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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948819
Clone id TST38A01NGRL0004_F07
Library
Length 670
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_F07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
AAGCTTGTTAGTGCATGCAGGTATGCGCGTGTATGTGAGTGGTTAGTTTTCTCTCTCTTT
CCCTCATGCGCTGAATTGAGTCCTCTCCACGCCCTTGCTGCCCACAGTCGGGTGGCCTTT
GTTTATACGTTCAGCCTCTTCCATGATTTCTCCGTGAAGCCGATTAGATTAGCAGCAGGC
GAGCTACTTTGCGTGCTGGCCAGAGATCTCTTCCGCGTCCAATATCCTTGCAAATCGGCA
ATTGCATTCCGCACAGAAACGGACCTTGACATCACACAGTGAATCGATTCTCCAAAGACT
CCCGACACTCAGAACGCCATGGCCATGGCAATGGTAGCTCCCCTTTACACATGGCTCGTT
GCAGCAGCATGTTCATACGGTGCCACTGCGGGCGATGAGAGGGGTGGGCCTGCTTCCCCT
CTGGGACGGCGCGCCCGACGCAGGCTTCAAAGGATGGGTGGAGCAGGGTCAGCATTGGTT
TGCAGCAATCAGGGCTACAGCAGTATGCTACCAGGAGTTGCATCTTTCTGTGGATCCAGC
CTGCAGGGGCTTGGCTCTTGCCTCTCTTTTGAAGCTTGCCCTGAGTACTACAGCTCCAAA
CAGTCCCCTCTTTTTGGTGATGGCATTTTCGGGCTTGGATTTGGTACACGGCCCATGAGG
GCTGCTCGTC
■■Homology search results ■■ -
sp_hit_id Q8NEC5
Definition sp|Q8NEC5|CTSR1_HUMAN Cation channel sperm-associated protein 1 OS=Homo sapiens
Align length 35
Score (bit) 33.9
E-value 0.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948819|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_F07, 5'
         (670 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8NEC5|CTSR1_HUMAN Cation channel sperm-associated protein 1 ...    34   0.80 
sp|Q8VHD8|HORN_MOUSE Hornerin OS=Mus musculus GN=Hrnr PE=2 SV=1        29   2.4  
sp|Q5ZM39|BCL6_CHICK B-cell lymphoma 6 protein homolog OS=Gallus...    32   4.0  
sp|A8MTL4|KR41X_HUMAN Putative keratin-associated protein 4-X OS...    26   4.0  
sp|P60370|KR105_HUMAN Keratin-associated protein 10-5 OS=Homo sa...    24   4.3  
sp|Q9Y2J0|RP3A_HUMAN Rabphilin-3A OS=Homo sapiens GN=RPH3A PE=1 ...    31   6.8  
sp|P77668|HYFI_ECOLI Hydrogenase-4 component I OS=Escherichia co...    31   6.8  
sp|P34250|YKK5_YEAST Uncharacterized protein YKL105C OS=Saccharo...    31   6.8  
sp|Q59U81|SWR1_CANAL Helicase SWR1 OS=Candida albicans GN=SWR1 P...    30   8.8  

>sp|Q8NEC5|CTSR1_HUMAN Cation channel sperm-associated protein 1
           OS=Homo sapiens GN=CATSPER1 PE=1 SV=2
          Length = 780

 Score = 33.9 bits (76), Expect = 0.80
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = +3

Query: 246 IPHRNGP*HHTVNRFSKDSRHSERHGHGNGSSPLH 350
           +PHR  P HH V+   + SRH E H H  G SP H
Sbjct: 212 VPHRGWPHHHQVHHHGR-SRHHEAHQH--GKSPHH 243


>sp|Q8VHD8|HORN_MOUSE Hornerin OS=Mus musculus GN=Hrnr PE=2 SV=1
          Length = 2496

 Score = 29.3 bits (64), Expect(2) = 2.4
 Identities = 23/68 (33%), Positives = 30/68 (44%)
 Frame = +3

