DK948720 |
Clone id |
TST38A01NGRL0004_B02 |
Library |
TST38 |
Length |
687 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_B02. 5' end sequence. |
Accession |
DK948720 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL84Contig2 |
Sequence |
GCTGTTTACGAGCTCCTTCACGTAACCATGTCTGGCAAGAGGAAGACCAAAGAGGTGAAG GAAGAGAATGTTACTCTCAGTGGACCTGGTGCTCGTGACGGCGAGCACGTCTTTGGAGTA GCACATATTTTTGCCTCATTCAATGACACCTTCGTGCATGTCACAGATCTGTCTGGCAAG GAGACGCTTGCTCGAGTTACTGGTGGCATGAAGGTGAAAGCTGACAGAGACGAGTCTTCT CCGTACGCAGCCATGCTTGCTGCTCAGGATGTGGCGCAGAAGTGCAAGGAGCTGGGGATC ACCGCTCTGCACATCAAGCTGCGAGCAACTGGGGGTAACAAGACGAAGACGCCTGGTCCT GGCGCACAGTCTGCACTGAGAGCACTTGCTCGGTCTGGCATGCGGATTGGACGAATTGAG GATGTCACACCTATCCCCACAGACAGCACAAGAAGGAAAGGTGGTAGAAGAGGTCGCCGG CTGTAAGGACAGCTGTAGACGCGATTGGATTTTCTTTGAACTATCTTTGCTTAAGGATGA ATGTTTTTGTTCACTCAAGCGAGCCTGAGGTAGACGTCCTAGCTCCAATGGAACTTGTTA TGATTGGATTATTGCAATAGGCAAGTTTGGAAATTTTTGCTGAAGAGTCATGTTGGTTTT GGTTAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P19951 |
Definition |
sp|P19951|RS142_MAIZE 40S ribosomal protein S14 OS=Zea mays |
Align length |
141 |
Score (bit) |
219.0 |
E-value |
8.0e-57 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TTN2 |
Definition |
tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
141 |
Score (bit) |
226.0 |
E-value |
8.0e-58 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948720|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_B02, 5' (664 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella paten... 226 8e-58 tr|A9TNC8|A9TNC8_PHYPA Predicted protein OS=Physcomitrella paten... 224 4e-57 tr|B4FKA4|B4FKA4_MAIZE Putative uncharacterized protein OS=Zea m... 224 5e-57 tr|A7PPA9|A7PPA9_VITVI Chromosome chr8 scaffold_23, whole genome... 223 1e-56 tr|B8LN86|B8LN86_PICSI Putative uncharacterized protein OS=Picea... 221 2e-56 tr|Q7XSA6|Q7XSA6_ORYSJ Os02g0534800 protein OS=Oryza sativa subs... 221 4e-56 tr|Q01IS6|Q01IS6_ORYSA OSIGBa0134P10.10 protein (OSIGBa0137L20.1... 221 4e-56 tr|A9PDW2|A9PDW2_POPTR Putative uncharacterized protein OS=Popul... 221 4e-56 tr|A7QQP3|A7QQP3_VITVI Chromosome undetermined scaffold_143, who... 221 4e-56 tr|A2XT84|A2XT84_ORYSI Putative uncharacterized protein OS=Oryza... 221 4e-56 tr|B3TM39|B3TM39_ELAGV Ribosomal protein S14 OS=Elaeis guineensi... 219 1e-55 tr|A7QF89|A7QF89_VITVI Chromosome undetermined scaffold_87, whol... 219 1e-55 tr|A5AX94|A5AX94_VITVI Putative uncharacterized protein OS=Vitis... 219 1e-55 tr|A9PBW7|A9PBW7_POPTR Putative uncharacterized protein OS=Popul... 219 2e-55 tr|A9P8E9|A9P8E9_POPTR Putative uncharacterized protein OS=Popul... 219 2e-55 tr|A3ATP4|A3ATP4_ORYSJ Putative uncharacterized protein OS=Oryza... 219 2e-55 tr|A9PDF0|A9PDF0_POPTR Putative uncharacterized protein OS=Popul... 218 2e-55 tr|A9PIB5|A9PIB5_POPTR Putative uncharacterized protein OS=Popul... 218 3e-55 tr|Q6H7T1|Q6H7T1_ORYSJ Os02g0162500 protein OS=Oryza sativa subs... 217 5e-55 tr|B8AI71|B8AI71_ORYSI Putative uncharacterized protein OS=Oryza... 217 5e-55 tr|B4FJ48|B4FJ48_MAIZE Putative uncharacterized protein OS=Zea m... 217 6e-55 tr|B4FBS3|B4FBS3_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 217 6e-55 tr|B8LKR8|B8LKR8_PICSI Putative uncharacterized protein OS=Picea... 216 8e-55 tr|B6UH09|B6UH09_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 216 8e-55 tr|B6T522|B6T522_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 216 1e-54 tr|B6T281|B6T281_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 215 2e-54 tr|Q84X98|Q84X98_BRANA Cytoplasmic ribosomal protein S14 OS=Bras... 214 5e-54 tr|B6UHC8|B6UHC8_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 213 7e-54 tr|Q1H555|Q1H555_ARATH At3g11510 OS=Arabidopsis thaliana PE=2 SV=1 212 1e-53 tr|A3A7N0|A3A7N0_ORYSJ Putative uncharacterized protein OS=Oryza... 212 1e-53
>tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_198161 PE=3 SV=1 Length = 151
Score = 226 bits (577), Expect = 8e-58 Identities = 118/141 (83%), Positives = 123/141 (87%) Frame = +1
Query: 28 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 207 MSGK+K + KEENVTL GP RDGEHVFGVAHIFASFNDTFVHVTDLSGKET+ARVTGG Sbjct: 1 MSGKKKVRAEKEENVTL-GPSVRDGEHVFGVAHIFASFNDTFVHVTDLSGKETIARVTGG 59
Query: 208 MKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 387 MKVKADRDE+SPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDEASPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 388 ARSGMRIGRIEDVTPIPTDST 450 ARSGMRIGRIEDVTPIPTDST Sbjct: 120 ARSGMRIGRIEDVTPIPTDST 140
>tr|A9TNC8|A9TNC8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_223910 PE=4 SV=1 Length = 151
Score = 224 bits (571), Expect = 4e-57 Identities = 117/141 (82%), Positives = 122/141 (86%) Frame = +1
Query: 28 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 207 MSGK+K + KEENVTL GP RDGEHVFGVAHIFASFNDTFVHVTDLSGKET+ARVTGG Sbjct: 1 MSGKKKVRAEKEENVTL-GPSVRDGEHVFGVAHIFASFNDTFVHVTDLSGKETIARVTGG 59
Query: 208 MKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 387 MKVKADRDE+SPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDEASPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 388 ARSGMRIGRIEDVTPIPTDST 450 ARS MRIGRIEDVTPIPTDST Sbjct: 120 ARSNMRIGRIEDVTPIPTDST 140
>tr|B4FKA4|B4FKA4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 151
Score = 224 bits (570), Expect = 5e-57 Identities = 113/141 (80%), Positives = 124/141 (87%) Frame = +1
Query: 28 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 207 MSG++KT+E KEENVTL GP R+GEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGG Sbjct: 1 MSGRKKTREPKEENVTL-GPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 59
Query: 208 MKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 387 MKVKADRDESSPYAAMLA+QDVAQ+CKELGITALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 388 ARSGMRIGRIEDVTPIPTDST 450 ARSGM+IGRIEDVTP+PTDST Sbjct: 120 ARSGMKIGRIEDVTPVPTDST 140
>tr|A7PPA9|A7PPA9_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021579001 PE=3 SV=1 Length = 173
Score = 223 bits (567), Expect = 1e-56 Identities = 114/143 (79%), Positives = 122/143 (85%) Frame = +1
Query: 22 VTMSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVT 201 +T + +RK +E KEENVTL GP RDGEH FGVAHIFASFNDTF+HVTDLSG+ETL R+T Sbjct: 21 ITFNSRRKVREPKEENVTL-GPTVRDGEHAFGVAHIFASFNDTFIHVTDLSGRETLVRIT 79
Query: 202 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 381 GGMKVKADRDESSPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALR Sbjct: 80 GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALR 139
Query: 382 ALARSGMRIGRIEDVTPIPTDST 450 ALARSGMRIGRIEDVTPIPTDST Sbjct: 140 ALARSGMRIGRIEDVTPIPTDST 162
>tr|B8LN86|B8LN86_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 151
Score = 221 bits (564), Expect = 2e-56 Identities = 115/141 (81%), Positives = 123/141 (87%) Frame = +1
Query: 28 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 207 MSGK+K +E KE+NVTL GP R+GE VFGVAHIFASFNDTFVHVTDLSGKET+ARVTGG Sbjct: 1 MSGKKKVREPKEDNVTL-GPTVREGEQVFGVAHIFASFNDTFVHVTDLSGKETIARVTGG 59
Query: 208 MKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 387 MKVKADRDESSPYAAMLAAQDVAQ+CKELG+TALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDESSPYAAMLAAQDVAQRCKELGLTALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 388 ARSGMRIGRIEDVTPIPTDST 450 ARSGM+IGRIEDVTPIPTDST Sbjct: 120 ARSGMKIGRIEDVTPIPTDST 140
