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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948833
Clone id TST38A01NGRL0004_F21
Library
Length 345
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_F21. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CAGCTTGGCAAATACTCAGCAGAGGGAGAGAGTGAAGAGGCCAAGAAGGGTATGTTTGTC
GCTGGGTATACATACTAAGAAGATAGTTTGTACCCATTTTGGTTCTGTGATCTGTCCAAT
CGTGTGAATCACCACCACTCACTATATGCTCTCTGCAGTTGTATATGCTGCCTAGTCAGT
AAATTGTGAAAGGGATATGAGGTACCAAGTTTTTAATGTTATGGTAAACCTCCATTTGTT
GTATGCTGAGCAACTTGATTTGCCCATGTATCTTACATTATGGCAATCAGTTTGTGTTGG
CTCTTCTGGCCTTTTCAATTGCGGAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9ZU52
Definition sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana
Align length 25
Score (bit) 50.1
E-value 4.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948833|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_F21, 5'
         (324 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3,...    50   4e-06
sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2,...    48   1e-05
sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1,...    48   1e-05
sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplas...    42   0.001
sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplast...    40   0.005
sp|P16096|ALFC_SPIOL Fructose-bisphosphate aldolase, chloroplast...    36   0.053
sp|Q01517|ALFC2_PEA Fructose-bisphosphate aldolase 2, chloroplas...    32   1.0  
sp|Q89AY6|PMBA_BUCBP Protein pmbA homolog OS=Buchnera aphidicola...    31   1.7  
sp|Q8N4F7|RN175_HUMAN RING finger protein 175 OS=Homo sapiens GN...    31   2.2  
sp|P49035|SUS1_DAUCA Sucrose synthase isoform 1 OS=Daucus carota...    30   2.8  
sp|Q66G57|BTUB_YERPS Vitamin B12 transporter btuB OS=Yersinia ps...    30   4.8  
sp|A7FD14|BTUB_YERP3 Vitamin B12 transporter btuB OS=Yersinia ps...    30   4.8  
sp|Q6NU51|SH34B_XENLA SH3 domain-binding protein 4-B OS=Xenopus ...    29   8.2  

>sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3,
           chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1
          Length = 391

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLGKYSAEGE+E+AKKGMFV GYTY
Sbjct: 367 QLGKYSAEGENEDAKKGMFVKGYTY 391


>sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2,
           chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1
          Length = 398

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLGKY+ EGESEEAK+GMFV GYTY
Sbjct: 374 QLGKYTGEGESEEAKEGMFVKGYTY 398


>sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1,
           chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2
          Length = 399

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLGKY+ EGESEEAK+GMFV GYTY
Sbjct: 375 QLGKYTGEGESEEAKEGMFVKGYTY 399


>sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplastic
           (Fragment) OS=Pisum sativum PE=1 SV=1
          Length = 356

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLGKY  +GESEEAKK +FV GY+Y
Sbjct: 332 QLGKYYGDGESEEAKKELFVKGYSY 356


>sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplastic
           OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1
           SV=2
          Length = 388

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 16/25 (64%), Positives = 21/25 (84%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLGKY+++GE+ EAK+GMFV  Y Y
Sbjct: 364 QLGKYTSDGEAAEAKEGMFVKNYVY 388


>sp|P16096|ALFC_SPIOL Fructose-bisphosphate aldolase, chloroplastic
           OS=Spinacia oleracea PE=1 SV=3
          Length = 394

 Score = 36.2 bits (82), Expect = 0.053
 Identities = 19/26 (73%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFV-AGYTY 75
           QLGKY+ EGESEE KK MFV A  TY
Sbjct: 369 QLGKYTGEGESEERKKDMFVKATLTY 394


>sp|Q01517|ALFC2_PEA Fructose-bisphosphate aldolase 2, chloroplastic
           OS=Pisum sativum PE=1 SV=2
          Length = 349

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 16/25 (64%), Positives = 18/25 (72%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLGKY  +GESEEAKK     GY+Y
Sbjct: 326 QLGKYIGDGESEEAKKDC-CQGYSY 349


>sp|Q89AY6|PMBA_BUCBP Protein pmbA homolog OS=Buchnera aphidicola
           subsp. Baizongia pistaciae GN=pmbA PE=3 SV=1
          Length = 448

