DK948770 |
Clone id |
TST38A01NGRL0004_D04 |
Library |
TST38 |
Length |
676 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_D04. 5' end sequence. |
Accession |
DK948770 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL30Contig1 |
Sequence |
CGTCTCCCTCGAGATCATCATCTTTTCGCAGGGGAAAGAGAAAGCTTGGTTGCAGAGACC GTCGGGACGCCATGGCTGCAGCTACCGCATCCTCCCTCACGGCCGCCTGTGTCTCCTCCC TCTCTGCCCACTCCTCCACCTCCCCTGCCCCAGATCACATCAATTGCTCCTCTCCTTTCG CCAAATTCTCGGGTCTCAAGCTAGCCTCCTCCCCGCTTCCTTCCCACCACACCCAAGAGA AGAAGAAGAGAAGCAGTGGCAGCAGGAAGGCGCATCATGTCACTGCAACGGCAGCCGTGG AGGCTCCCCCCAAGACCGATGTCTCGTTGGTGGAGAAGAGCATCAATACTATCCGATTCT TGGCCGTTGATGCAGTTGAGAAGGCTAACTCTGGACACCCAGGTCTTCCCATGGGGTGTG CTCCGATGGGCCACATTCTGTATGACGAGATCATGAGATACAACCCAAAAAATCCCTATT GGTTCAATCGCGACAGGTTCGTCCTTTCTGCGGGCCATGGTTGCATGTTGCAGTATGCAC TTCTTCATCTTGCCGGCTACGACAGCGTCCAGGAGGAAGATCTGAAGCAATTCAGGCAAT GGGAGAGCCGAACTCCTGGGCATCCTGAAAACTTTGAGACGCCTGGTGTGGAGGTTACTA CAGGGCCCCTTGGCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q43848 |
Definition |
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum |
Align length |
169 |
Score (bit) |
246.0 |
E-value |
8.0e-65 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948770|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_D04, 5' (676 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 246 8e-65 sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 242 1e-63 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 239 1e-62 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 228 2e-59 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 210 6e-54 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 200 5e-51 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 162 2e-39 sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT... 158 3e-38 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 158 3e-38 sp|P22976|TKT_STRPN Probable transketolase OS=Streptococcus pneu... 154 4e-37 sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=... 154 4e-37 sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae... 152 2e-36 sp|O83571|TKT_TREPA Transketolase OS=Treponema pallidum GN=tkt P... 151 3e-36 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 151 3e-36 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 151 3e-36 sp|Q8CPC7|TKT_STAES Transketolase OS=Staphylococcus epidermidis ... 151 3e-36 sp|Q5HPJ9|TKT_STAEQ Transketolase OS=Staphylococcus epidermidis ... 151 3e-36 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 149 1e-35 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 149 1e-35 sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TK... 149 1e-35 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 149 1e-35 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 149 1e-35 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 149 1e-35 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 149 1e-35 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 149 1e-35 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 149 1e-35 sp|P34736|TKT_PICST Transketolase OS=Pichia stipitis GN=TKT PE=3... 148 2e-35 sp|Q89AY2|TKT_BUCBP Transketolase OS=Buchnera aphidicola subsp. ... 146 1e-34 sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=t... 145 2e-34 sp|Q8KA26|TKT_BUCAP Transketolase OS=Buchnera aphidicola subsp. ... 145 2e-34
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 246 bits (628), Expect = 8e-65 Identities = 120/169 (71%), Positives = 134/169 (79%) Frame = +3
Query: 168 SSPFAKFSGLKLASSPLPSHHTQEKKKRSSGSRXXXXXXXXXXXXXXXXTDVSLVEKSIN 347 S F+ FSGLK S+P S H + ++ ++ TD ++VEKS+N Sbjct: 30 SLSFSTFSGLK--STPFTSSHRRILPS-TTVTKQQFSVRASAAVETLEKTDAAIVEKSVN 86
Query: 348 TIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGCM 527 TIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDE+M+YNPKNPYWFNRDRFVLSAGHGCM Sbjct: 87 TIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCM 146
Query: 528 LQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLG 674 LQYALLHLAGYDSVQE+DLK FRQW SR PGHPENFETPGVEVTTGPLG Sbjct: 147 LQYALLHLAGYDSVQEDDLKSFRQWGSRIPGHPENFETPGVEVTTGPLG 195
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 242 bits (618), Expect = 1e-63 Identities = 109/116 (93%), Positives = 115/116 (99%) Frame = +3
Query: 327 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 506 L+EKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGH+LYDE+MRYNPKNPYWFNRDRFVL Sbjct: 15 LLEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVL 74
Query: 507 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLG 674 SAGHGCMLQYALLHLAGYDSV+EEDLKQFRQW SRTPGHPENFETPGVEVTTGPLG Sbjct: 75 SAGHGCMLQYALLHLAGYDSVKEEDLKQFRQWGSRTPGHPENFETPGVEVTTGPLG 130
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 239 bits (610), Expect = 1e-62 Identities = 112/121 (92%), Positives = 115/121 (95%), Gaps = 1/121 (0%) Frame = +3