Query: 315  RHGHGNGSSPLHMARCSSMFIRCHCGR*EGWACFPSGTARPTQASKDGWSRVSIGLQQSG 494
            RHG G+G  P+   + S      H G         SG++   Q+S   WS  S   Q SG
Sbjct: 2232 RHGSGSGQFPISGQQGS------HHGHSSSSGTHNSGSS---QSSSTQWSHGSGSEQSSG 2282

Query: 495  LQQYATRS 518
            L QY + S
Sbjct: 2283 LGQYGSPS 2290



 Score = 21.6 bits (44), Expect(2) = 2.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 291  SKDSRHSERHGHGNGSS 341
            S++S  S+R+G G+G S
Sbjct: 2179 SRESSTSQRYGSGSGES 2195



 Score = 27.7 bits (60), Expect(2) = 6.6
 Identities = 22/68 (32%), Positives = 29/68 (42%)
 Frame = +3

Query: 315 RHGHGNGSSPLHMARCSSMFIRCHCGR*EGWACFPSGTARPTQASKDGWSRVSIGLQQSG 494
           RHG G+G  P+   + S      H G         SG++   Q+S   WS  S   Q SG
Sbjct: 668 RHGSGSGQFPISGQQGS------HHGHSSSSGTHNSGSS---QSSSTQWSHGSGSEQSSG 718

Query: 495 LQQYATRS 518
           L  Y + S
Sbjct: 719 LGHYGSTS 726



 Score = 27.7 bits (60), Expect(2) = 6.6
 Identities = 22/68 (32%), Positives = 29/68 (42%)
 Frame = +3

Query: 315  RHGHGNGSSPLHMARCSSMFIRCHCGR*EGWACFPSGTARPTQASKDGWSRVSIGLQQSG 494
            RHG G+G  P+   + S      H G         SG++   Q+S   WS  S   Q SG
Sbjct: 1017 RHGSGSGQFPISGQQGS------HHGHSSSSGTHNSGSS---QSSSTQWSHGSGSEQSSG 1067

Query: 495  LQQYATRS 518
            L  Y + S
Sbjct: 1068 LGHYGSTS 1075



 Score = 27.7 bits (60), Expect(2) = 6.6
 Identities = 22/68 (32%), Positives = 29/68 (42%)
 Frame = +3

Query: 315  RHGHGNGSSPLHMARCSSMFIRCHCGR*EGWACFPSGTARPTQASKDGWSRVSIGLQQSG 494
            RHG G+G  P+   + S      H G         SG++   Q+S   WS  S   Q SG
Sbjct: 1365 RHGSGSGQFPISGQQGS------HHGHSSSSGTHNSGSS---QSSSTQWSHGSGSEQSSG 1415

Query: 495  LQQYATRS 518
            L  Y + S
Sbjct: 1416 LGHYGSTS 1423



 Score = 27.7 bits (60), Expect(2) = 6.6
 Identities = 22/68 (32%), Positives = 29/68 (42%)
 Frame = +3

Query: 315  RHGHGNGSSPLHMARCSSMFIRCHCGR*EGWACFPSGTARPTQASKDGWSRVSIGLQQSG 494
            RHG G+G  P+   + S      H G         SG++   Q+S   WS  S   Q SG
Sbjct: 2061 RHGSGSGQFPISGQQGS------HHGHSSSSGTHNSGSS---QSSSTQWSHGSGSEQSSG 2111

Query: 495  LQQYATRS 518
            L  Y + S
Sbjct: 2112 LGHYGSTS 2119



 Score = 27.7 bits (60), Expect(2) = 6.6
 Identities = 22/68 (32%), Positives = 29/68 (42%)
 Frame = +3

Query: 315  RHGHGNGSSPLHMARCSSMFIRCHCGR*EGWACFPSGTARPTQASKDGWSRVSIGLQQSG 494
            RHG G+G  P+   + S      H G         SG++   Q+S   WS  S   Q SG
Sbjct: 2403 RHGSGSGQFPISGQQGS------HHGHSSSSGTHNSGSS---QSSSTQWSHGSGSEQSSG 2453

Query: 495  LQQYATRS 518
            L  Y + S
Sbjct: 2454 LGHYGSTS 2461



 Score = 21.6 bits (44), Expect(2) = 6.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 291 SKDSRHSERHGHGNGSS 341
           S++S  S+R+G G+G S
Sbjct: 615 SRESSTSQRYGSGSGES 631



