DK948754 |
Clone id |
TST38A01NGRL0004_C12 |
Library |
TST38 |
Length |
687 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_C12. 5' end sequence. |
Accession |
DK948754 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL108Contig1 |
Sequence |
GTCAGTTTCTACCGCAACTATGGAAAGACGTTCAAGAAGCCCCGCCGTCCTTATGAGAAG GAGCGGCTCGATGCAGAACTGAAGCTCGTAGGGGAATATGGACTCCGTAACAAGAGAGAA CTGTGGAGAGTTCAATATGCATTGAGCCGTATCCGCAACAATGCCCGAATGTTGCTTACA CTCGATGAGAAGAACCCACGCAGAATCTTCGAGGGAGAGGCTCTTCTACGTCGCATGTTC AGATATGGTCTTCTAGATGAAAGCCAAAACAAGCTCGATTATGTTTTGGCATTGACAGTT GAGAACTTCTTGGAACGCCGTCTGCAGACTCTTGTCTTCAAGTCGGGCATGGCCAAATCG ATTCATCATGCCCGAGTGCTTATCAAGCAGAGGCATATTAGGGTTGGCAAGCAAGTTGTC AATGTTGCCTCTTTTCTGGTGAGAGTGGATTCACAGAAGCATATTGATTTTGCACTGTCG AGTCCCTTCGGTGGCGGTAGACCTGGCCGTGTGAAGAGAAGGAACATGAAGGCTGCCTCT AAGAAGGCTGCTGGTGGTGAAGAGGAGGAGGATGAAGATTAAAGTGACAGAGCTTCTGTT GTTTGAAGTCAAGAAACAAAGAGAGAGACTAGACATTTTTGACTGTTAACTTTTTGAATG AAGGCCTGCTAGCATCAGGCGCTTTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FLF0 |
Definition |
sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2 OS=Arabidopsis thaliana |
Align length |
175 |
Score (bit) |
319.0 |
E-value |
1.0e-86 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q60CZ2 |
Definition |
tr|Q60CZ2|Q60CZ2_SOLDE 40S ribosomal protein S9 , putative OS=Solanum demissum |
Align length |
175 |
Score (bit) |
328.0 |
E-value |
2.0e-88 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948754|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_C12, 5' (687 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q60CZ2|Q60CZ2_SOLDE 40S ribosomal protein S9 , putative OS=So... 328 2e-88 tr|A7PMS9|A7PMS9_VITVI Chromosome chr14 scaffold_21, whole genom... 328 3e-88 tr|A9NMP0|A9NMP0_PICSI Putative uncharacterized protein OS=Picea... 327 3e-88 tr|Q3HRY4|Q3HRY4_SOLTU Putative uncharacterized protein OS=Solan... 327 4e-88 tr|B7FMD4|B7FMD4_MEDTR Putative uncharacterized protein OS=Medic... 326 1e-87 tr|A9PJU4|A9PJU4_POPJC Putative uncharacterized protein OS=Popul... 325 2e-87 tr|A9PAL5|A9PAL5_POPTR Putative uncharacterized protein OS=Popul... 325 2e-87 tr|A7QEG7|A7QEG7_VITVI Chromosome chr1 scaffold_84, whole genome... 325 2e-87 tr|Q6H8J2|Q6H8J2_CATRO 40S ribosomal protein S9 OS=Catharanthus ... 324 4e-87 tr|B8LND2|B8LND2_PICSI Putative uncharacterized protein OS=Picea... 324 4e-87 tr|A9SLM0|A9SLM0_PHYPA Predicted protein OS=Physcomitrella paten... 324 4e-87 tr|A9RK26|A9RK26_PHYPA Predicted protein OS=Physcomitrella paten... 324 4e-87 tr|A9PJ59|A9PJ59_POPJC Putative uncharacterized protein OS=Popul... 323 5e-87 tr|A9P9U8|A9P9U8_POPTR Putative uncharacterized protein OS=Popul... 323 5e-87 tr|A9TG44|A9TG44_PHYPA Predicted protein OS=Physcomitrella paten... 323 6e-87 tr|A5HSG2|A5HSG2_ARTAN Putative 40S ribosomal protein S9 OS=Arte... 323 6e-87 tr|B3TM27|B3TM27_ELAGV Ribosomal protein OS=Elaeis guineensis va... 322 1e-86 tr|A9RKT7|A9RKT7_PHYPA Predicted protein OS=Physcomitrella paten... 322 1e-86 tr|A9PA82|A9PA82_POPTR Putative uncharacterized protein OS=Popul... 320 7e-86 tr|B3TM34|B3TM34_ELAGV 40S ribosomal protein S9 OS=Elaeis guinee... 317 3e-85 tr|A9S7K2|A9S7K2_PHYPA Predicted protein OS=Physcomitrella paten... 316 8e-85 tr|Q2R1J8|Q2R1J8_ORYSJ 40S ribosomal protein S9, putative, expre... 314 3e-84 tr|A2ZFU3|A2ZFU3_ORYSI Putative uncharacterized protein OS=Oryza... 314 3e-84 tr|Q676Y9|Q676Y9_HYAOR 40S ribosomal protein S9 OS=Hyacinthus or... 314 4e-84 tr|B6SZS2|B6SZS2_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 311 2e-83 tr|B6T7B2|B6T7B2_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 309 9e-83 tr|A8JGF8|A8JGF8_CHLRE Ribosomal protein S9, component of cytoso... 308 2e-82 tr|B6T8L0|B6T8L0_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 307 4e-82 tr|B6TH64|B6TH64_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 306 1e-81 tr|Q2R1J7|Q2R1J7_ORYSJ 40S ribosomal protein S9, putative, expre... 304 3e-81
>tr|Q60CZ2|Q60CZ2_SOLDE 40S ribosomal protein S9 , putative OS=Solanum demissum GN=SDM1_52t00012 PE=3 SV=1 Length = 197
Score = 328 bits (841), Expect = 2e-88 Identities = 164/175 (93%), Positives = 172/175 (98%) Frame = +1