>tr|Q7XSA6|Q7XSA6_ORYSJ Os02g0534800 protein OS=Oryza sativa subsp. japonica GN=OJ000126_13.9 PE=2 SV=2 Length = 151
Score = 221 bits (562), Expect = 4e-56 Identities = 112/141 (79%), Positives = 124/141 (87%) Frame = +1
Query: 28 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 207 MSG++KT+E KEENVTL GP R+GE+VFGVAHIFASFNDTF+HVTDLSG+ETL R+TGG Sbjct: 1 MSGRKKTREPKEENVTL-GPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 59
Query: 208 MKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 387 MKVKADRDESSPYAAMLA+QDVAQ+CKELGITALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 388 ARSGMRIGRIEDVTPIPTDST 450 ARSGM+IGRIEDVTP+PTDST Sbjct: 120 ARSGMKIGRIEDVTPVPTDST 140
>tr|Q01IS6|Q01IS6_ORYSA OSIGBa0134P10.10 protein (OSIGBa0137L20.1 protein) OS=Oryza sativa GN=OSIGBa0134P10.10 PE=3 SV=1 Length = 151
Score = 221 bits (562), Expect = 4e-56 Identities = 112/141 (79%), Positives = 124/141 (87%) Frame = +1
Query: 28 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 207 MSG++KT+E KEENVTL GP R+GE+VFGVAHIFASFNDTF+HVTDLSG+ETL R+TGG Sbjct: 1 MSGRKKTREPKEENVTL-GPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 59
Query: 208 MKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 387 MKVKADRDESSPYAAMLA+QDVAQ+CKELGITALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 388 ARSGMRIGRIEDVTPIPTDST 450 ARSGM+IGRIEDVTP+PTDST Sbjct: 120 ARSGMKIGRIEDVTPVPTDST 140
>tr|A9PDW2|A9PDW2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 151
Score = 221 bits (562), Expect = 4e-56 Identities = 113/141 (80%), Positives = 122/141 (86%) Frame = +1
Query: 28 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 207 MS +RKT+E KEENVTL GP R+GEH FGVAHIFASFNDTF+HVTDLSG+ETL R+TGG Sbjct: 1 MSSRRKTREPKEENVTL-GPTVREGEHAFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 59
Query: 208 MKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 387 MKVKADRDESSPYAAMLAAQDV+Q+CKELGITALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 388 ARSGMRIGRIEDVTPIPTDST 450 +RSGMRIGRIEDVTPIPTDST Sbjct: 120 SRSGMRIGRIEDVTPIPTDST 140
>tr|A7QQP3|A7QQP3_VITVI Chromosome undetermined scaffold_143, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003445001 PE=3 SV=1 Length = 156
Score = 221 bits (562), Expect = 4e-56 Identities = 114/138 (82%), Positives = 120/138 (86%) Frame = +1
Query: 37 KRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKV 216 +RK +E KEENVTL GP RDGEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGMKV Sbjct: 9 RRKVREPKEENVTL-GPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 67
Query: 217 KADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARS 396 KADRDESSPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALRALARS Sbjct: 68 KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 127
Query: 397 GMRIGRIEDVTPIPTDST 450 GMRIGRIEDVTPIPTDST Sbjct: 128 GMRIGRIEDVTPIPTDST 145
>tr|A2XT84|A2XT84_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07537 PE=3 SV=1 Length = 151
Score = 221 bits (562), Expect = 4e-56 Identities = 112/141 (79%), Positives = 124/141 (87%) Frame = +1
Query: 28 MSGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGG 207 MSG++KT+E KEENVTL GP R+GE+VFGVAHIFASFNDTF+HVTDLSG+ETL R+TGG Sbjct: 1 MSGRKKTREPKEENVTL-GPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 59
Query: 208 MKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRAL 387 MKVKADRDESSPYAAMLA+QDVAQ+CKELGITALHIKLRA AQSALRAL Sbjct: 60 MKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 119
Query: 388 ARSGMRIGRIEDVTPIPTDST 450 ARSGM+IGRIEDVTP+PTDST Sbjct: 120 ARSGMKIGRIEDVTPVPTDST 140
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