ML Y+LLHL GYD + E+L+ FRQW S+TPGHPE TPGVE TTGPLGQG+ AVG Sbjct: 69 GSMLLYSLLHLTGYD-LSLEELQNFRQWGSKTPGHPEYGHTPGVEATTGPLGQGVAMAVG 127
Query: 564 LALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSL 695 +A+AE+HLAA +N+ +VDHYTY I GDG MEGVS EA SL Sbjct: 128 MAMAERHLAATYNRDGYNIVDHYTYTICGDGDLMEGVSAEAASL 171
>sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=2 Length = 667
Score = 221 bits (563), Expect = 3e-57 Identities = 105/169 (62%), Positives = 131/169 (77%) Frame = +3
Query: 189 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 368 ++ +KS+ TIR L++DA+EKANSGHPG+PMG APM + L+ + M +P NP WFNRDRFV Sbjct: 3 TIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFV 62
Query: 369 LSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGI 548 LSAGHG L Y++LHL+G+D + EDLK FRQW S+TPGHPE T GV+ TTGPLGQGI Sbjct: 63 LSAGHGSALLYSMLHLSGFD-LSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGI 121
Query: 549 CNAVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSL 695 AVG+A+AE+HLA +N+ VVDHYTY I GDG MEG+S+EA SL Sbjct: 122 AMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLMEGISSEAASL 170
>sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN=tktB PE=3 SV=1 Length = 668
Score = 221 bits (562), Expect = 4e-57 Identities = 103/162 (63%), Positives = 128/162 (79%) Frame = +3
Query: 210 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGC 389 N IRFL++DAV+KA SGHPG PMG A + +L+ + +++NP NP+W +RDRF+LS GHG Sbjct: 9 NAIRFLSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPSNPHWADRDRFILSNGHGS 68
Query: 390 MLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVGLA 569 ML Y+LLHL+GYD + EDLKQFRQ S+TPGHPE PGVE TTGPLGQGI NAVG A Sbjct: 69 MLIYSLLHLSGYD-LSIEDLKQFRQLHSKTPGHPEYGYAPGVETTTGPLGQGITNAVGFA 127
Query: 570 LAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSL 695 +AEK LA +FN+P +VDH+TY +GDGC MEG+S+EACSL Sbjct: 128 IAEKTLAHQFNRPGHEIVDHHTYVFLGDGCLMEGISHEACSL 169
>sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN=tktA PE=3 SV=1 Length = 668
Score = 221 bits (562), Expect = 4e-57 Identities = 103/162 (63%), Positives = 128/162 (79%) Frame = +3
Query: 210 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGC 389 N IRFL++DAV+KA SGHPG PMG A + +L+ + +++NP NP+W +RDRF+LS GHG Sbjct: 9 NAIRFLSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPSNPHWADRDRFILSNGHGS 68
Query: 390 MLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVGLA 569 ML Y+LLHL+GYD + EDLKQFRQ S+TPGHPE PGVE TTGPLGQGI NAVG A Sbjct: 69 MLIYSLLHLSGYD-LSIEDLKQFRQLHSKTPGHPEYGYAPGVETTTGPLGQGITNAVGFA 127
Query: 570 LAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSL 695 +AEK LA +FN+P +VDH+TY +GDGC MEG+S+EACSL Sbjct: 128 IAEKTLAHQFNRPGHEIVDHHTYVFLGDGCLMEGISHEACSL 169
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P7Z7 |
Definition |
tr|A9P7Z7|A9P7Z7_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
215 |
Score (bit) |
343.0 |
E-value |
5.0e-93 |
Report |
|