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +2

Query: 5   LANTQQRERVKRPRRVCLSLGIHTKKIVCTH-FGSVICPIV*ITTTHYMLSAVVYAA*SV 181
           +A   +RE  K  +R+  S G     +V T  FG+ +  I   +TT Y  S  V A  + 
Sbjct: 137 IAKLSEREAFKEDKRIINSEGSCFNSLVRTRAFGNSLGMIECYSTTLYSTSCCVIAGDNG 196

Query: 182 NCERDMRYQVFNVMVNLHL 238
           + +RD  + V   M +L+L
Sbjct: 197 DMQRDFSFSVSRDMNDLNL 215


>sp|Q8N4F7|RN175_HUMAN RING finger protein 175 OS=Homo sapiens
           GN=RNF175 PE=2 SV=1
          Length = 328

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 194 DMRYQVFNVMVNLHLLYAEQLDLPMYLTLWQSVCVG 301
           D++  + N     H LY + LD   YL  WQ V +G
Sbjct: 281 DLKRMISNPWERTHFLYGQILDWLRYLVAWQPVVIG 316


>sp|P49035|SUS1_DAUCA Sucrose synthase isoform 1 OS=Daucus carota
           PE=2 SV=1
          Length = 808

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 218 VMVNLHLLYAEQLDLPMYLTLWQSVCVGSS 307
           V VN+H L  E+L +P YL   + + +GSS
Sbjct: 100 VRVNVHHLVVEELSVPQYLQFKEELVIGSS 129
tr_hit_id Q8GV31
Definition tr|Q8GV31|Q8GV31_SOLBR Plastidic aldolase (Fragment) OS=Solanum brevidens
Align length 25
Score (bit) 52.4
E-value 1.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948833|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_F21, 5'
         (324 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8GV31|Q8GV31_SOLBR Plastidic aldolase (Fragment) OS=Solanum ...    52   1e-05
tr|Q38JH2|Q38JH2_SOLTU Fructose-bisphosphate aldolase OS=Solanum...    52   1e-05
tr|A7P3F7|A7P3F7_VITVI Fructose-bisphosphate aldolase OS=Vitis v...    52   1e-05
tr|Q41992|Q41992_ARATH ALDOLASE (Fragment) OS=Arabidopsis thalia...    50   6e-05
tr|B8LMQ9|B8LMQ9_PICSI Putative uncharacterized protein OS=Picea...    50   6e-05
tr|A9NX65|A9NX65_PICSI Fructose-bisphosphate aldolase OS=Picea s...    50   6e-05
tr|A9NVA7|A9NVA7_PICSI Fructose-bisphosphate aldolase OS=Picea s...    50   6e-05
tr|A9NUH5|A9NUH5_PICSI Fructose-bisphosphate aldolase OS=Picea s...    50   6e-05
tr|A9U3R4|A9U3R4_PHYPA Fructose-bisphosphate aldolase OS=Physcom...    50   7e-05
tr|A9RX76|A9RX76_PHYPA Fructose-bisphosphate aldolase OS=Physcom...    50   7e-05
tr|A9PEU6|A9PEU6_POPTR Fructose-bisphosphate aldolase OS=Populus...    49   1e-04
tr|Q56ZF2|Q56ZF2_ARATH Fructose bisphosphate aldolase like prote...    48   2e-04
tr|A9TPN5|A9TPN5_PHYPA Fructose-bisphosphate aldolase OS=Physcom...    48   2e-04
tr|Q9SXX4|Q9SXX4_NICPA Fructose-bisphosphate aldolase OS=Nicotia...    48   3e-04
tr|Q8LL68|Q8LL68_HEVBR Fructose-bisphosphate aldolase OS=Hevea b...    48   3e-04
tr|A5BDH7|A5BDH7_VITVI Fructose-bisphosphate aldolase OS=Vitis v...    48   3e-04
tr|A9NUC9|A9NUC9_PICSI Fructose-bisphosphate aldolase OS=Picea s...    47   4e-04
tr|A9T663|A9T663_PHYPA Fructose-bisphosphate aldolase OS=Physcom...    47   5e-04
tr|B0YQX2|B0YQX2_GOSAR Fructose-bisphosphate aldolase OS=Gossypi...    46   8e-04
tr|A6Y873|A6Y873_GOSAR Fructose-bisphosphate aldolase OS=Gossypi...    46   8e-04
tr|Q9SXX5|Q9SXX5_NICPA Fructose-bisphosphate aldolase OS=Nicotia...    45   0.002
tr|Q94JJ0|Q94JJ0_ORYSJ Fructose-bisphosphate aldolase OS=Oryza s...    45   0.002
tr|P93565|P93565_SOLTU Fructose-bisphosphate aldolase (Fragment)...    45   0.002
tr|B0FPD8|B0FPD8_SOLTU Fructose-bisphosphate aldolase OS=Solanum...    45   0.002
tr|A7QE19|A7QE19_VITVI Fructose-bisphosphate aldolase OS=Vitis v...    45   0.002
tr|A9PJ44|A9PJ44_POPJC Fructose-bisphosphate aldolase OS=Populus...    44   0.003
tr|A9PGW0|A9PGW0_POPTR Fructose-bisphosphate aldolase OS=Populus...    44   0.003
tr|B7FIL9|B7FIL9_MEDTR Putative uncharacterized protein OS=Medic...    44   0.004
tr|B6UDN1|B6UDN1_MAIZE Fructose-bisphosphate aldolase OS=Zea may...    44   0.004
tr|B4FV58|B4FV58_MAIZE Putative uncharacterized protein OS=Zea m...    44   0.004