 Score = 21.6 bits (44), Expect(2) = 6.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 291  SKDSRHSERHGHGNGSS 341
            S++S  S+R+G G+G S
Sbjct: 964  SRESSTSQRYGSGSGES 980



 Score = 21.6 bits (44), Expect(2) = 6.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 291  SKDSRHSERHGHGNGSS 341
            S++S  S+R+G G+G S
Sbjct: 1312 SRESSTSQRYGSGSGES 1328



 Score = 21.6 bits (44), Expect(2) = 6.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 291  SKDSRHSERHGHGNGSS 341
            S++S  S+R+G G+G S
Sbjct: 2008 SRESSTSQRYGSGSGES 2024



 Score = 21.6 bits (44), Expect(2) = 6.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 291  SKDSRHSERHGHGNGSS 341
            S++S  S+R+G G+G S
Sbjct: 2350 SRESSTSQRYGSGSGES 2366


>sp|Q5ZM39|BCL6_CHICK B-cell lymphoma 6 protein homolog OS=Gallus
           gallus GN=BCL6 PE=2 SV=1
          Length = 708

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
 Frame = -2

Query: 405 TPLIARSGTV*TCCCNEP-----CVKGSYHCHGHGVLSVGSLWRIDSLCDVKVRFCAECN 241
           +PL   S    +C C  P     C+  S    G  +    S +  DS C+    FC EC+
Sbjct: 468 SPLYMHSSKCSSCGCQSPQHTEMCLHTSGSAFGEEMGETQSEYS-DSSCENGAFFCNECD 526

Query: 240 CRFA 229
           CRF+
Sbjct: 527 CRFS 530


>sp|A8MTL4|KR41X_HUMAN Putative keratin-associated protein 4-X
           OS=Homo sapiens PE=5 SV=1
          Length = 155

 Score = 25.8 bits (55), Expect(2) = 4.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 526 KMQLLVAYCCSPDCCKP 476
           K Q   + CC P CC+P
Sbjct: 96  KPQCCQSVCCQPTCCRP 112



 Score = 24.6 bits (52), Expect(2) = 4.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 502 CCSPDCCKPMLTL 464
           CC P CC+P   L
Sbjct: 109 CCRPSCCRPCCCL 121


>sp|P60370|KR105_HUMAN Keratin-associated protein 10-5 OS=Homo
           sapiens GN=KRTAP10-5 PE=2 SV=2
          Length = 271

 Score = 24.3 bits (51), Expect(3) = 4.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 502 CCSPDCCKPM 473
           CC P CCKP+
Sbjct: 130 CCVPVCCKPV 139



 Score = 22.7 bits (47), Expect(3) = 4.3
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -1

Query: 511 VAYCCSPDCCKP 476
           V  CC P CC P
Sbjct: 90  VPVCCKPVCCLP 101



 Score = 21.6 bits (44), Expect(3) = 4.3
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -2

Query: 372 TCCCNEPCVKGSY 334
           TCC + PC +  Y
Sbjct: 161 TCCTSSPCQQSCY 173


>sp|Q9Y2J0|RP3A_HUMAN Rabphilin-3A OS=Homo sapiens GN=RPH3A PE=1
           SV=1
          Length = 694

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 33/100 (33%), Positives = 40/100 (40%), Gaps = 9/100 (9%)
 Frame = -2

Query: 654 GPCTKSKPENAITKKRGLFGAVVLRASFKREARAKPLQAGSTERCNSW*HTAVA------ 493
           GP  K+ P+ A    RG +G  V RAS   EAR     + S+    SW H+  A      
Sbjct: 211 GPGQKTGPDPASAPGRGNYGPPVRRAS---EAR----MSSSSRDSESWDHSGGAGDSSRS 263

Query: 492 ---LIAANQC*PCSTHPLKPASGAPSQRGSRPTPLIARSG 382
              L  AN        P    S AP Q G   TP  +R G
Sbjct: 264 PAGLRRANSVQASRPAPGSVQSPAPPQPGQPGTPGGSRPG 303


