DK948726 |
Clone id |
TST38A01NGRL0004_B08 |
Library |
TST38 |
Length |
676 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_B08. 5' end sequence. |
Accession |
DK948726 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL30Contig1 |
Sequence |
GAAAGAGAAAGCTTGGTTGCAGAGACCGTCGGGACGCCATGGCTGCAGCTACCGCATCCT CCCTCACGGCCGCCTGTGTCTCCTCCCTCTCTGCCCACTCCTCCACCTCCCCTGCCCCAG ATCACATCAATTGCTCCTCTCCTTTCGCCAAATTCTCGGGTCTCAAGCTAGCCTCCTCCC CGCTTCCTTCCCACCACAGCCGAGAGAAGAAGAAGAGAAGCAGTGGCAGCAGGAAGGCGC ATCATGTCACTGCAACGGCAGCCGTGGAGGCTCCCCCCAAGACCGATGTCTCGTTGGTGG AGAAGAGCATCAATACTATCCGATTCTTGGCCGTTGATGCAGTTGAGAAGGCTAACTCTG GACACCCAGGTCTTCCCATGGGGTGTGCTCCGATGGGCCACATTCTGTATGACGAGATCA TGAGATACAACCCAAAAAATCCCTATTGGTTCAATCGCGACAGGTTCGTCCTTTCTGCGG GCCATGGTTGCATGTTGCAGTATGCACTTCTTCATCTTGCCGGCTACGACAGCGTCCAGG AGGAAGATCTGAAGCAATTCAGGCAATGGGAGAGCCGAACTCCTGGGCATCCTGAAAACT TTGAGACGCCTGGTGTGGAGGTTACTACAGGGCCCCTTGGCCAAGGTATTTGCAATGCCG TTGGATTAGCTCTGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7SIC9 |
Definition |
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays |
Align length |
127 |
Score (bit) |
260.0 |
E-value |
4.0e-69 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948726|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_B08, 5' (676 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 260 4e-69 sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 259 7e-69 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 257 3e-68 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 243 7e-64 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 224 2e-58 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 216 9e-56 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 175 2e-43 sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT... 172 1e-42 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 171 2e-42 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 168 3e-41 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 168 3e-41 sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=... 168 3e-41 sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae... 168 3e-41 sp|P34736|TKT_PICST Transketolase OS=Pichia stipitis GN=TKT PE=3... 167 4e-41 sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TK... 166 1e-40 sp|P22976|TKT_STRPN Probable transketolase OS=Streptococcus pneu... 165 2e-40 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 165 2e-40 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 165 2e-40 sp|O83571|TKT_TREPA Transketolase OS=Treponema pallidum GN=tkt P... 164 3e-40 sp|Q8CPC7|TKT_STAES Transketolase OS=Staphylococcus epidermidis ... 162 1e-39 sp|Q5HPJ9|TKT_STAEQ Transketolase OS=Staphylococcus epidermidis ... 162 1e-39 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 161 3e-39 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 161 3e-39 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 161 3e-39 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 161 3e-39 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 161 3e-39 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 161 3e-39 sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=t... 161 3e-39 sp|Q8KA26|TKT_BUCAP Transketolase OS=Buchnera aphidicola subsp. ... 160 4e-39 sp|P57195|TKT_BUCAI Transketolase OS=Buchnera aphidicola subsp. ... 160 7e-39