Query: 1 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLT 180 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARMLLT Sbjct: 4 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARMLLT 63
Query: 181 LDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 360 LDEK+PRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFK+GMAKS Sbjct: 64 LDEKDPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKTGMAKS 123
Query: 361 IHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRN 525 IHHARVLI+QRHIRVG+QVVNVASF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N Sbjct: 124 IHHARVLIRQRHIRVGRQVVNVASFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKN 178
>tr|A7PMS9|A7PMS9_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence (Chromosome chr17 scaffold_101, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00000124001 PE=3 SV=1 Length = 197
Score = 328 bits (840), Expect = 3e-88 Identities = 163/175 (93%), Positives = 170/175 (97%) Frame = +1
Query: 1 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLT 180 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQY LSRIRNNARMLLT Sbjct: 4 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNNARMLLT 63
Query: 181 LDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 360 LDEKNPRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS Sbjct: 64 LDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 123
Query: 361 IHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRN 525 IHHARVLI+QRHIRVG+QVVN+ SFLVR+DSQKHIDF+L+SP GGGRPGRVKR+N Sbjct: 124 IHHARVLIRQRHIRVGRQVVNIPSFLVRMDSQKHIDFSLTSPLGGGRPGRVKRKN 178
>tr|A9NMP0|A9NMP0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 197
Score = 327 bits (839), Expect = 3e-88 Identities = 162/176 (92%), Positives = 171/176 (97%) Frame = +1
Query: 1 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLT 180 V+FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQY LSRIRN ARMLLT Sbjct: 4 VNFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYTLSRIRNAARMLLT 63
Query: 181 LDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 360 LDEKNPRRIFEGEALLRRM RYGLLDESQ+KLDYVLALTVENFLERRLQTLVFKSGMAKS Sbjct: 64 LDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGMAKS 123
Query: 361 IHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 528 IHHARVLI+QRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SP GGGRPGRVKR+NM Sbjct: 124 IHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNM 179
>tr|Q3HRY4|Q3HRY4_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 197
Score = 327 bits (838), Expect = 4e-88 Identities = 163/175 (93%), Positives = 172/175 (98%) Frame = +1
Query: 1 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLT 180 V+FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARMLLT Sbjct: 4 VNFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARMLLT 63
Query: 181 LDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 360 LDEK+PRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFK+GMAKS Sbjct: 64 LDEKDPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKTGMAKS 123
Query: 361 IHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRN 525 IHHARVLI+QRHIRVG+QVVNVASF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N Sbjct: 124 IHHARVLIRQRHIRVGRQVVNVASFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKN 178
>tr|B7FMD4|B7FMD4_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 197
Score = 326 bits (835), Expect = 1e-87 Identities = 160/176 (90%), Positives = 172/176 (97%) Frame = +1
Query: 1 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLT 180 V+FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRNNAR LLT Sbjct: 4 VAFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARTLLT 63
Query: 181 LDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 360 LDEKNPRRIFEGEALLRRMF++GLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGMAKS Sbjct: 64 LDEKNPRRIFEGEALLRRMFKHGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 123
Query: 361 IHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 528 IHHARVLI+QRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SPFGGG PGRVKR+N+ Sbjct: 124 IHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGLPGRVKRKNL 179
>tr|A9PJU4|A9PJU4_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 197