>sp|P77668|HYFI_ECOLI Hydrogenase-4 component I OS=Escherichia coli
           (strain K12) GN=hyfI PE=3 SV=1
          Length = 252

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = +2

Query: 353 GSLQQHVHTVPLRAMRGVGLLPLWDGAPDAGFKGWVEQGQHWFAAIRATAVCYQEL-HLS 529
           G LQQ +H V  R   GV + PLW   P +       + +      +   +C + L HLS
Sbjct: 157 GLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLS 216

Query: 530 VDP 538
            DP
Sbjct: 217 DDP 219


>sp|P34250|YKK5_YEAST Uncharacterized protein YKL105C OS=Saccharomyces
            cerevisiae GN=YKL105C PE=1 SV=1
          Length = 1132

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +3

Query: 168  ISSRRATLRAGQRSLPRPISLQIGNCIPHRNGP*H--HTVNRFSKDSRHSERHGH 326
            IS   ATL +    LP  + L +   I  +NG  H  H  +   KD  H +RHGH
Sbjct: 1065 ISGGTATLESSNPDLPTALPLSVPVTIIDKNGEIHKLHNDDAAIKDKSH-DRHGH 1118


>sp|Q59U81|SWR1_CANAL Helicase SWR1 OS=Candida albicans GN=SWR1 PE=3
           SV=1
          Length = 1641

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 442 CVGRAVPEGKQAHPSHRPQWHRMNM 368
           C+ + VP     HPSH PQW   N+
Sbjct: 259 CIKKTVPPPLVTHPSHIPQWRPENL 283
tr_hit_id A6FMP9
Definition tr|A6FMP9|A6FMP9_9RHOB Putative uncharacterized protein OS=Roseobacter sp. AzwK-3b
Align length 64
Score (bit) 35.0
E-value 4.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948819|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_F07, 5'
         (670 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6FMP9|A6FMP9_9RHOB Putative uncharacterized protein OS=Roseo...    35   4.3  
tr|Q98NX3|Q98NX3_RHILO Antirestriction protein; ArdC OS=Rhizobiu...    35   5.6  
tr|A7RPV4|A7RPV4_NEMVE Predicted protein OS=Nematostella vectens...    35   5.6  
tr|Q8HZP8|Q8HZP8_PANTR Cation channel of sperm (Fragment) OS=Pan...    34   9.4  
tr|Q6TYQ2|Q6TYQ2_PANTR Sperm ion channel (Fragment) OS=Pan trogl...    34   9.4  
tr|Q6TYQ1|Q6TYQ1_PANPA Sperm ion channel (Fragment) OS=Pan panis...    34   9.4  
tr|Q6TYQ0|Q6TYQ0_9PRIM Sperm ion channel (Fragment) OS=Gorilla g...    34   9.4  
tr|A0B6X6|A0B6X6_METTP Signal sequence peptidase OS=Methanosaeta...    34   9.5  

>tr|A6FMP9|A6FMP9_9RHOB Putative uncharacterized protein
           OS=Roseobacter sp. AzwK-3b GN=RAZWK3B_09046 PE=4 SV=1
          Length = 135

 Score = 35.0 bits (79), Expect = 4.3
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
 Frame = +2

Query: 374 HTVPL----RAMRGVGLLPLWDGAPDA---GFKGWVEQG-QHWFAAIRATAVCYQELHLS 529
           HT PL      + GVGL+ L DGAP     G   W+  G +HW  A   T +C    HL+
Sbjct: 53  HTHPLGQTLHVVSGVGLVALRDGAPQVIQPGDTVWIPPGEEHWHGAAPETMMC----HLA 108

Query: 530 VDPA 541
           +  A
Sbjct: 109 IQEA 112


>tr|Q98NX3|Q98NX3_RHILO Antirestriction protein; ArdC OS=Rhizobium
           loti GN=mlr9701 PE=4 SV=1
          Length = 320

 Score = 34.7 bits (78), Expect = 5.6
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
 Frame = +2