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 260 bits (665), Expect = 4e-69 Identities = 119/127 (93%), Positives = 125/127 (98%) Frame = +3
Query: 294 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 473 L+EKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGH+LYDE+MRYNPKNPYWFNRDRFVL Sbjct: 15 LLEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVL 74
Query: 474 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 653 SAGHGCMLQYALLHLAGYDSV+EEDLKQFRQW SRTPGHPENFETPGVEVTTGPLGQGI Sbjct: 75 SAGHGCMLQYALLHLAGYDSVKEEDLKQFRQWGSRTPGHPENFETPGVEVTTGPLGQGIA 134
Query: 654 NAVGLAL 674 NAVGLAL Sbjct: 135 NAVGLAL 141
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 259 bits (663), Expect = 7e-69 Identities = 118/131 (90%), Positives = 126/131 (96%) Frame = +3
Query: 282 TDVSLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRD 461 TD ++VEKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDE+M+YNPKNPYWFNRD Sbjct: 76 TDAAIVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRD 135
Query: 462 RFVLSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLG 641 RFVLSAGHGCMLQYALLHLAGYDSVQE+DLK FRQW SR PGHPENFETPGVEVTTGPLG Sbjct: 136 RFVLSAGHGCMLQYALLHLAGYDSVQEDDLKSFRQWGSRIPGHPENFETPGVEVTTGPLG 195
Query: 642 QGICNAVGLAL 674 QGI NAVGLA+ Sbjct: 196 QGIANAVGLAV 206
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 257 bits (657), Expect = 3e-68 Identities = 122/132 (92%), Positives = 125/132 (94%), Gaps = 1/132 (0%) Frame = +3
Query: 282 TDVS-LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 458 TD+ LVEKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR Sbjct: 75 TDIDQLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 134
Query: 459 DRFVLSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPL 638 DRFVLSAGHGCMLQYALLHLAGYDSV EEDLK FRQW SR PGHPENFETPGVEVTTGPL Sbjct: 135 DRFVLSAGHGCMLQYALLHLAGYDSVLEEDLKTFRQWGSRIPGHPENFETPGVEVTTGPL 194
Query: 639 GQGICNAVGLAL 674 GQGI NAVGLAL Sbjct: 195 GQGIANAVGLAL 206
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 243 bits (620), Expect = 7e-64 Identities = 110/127 (86%), Positives = 119/127 (93%) Frame = +3
Query: 294 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 473 LV KS+NTIRFLA+DAVEKA SGHPG+PMGCAPMGH+LYDE MR+NPKNPYWFNRDRFVL Sbjct: 13 LVSKSVNTIRFLAIDAVEKAKSGHPGMPMGCAPMGHVLYDEFMRFNPKNPYWFNRDRFVL 72
Query: 474 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 653 SAGHGCMLQYALLHL+GYDSV+EEDLK RQW SRTP HPENFETPGVEVTTGPLGQGI Sbjct: 73 SAGHGCMLQYALLHLSGYDSVKEEDLKSLRQWGSRTPAHPENFETPGVEVTTGPLGQGIA 132
Query: 654 NAVGLAL 674 +AVGLA+ Sbjct: 133 SAVGLAV 139
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 224 bits (572), Expect = 2e-58 Identities = 102/127 (80%), Positives = 113/127 (88%) Frame = +3
Query: 294 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 473 LV KS+NTIRFLA+DAVE SGHPG+PMGCAPMGH+L+DE M++NPKNPYWFNRDRFVL Sbjct: 17 LVVKSVNTIRFLAIDAVENVKSGHPGMPMGCAPMGHVLFDEFMKFNPKNPYWFNRDRFVL 76
Query: 474 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 653 SAGHG ML Y LLHLAGYDSV+ EDLK RQW S+TP HPENFETPGVEVTTGPLGQG+ Sbjct: 77 SAGHGAMLLYGLLHLAGYDSVKVEDLKGLRQWGSKTPAHPENFETPGVEVTTGPLGQGVG 136
Query: 654 NAVGLAL 674 +AVGLAL Sbjct: 137 SAVGLAL 143
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 216 bits (550), Expect = 9e-56 Identities = 102/128 (79%), Positives = 110/128 (85%) Frame = +3