Query: 315 TDVS-LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 491 TD+ LVEKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR Sbjct: 75 TDIDQLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 134
Query: 492 DRFVLSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPL 671 DRFVLSAGHGCMLQYALLHLAGYDSV EEDLK FRQW SR PGHPENFETPGVEVTTGPL Sbjct: 135 DRFVLSAGHGCMLQYALLHLAGYDSVLEEDLKTFRQWGSRIPGHPENFETPGVEVTTGPL 194
Query: 672 G 674 G Sbjct: 195 G 195
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 228 bits (581), Expect = 2e-59 Identities = 102/116 (87%), Positives = 109/116 (93%) Frame = +3
Query: 327 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 506 LV KS+NTIRFLA+DAVEKA SGHPG+PMGCAPMGH+LYDE MR+NPKNPYWFNRDRFVL Sbjct: 13 LVSKSVNTIRFLAIDAVEKAKSGHPGMPMGCAPMGHVLYDEFMRFNPKNPYWFNRDRFVL 72
Query: 507 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLG 674 SAGHGCMLQYALLHL+GYDSV+EEDLK RQW SRTP HPENFETPGVEVTTGPLG Sbjct: 73 SAGHGCMLQYALLHLSGYDSVKEEDLKSLRQWGSRTPAHPENFETPGVEVTTGPLG 128
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 210 bits (534), Expect = 6e-54 Identities = 94/116 (81%), Positives = 103/116 (88%) Frame = +3
Query: 327 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 506 LV KS+NTIRFLA+DAVE SGHPG+PMGCAPMGH+L+DE M++NPKNPYWFNRDRFVL Sbjct: 17 LVVKSVNTIRFLAIDAVENVKSGHPGMPMGCAPMGHVLFDEFMKFNPKNPYWFNRDRFVL 76
Query: 507 SAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLG 674 SAGHG ML Y LLHLAGYDSV+ EDLK RQW S+TP HPENFETPGVEVTTGPLG Sbjct: 77 SAGHGAMLLYGLLHLAGYDSVKVEDLKGLRQWGSKTPAHPENFETPGVEVTTGPLG 132
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 200 bits (509), Expect = 5e-51 Identities = 94/117 (80%), Positives = 101/117 (86%) Frame = +3
Query: 324 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 503 SL E SIN IRFLAVDA+EKA SGHPGLPMG APM +L++ MRYNPKNP WFNRDRFV Sbjct: 7 SLEELSINAIRFLAVDAIEKAKSGHPGLPMGAAPMAFVLWNRFMRYNPKNPKWFNRDRFV 66
Query: 504 LSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLG 674 LSAGHG MLQYALL+L GYDSV ED+KQFRQWES+TPGHPENF T GVEVTTGPLG Sbjct: 67 LSAGHGSMLQYALLYLTGYDSVSIEDIKQFRQWESKTPGHPENFMTAGVEVTTGPLG 123
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 162 bits (410), Expect = 2e-39 Identities = 75/112 (66%), Positives = 89/112 (79%) Frame = +3
Query: 339 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGH 518 ++NTIR L++D+VEKANSGHPG+PMG APM L+ + M +NP NP W NRDRFVLSAGH Sbjct: 9 AVNTIRTLSIDSVEKANSGHPGMPMGAAPMAFCLWTKFMNHNPANPDWVNRDRFVLSAGH 68
Query: 519 GCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLG 674 G ML Y+LLHL GYD + E+L+ FRQW S+TPGHPE TPGVE TTGPLG Sbjct: 69 GSMLLYSLLHLTGYD-LSLEELQNFRQWGSKTPGHPEYGHTPGVEATTGPLG 119
>sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT PE=3 SV=2 Length = 668
Score = 158 bits (399), Expect = 3e-38 Identities = 70/114 (61%), Positives = 91/114 (79%) Frame = +3
Query: 333 EKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSA 512 ++ N IRFLA+DAVE ANSGHPGLPMG A + +L+ ++++Y+P P+W +RDRFVLSA Sbjct: 13 DRLANAIRFLAIDAVEAANSGHPGLPMGAADIATVLFTKVLKYDPSRPFWPDRDRFVLSA 72
Query: 513 GHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLG 674 GHG ML Y++LHLAGY+ V +++K+FRQ S TPGHPENF T G+E TTGPLG Sbjct: 73 GHGSMLLYSVLHLAGYEKVTIDEIKRFRQLGSLTPGHPENFVTEGIETTTGPLG 126
>sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=2 Length = 667
Score = 158 bits (399), Expect = 3e-38 Identities = 73/117 (62%), Positives = 92/117 (78%) Frame = +3
Query: 324 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 503 ++ +KS+ TIR L++DA+EKANSGHPG+PMG APM + L+ + M +P NP WFNRDRFV Sbjct: 3 TIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFV 62
Query: 504 LSAGHGCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLG 674 LSAGHG L Y++LHL+G+D + EDLK FRQW S+TPGHPE T GV+ TTGPLG Sbjct: 63 LSAGHGSALLYSMLHLSGFD-LSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLG 118
>sp|P22976|TKT_STRPN Probable transketolase OS=Streptococcus pneumoniae GN=tkt PE=3 SV=2 Length = 658
Score = 154 bits (389), Expect = 4e-37 Identities = 67/112 (59%), Positives = 85/112 (75%) Frame = +3
Query: 339 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGH 518 S+N IRFL +DA+ KANSGHPG+ MG APM + L+ + + NP P W NRDRF+LSAGH Sbjct: 5 SVNAIRFLGIDAINKANSGHPGVVMGAAPMAYSLFTKQLHINPAQPNWINRDRFILSAGH 64
Query: 519 GCMLQYALLHLAGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLG 674 G ML YALLHL+G++ V +++K FRQW S+TPGHPE T G++ TTGPLG Sbjct: 65 GSMLLYALLHLSGFEDVSMDEIKSFRQWGSKTPGHPEFGHTAGIDATTGPLG 116
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P7Z7 |
Definition |
tr|A9P7Z7|A9P7Z7_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
163 |
Score (bit) |
250.0 |
E-value |
5.0e-65 |
Report |
|