Score = 325 bits (832), Expect = 2e-87 Identities = 162/175 (92%), Positives = 170/175 (97%) Frame = +1
Query: 1 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLT 180 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARMLLT Sbjct: 4 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRAKRELWRVQYALSRIRNAARMLLT 63
Query: 181 LDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 360 LDEKN RRIFEGEALLRRM RYGLL+ESQNKLDYVLALTVENFLERRLQTLVFK+GMAKS Sbjct: 64 LDEKNQRRIFEGEALLRRMNRYGLLEESQNKLDYVLALTVENFLERRLQTLVFKAGMAKS 123
Query: 361 IHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRN 525 IHHARVLIKQRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N Sbjct: 124 IHHARVLIKQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKN 178
>tr|A9PAL5|A9PAL5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 197
Score = 325 bits (832), Expect = 2e-87 Identities = 162/175 (92%), Positives = 170/175 (97%) Frame = +1
Query: 1 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLT 180 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARMLLT Sbjct: 4 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRAKRELWRVQYALSRIRNAARMLLT 63
Query: 181 LDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 360 LDEKN RRIFEGEALLRRM RYGLL+ESQNKLDYVLALTVENFLERRLQTLVFK+GMAKS Sbjct: 64 LDEKNQRRIFEGEALLRRMNRYGLLEESQNKLDYVLALTVENFLERRLQTLVFKAGMAKS 123
Query: 361 IHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRN 525 IHHARVLIKQRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N Sbjct: 124 IHHARVLIKQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKN 178
>tr|A7QEG7|A7QEG7_VITVI Chromosome chr1 scaffold_84, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037003001 PE=3 SV=1 Length = 197
Score = 325 bits (832), Expect = 2e-87 Identities = 161/176 (91%), Positives = 170/176 (96%) Frame = +1
Query: 1 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLT 180 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQY LSRIRNNARMLLT Sbjct: 4 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNNARMLLT 63
Query: 181 LDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 360 LDEKNPRRIFEGEALLRRM +YGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS Sbjct: 64 LDEKNPRRIFEGEALLRRMNKYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 123
Query: 361 IHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 528 IHHARVLI+QRHIRVG+QVVN+ SF+VRV+SQKHIDFA +SP GGGRPGRVKR+N+ Sbjct: 124 IHHARVLIRQRHIRVGRQVVNIPSFMVRVESQKHIDFANTSPLGGGRPGRVKRKNL 179
>tr|Q6H8J2|Q6H8J2_CATRO 40S ribosomal protein S9 OS=Catharanthus roseus GN=rps9 PE=2 SV=1 Length = 197
Score = 324 bits (830), Expect = 4e-87 Identities = 162/176 (92%), Positives = 169/176 (96%) Frame = +1
Query: 1 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLT 180 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQY LSRIRN AR LLT Sbjct: 4 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNAARNLLT 63
Query: 181 LDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 360 LDEK+PRRIFEGEALLRRM RYGLLDE QNKLDYVLALTVENFLERRLQTLVFKSGMAKS Sbjct: 64 LDEKDPRRIFEGEALLRRMNRYGLLDEGQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 123
Query: 361 IHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 528 IHHARVLI+QRHIRVGKQVVNV SF+VRVDSQKHIDF+++SPFGGGRPGRVKR+NM Sbjct: 124 IHHARVLIRQRHIRVGKQVVNVPSFMVRVDSQKHIDFSITSPFGGGRPGRVKRKNM 179
>tr|B8LND2|B8LND2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 197
Score = 324 bits (830), Expect = 4e-87 Identities = 160/176 (90%), Positives = 170/176 (96%) Frame = +1
Query: 1 VSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLT 180 V FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQY LSRIRN ARMLLT Sbjct: 4 VVFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYTLSRIRNAARMLLT 63
Query: 181 LDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 360 LDEKNPRRIFEGEALLRRM RYGLLDE+Q+KLDYVLALTVENFLERRLQTLVFKSGMAKS Sbjct: 64 LDEKNPRRIFEGEALLRRMNRYGLLDETQSKLDYVLALTVENFLERRLQTLVFKSGMAKS 123
Query: 361 IHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 528 IHHARVLI+QRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SP GGGRPGRVKR+N+ Sbjct: 124 IHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNL 179
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