Query: 291 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 470 SL E SIN IRFLAVDA+EKA SGHPGLPMG APM +L++ MRYNPKNP WFNRDRFV Sbjct: 7 SLEELSINAIRFLAVDAIEKAKSGHPGLPMGAAPMAFVLWNRFMRYNPKNPKWFNRDRFV 66
Query: 471 LSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGI 650 LSAGHG MLQYALL+L GYDSV ED+KQFRQWES+TPGHPENF T GVEVTTGPLGQGI Sbjct: 67 LSAGHGSMLQYALLYLTGYDSVSIEDIKQFRQWESKTPGHPENFMTAGVEVTTGPLGQGI 126
Query: 651 CNAVGLAL 674 N VGLA+ Sbjct: 127 ANGVGLAI 134
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 175 bits (444), Expect = 2e-43 Identities = 81/123 (65%), Positives = 98/123 (79%) Frame = +3
Query: 306 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGH 485 ++NTIR L++D+VEKANSGHPG+PMG APM L+ + M +NP NP W NRDRFVLSAGH Sbjct: 9 AVNTIRTLSIDSVEKANSGHPGMPMGAAPMAFCLWTKFMNHNPANPDWVNRDRFVLSAGH 68
Query: 486 GCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVG 665 G ML Y+LLHL GYD + E+L+ FRQW S+TPGHPE TPGVE TTGPLGQG+ AVG Sbjct: 69 GSMLLYSLLHLTGYD-LSLEELQNFRQWGSKTPGHPEYGHTPGVEATTGPLGQGVAMAVG 127
Query: 666 LAL 674 +A+ Sbjct: 128 MAM 130
>sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT PE=3 SV=2 Length = 668
Score = 172 bits (436), Expect = 1e-42 Identities = 77/125 (61%), Positives = 100/125 (80%) Frame = +3
Query: 300 EKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSA 479 ++ N IRFLA+DAVE ANSGHPGLPMG A + +L+ ++++Y+P P+W +RDRFVLSA Sbjct: 13 DRLANAIRFLAIDAVEAANSGHPGLPMGAADIATVLFTKVLKYDPSRPFWPDRDRFVLSA 72
Query: 480 GHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNA 659 GHG ML Y++LHLAGY+ V +++K+FRQ S TPGHPENF T G+E TTGPLGQGI A Sbjct: 73 GHGSMLLYSVLHLAGYEKVTIDEIKRFRQLGSLTPGHPENFVTEGIETTTGPLGQGIATA 132
Query: 660 VGLAL 674 VG+A+ Sbjct: 133 VGMAM 137
>sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=2 Length = 667
Score = 171 bits (434), Expect = 2e-42 Identities = 80/128 (62%), Positives = 101/128 (78%) Frame = +3
Query: 291 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 470 ++ +KS+ TIR L++DA+EKANSGHPG+PMG APM + L+ + M +P NP WFNRDRFV Sbjct: 3 TIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFV 62
Query: 471 LSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGI 650 LSAGHG L Y++LHL+G+D + EDLK FRQW S+TPGHPE T GV+ TTGPLGQGI Sbjct: 63 LSAGHGSALLYSMLHLSGFD-LSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGI 121
Query: 651 CNAVGLAL 674 AVG+A+ Sbjct: 122 AMAVGMAI 129
>sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes serotype M18 GN=tkt PE=3 SV=1 Length = 729
Score = 168 bits (425), Expect = 3e-41 Identities = 79/124 (63%), Positives = 97/124 (78%), Gaps = 1/124 (0%) Frame = +3
Query: 306 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPY-WFNRDRFVLSAG 482 ++NT+R L++DA++ ANSGHPGLPMG APM ++L++ M NPK W NRDRF+LSAG Sbjct: 78 AVNTVRTLSMDAIQAANSGHPGLPMGAAPMAYVLWNHFMNINPKTSRNWSNRDRFILSAG 137
Query: 483 HGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAV 662 HG + Y+LLHLAGYD + EDLK FRQW S+TPGHPE T GVE TTGPLGQGI NAV Sbjct: 138 HGSAMLYSLLHLAGYD-LSVEDLKNFRQWGSKTPGHPEVNHTDGVEATTGPLGQGIANAV 196
Query: 663 GLAL 674 G+A+ Sbjct: 197 GMAM 200
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SUL8 |
Definition |
tr|A9SUL8|A9SUL8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
131 |
Score (bit) |
265.0 |
E-value |
2.0e-69 |
Report |
|