Query: 221 NILANRQLHSAQKRTLTSH-SESILQRLPTLRTPWPWQW*LPFTHGSLQQHVHTVPLRAM 397
           ++  NR   +A +  L    +  I+  L   R PW   W       SL    +    RA 
Sbjct: 2   SVRTNRTHDAADRSNLYDEITGKIIAELEAGRFPWVQPWGASAADASLSLPTNASTHRAY 61

Query: 398 RGVGLLPLWDGAPDAGF--KGWVEQGQ 472
            G+ +L LWD   + GF  + W+   Q
Sbjct: 62  SGINVLILWDAVVECGFPTQNWITYRQ 88


>tr|A7RPV4|A7RPV4_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g200317 PE=4 SV=1
          Length = 1120

 Score = 34.7 bits (78), Expect = 5.6
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
 Frame = +2

Query: 59  FPHALN*VLSTPLLPTVGWPLFIRSASSMISP*SRLD*QQASYFACWPE-ISSASNILAN 235
           +PH L+     P + T  WP ++ SA ++I+              CWP  ++SA NI+  
Sbjct: 706 WPHHLD---QAPKIVT-HWPHYLNSAPNIIN--------------CWPHHLNSAPNIINC 747

Query: 236 RQLHSAQKRTLTSHSESILQRLPTLRTPWP 325
              H  Q   + SH    L + P + T WP
Sbjct: 748 WPHHLNQAPNIVSHWPHHLDQAPNIVTHWP 777


>tr|Q8HZP8|Q8HZP8_PANTR Cation channel of sperm (Fragment) OS=Pan
           troglodytes GN=CATSPER PE=4 SV=1
          Length = 401

 Score = 33.9 bits (76), Expect = 9.4
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = +3

Query: 246 IPHRNGP*HHTVNRFSKDSRHSERHGHGNGSSPLH 350
           +PHR  P HH V+   + SRH E H H  G SP H
Sbjct: 212 VPHRGWPHHHQVHHHGR-SRHHEAHQH--GKSPHH 243


>tr|Q6TYQ2|Q6TYQ2_PANTR Sperm ion channel (Fragment) OS=Pan
           troglodytes GN=CATSPER1 PE=4 SV=1
          Length = 405

 Score = 33.9 bits (76), Expect = 9.4
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = +3

Query: 246 IPHRNGP*HHTVNRFSKDSRHSERHGHGNGSSPLH 350
           +PHR  P HH V+   + SRH E H H  G SP H
Sbjct: 212 VPHRGWPHHHQVHHHGR-SRHHEAHQH--GKSPHH 243


>tr|Q6TYQ1|Q6TYQ1_PANPA Sperm ion channel (Fragment) OS=Pan paniscus
           GN=CATSPER1 PE=4 SV=1
          Length = 405

 Score = 33.9 bits (76), Expect = 9.4
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = +3

Query: 246 IPHRNGP*HHTVNRFSKDSRHSERHGHGNGSSPLH 350
           +PHR  P HH V+   + SRH E H H  G SP H
Sbjct: 212 VPHRGWPHHHQVHHHGR-SRHHEAHQH--GKSPHH 243


>tr|Q6TYQ0|Q6TYQ0_9PRIM Sperm ion channel (Fragment) OS=Gorilla
           gorilla GN=CATSPER1 PE=4 SV=1
          Length = 405

 Score = 33.9 bits (76), Expect = 9.4
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = +3

Query: 246 IPHRNGP*HHTVNRFSKDSRHSERHGHGNGSSPLH 350
           +PHR  P HH V+   + SRH E H H  G SP H
Sbjct: 212 VPHRGWPHHHQVHHHGR-SRHHEAHQH--GKSPHH 243


>tr|A0B6X6|A0B6X6_METTP Signal sequence peptidase OS=Methanosaeta
           thermophila (strain DSM 6194 / PT) GN=Mthe_0660 PE=4
           SV=1
          Length = 219

 Score = 33.9 bits (76), Expect = 9.5
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +2

Query: 389 RAMRGVGL-LPLWDGAPDAGFKGWVEQGQH 475
           RAMR V +  P+WDG P A F G++ +G H
Sbjct: 93  RAMRWVEMGEPMWDGGPPAPFAGYITKGDH 122