| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948853|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_G17, 5'
(673 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q94901|LARK_DROME RNA-binding protein lark OS=Drosophila mela... 60 1e-08
sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-r... 58 5e-08
sp|P62634|CNBP_RAT Cellular nucleic acid-binding protein OS=Ratt... 56 2e-07
sp|Q5R5R5|CNBP_PONAB Cellular nucleic acid-binding protein OS=Po... 56 2e-07
sp|P53996|CNBP_MOUSE Cellular nucleic acid-binding protein OS=Mu... 56 2e-07
sp|P62633|CNBP_HUMAN Cellular nucleic acid-binding protein OS=Ho... 56 2e-07
sp|O42395|CNBP_CHICK Cellular nucleic acid-binding protein OS=Ga... 56 2e-07
sp|Q3T0Q6|CNBP_BOVIN Cellular nucleic acid-binding protein OS=Bo... 56 2e-07
sp|Q6DII2|SFRS1_XENTR Splicing factor, arginine/serine-rich 1 OS... 55 3e-07
sp|Q77373|POL_HV1AN Gag-Pol polyprotein OS=Human immunodeficienc... 55 4e-07
sp|Q77372|GAG_HV1AN Gag polyprotein OS=Human immunodeficiency vi... 55 4e-07
sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania maj... 53 1e-06
sp|Q6NYA0|SFRS1_DANRE Splicing factor, arginine/serine-rich 1 OS... 52 2e-06
sp|Q6IQ97|RBM41_DANRE RNA-binding protein 4.1 OS=Danio rerio GN=... 52 2e-06
sp|Q8AII1|POL_SIVTN Gag-Pol polyprotein OS=Simian immunodeficien... 52 2e-06
sp|P17283|POL_SIVCZ Gag-Pol polyprotein OS=Simian immunodeficien... 52 2e-06
sp|Q8AII2|GAG_SIVTN Gag polyprotein OS=Simian immunodeficiency v... 52 2e-06
sp|P17282|GAG_SIVCZ Gag polyprotein OS=Simian immunodeficiency v... 52 2e-06
sp|Q1A249|POL_SIVEK Gag-Pol polyprotein OS=Simian immunodeficien... 52 3e-06
sp|Q9IDV9|POL_HV1YB Gag-Pol polyprotein OS=Human immunodeficienc... 52 3e-06
sp|Q1A250|GAG_SIVEK Gag polyprotein OS=Simian immunodeficiency v... 52 3e-06
sp|Q9IDV8|GAG_HV1YB Gag polyprotein OS=Human immunodeficiency vi... 52 3e-06
sp|Q8WW36|ZCH13_HUMAN Zinc finger CCHC domain-containing protein... 52 4e-06
sp|Q5R7H2|SFRS1_PONAB Splicing factor, arginine/serine-rich 1 OS... 52 4e-06
sp|Q3YLA6|SFRS1_PIG Splicing factor, arginine/serine-rich 1 OS=S... 52 4e-06
sp|Q6PDM2|SFRS1_MOUSE Splicing factor, arginine/serine-rich 1 OS... 52 4e-06
sp|Q07955|SFRS1_HUMAN Splicing factor, arginine/serine-rich 1 OS... 52 4e-06
sp|Q5ZML3|SFRS1_CHICK Splicing factor, arginine/serine-rich 1 OS... 52 4e-06
sp|Q0VCY7|SFRS1_BOVIN Splicing factor, arginine/serine-rich 1 OS... 52 4e-06
sp|Q7SXP4|SF1L1_DANRE Splicing factor, arginine/serine-rich 1-li... 52 4e-06
>sp|Q94901|LARK_DROME RNA-binding protein lark OS=Drosophila
melanogaster GN=lark PE=1 SV=1
Length = 352
Score = 60.1 bits (144), Expect = 1e-08
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +2
Query: 140 TRLYVGHISSRTRTRDLEDLFSKYGRIRDVDMKQXXXXXXXXXXXXXXXXRHYLNGRNFD 319
T+++VG+++ +TR ++ +LF KYG + + D+ + LNGR D
Sbjct: 86 TKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIKELNGRVVD 145
Query: 320 GSRIAVEFAKRGPRGAGGVREYVGRGPTPGTG---RCYNCGHDGHWARDC 460
G + V+ + R P PG G +CY CG GHW+++C
Sbjct: 146 GQPLKVQVSTSRVR------------PKPGMGDPEQCYRCGRSGHWSKEC 183
Score = 34.7 bits (78), Expect = 0.47
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 131 SGPTRLYVGHISSRTRTRDLEDLFSKYGRIRDVDMKQXXXXXXXXXXXXXXXXRHYLNGR 310
+G +L++G++ +T+ +L LF KYG + + D+ + LNG
Sbjct: 4 AGTFKLFIGNLDEKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGY 63