>tr|Q8GV31|Q8GV31_SOLBR Plastidic aldolase (Fragment) OS=Solanum
           brevidens PE=2 SV=1
          Length = 151

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLGKYSAEGESEEAKKGMFV GYTY
Sbjct: 127 QLGKYSAEGESEEAKKGMFVKGYTY 151


>tr|Q38JH2|Q38JH2_SOLTU Fructose-bisphosphate aldolase OS=Solanum
           tuberosum PE=2 SV=1
          Length = 346

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLGKYSAEGESEEAKKGMFV GYTY
Sbjct: 322 QLGKYSAEGESEEAKKGMFVKGYTY 346


>tr|A7P3F7|A7P3F7_VITVI Fructose-bisphosphate aldolase OS=Vitis
           vinifera GN=GSVIVT00030426001 PE=3 SV=1
          Length = 393

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLGKYSAEGESEEAKKGMFV GYTY
Sbjct: 369 QLGKYSAEGESEEAKKGMFVQGYTY 393


>tr|Q41992|Q41992_ARATH ALDOLASE (Fragment) OS=Arabidopsis thaliana
           PE=2 SV=1
          Length = 70

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLGKYSAEGE+E+AKKGMFV GYTY
Sbjct: 46  QLGKYSAEGENEDAKKGMFVKGYTY 70


>tr|B8LMQ9|B8LMQ9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 257

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLG+YSAEGESEE+KKGMFV GYTY
Sbjct: 233 QLGRYSAEGESEESKKGMFVKGYTY 257


>tr|A9NX65|A9NX65_PICSI Fructose-bisphosphate aldolase OS=Picea
           sitchensis PE=2 SV=1
          Length = 393

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLG+YSAEGESEE+KKGMFV GYTY
Sbjct: 369 QLGRYSAEGESEESKKGMFVKGYTY 393


>tr|A9NVA7|A9NVA7_PICSI Fructose-bisphosphate aldolase OS=Picea
           sitchensis PE=2 SV=1
          Length = 393

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLG+YSAEGESEE+KKGMFV GYTY
Sbjct: 369 QLGRYSAEGESEESKKGMFVKGYTY 393


>tr|A9NUH5|A9NUH5_PICSI Fructose-bisphosphate aldolase OS=Picea
           sitchensis PE=2 SV=1
          Length = 393

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLG+YSAEGESEE+KKGMFV GYTY
Sbjct: 369 QLGRYSAEGESEESKKGMFVKGYTY 393


>tr|A9U3R4|A9U3R4_PHYPA Fructose-bisphosphate aldolase
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_155603 PE=3 SV=1
          Length = 386

 Score = 49.7 bits (117), Expect = 7e-05
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLGKYSAEGE+EEAK+GMFV GYTY
Sbjct: 362 QLGKYSAEGEAEEAKQGMFVKGYTY 386


>tr|A9RX76|A9RX76_PHYPA Fructose-bisphosphate aldolase
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_120582 PE=3 SV=1
          Length = 386

 Score = 49.7 bits (117), Expect = 7e-05
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +1

Query: 1   QLGKYSAEGESEEAKKGMFVAGYTY 75
           QLGKYSAEGE+EEAK+GMFV GYTY
Sbjct: 362 QLGKYSAEGEAEEAKQGMFVKGYTY 386