Query: 311 NFDGSRIAVEFAK 349
+ I VE AK
Sbjct: 64 TLNEFAIKVEAAK 76
>sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-rich
1 OS=Caenorhabditis elegans GN=rsp-1 PE=2 SV=1
Length = 312
Score = 57.8 bits (138), Expect = 5e-08
Identities = 31/89 (34%), Positives = 45/89 (50%)
Frame = +2
Query: 143 RLYVGHISSRTRTRDLEDLFSKYGRIRDVDMKQXXXXXXXXXXXXXXXXRHYLNGRNFDG 322
R+Y+G ++SR +D+E F YG+IRDV +K H LNG+ G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 323 SRIAVEFAKRGPRGAGGVREYVGRGPTPG 409
R+ ++++K PRG GG R G G G
Sbjct: 64 ERVILDYSK--PRGGGGDRGGFGGGGRGG 90
>sp|P62634|CNBP_RAT Cellular nucleic acid-binding protein OS=Rattus
norvegicus GN=Cnbp PE=2 SV=1
Length = 177
Score = 56.2 bits (134), Expect = 2e-07
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
CYNCG GH ARDC D + KCY CG+ GHI++DC
Sbjct: 98 CYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDC 132
Score = 50.8 bits (120), Expect = 6e-06
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNK--CYRCGQRGHIERDC 526
CYNCG GH A+DCK + + CY CG+ GH+ RDC
Sbjct: 74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 48.1 bits (113), Expect = 4e-05
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
CY CG GH A+DC + + CY CG+ GHI +DC
Sbjct: 54 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDC 87
Score = 47.4 bits (111), Expect = 7e-05
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 26/65 (40%)
Frame = +2
Query: 410 TGRCYNCGHDGHWARDCKAGDWKNK--------------------------CYRCGQRGH 511
+ C+ CG GHWAR+C G + + CYRCG+ GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 512 IERDC 526
+ +DC
Sbjct: 63 LAKDC 67
Score = 46.6 bits (109), Expect = 1e-04
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 416 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
+CY+CG GH +DC K KCYRCG+ GH+ +C
Sbjct: 118 KCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 150
Score = 46.2 bits (108), Expect = 2e-04
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 416 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
+CY CG GH A +C N CYRCG+ GH+ R+C
Sbjct: 136 KCYRCGETGHVAINCSKTSEVN-CYRCGESGHLAREC 171
>sp|Q5R5R5|CNBP_PONAB Cellular nucleic acid-binding protein OS=Pongo
abelii GN=CNBP PE=2 SV=1
Length = 177
Score = 56.2 bits (134), Expect = 2e-07
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
CYNCG GH ARDC D + KCY CG+ GHI++DC
Sbjct: 98 CYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDC 132
Score = 50.8 bits (120), Expect = 6e-06
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNK--CYRCGQRGHIERDC 526
CYNCG GH A+DCK + + CY CG+ GH+ RDC
Sbjct: 74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 48.1 bits (113), Expect = 4e-05
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
CY CG GH A+DC + + CY CG+ GHI +DC
Sbjct: 54 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDC 87
Score = 47.4 bits (111), Expect = 7e-05
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 26/65 (40%)
Frame = +2
Query: 410 TGRCYNCGHDGHWARDCKAGDWKNK--------------------------CYRCGQRGH 511
+ C+ CG GHWAR+C G + + CYRCG+ GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 512 IERDC 526
+ +DC
Sbjct: 63 LAKDC 67
Score = 46.6 bits (109), Expect = 1e-04
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 416 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
+CY+CG GH +DC K KCYRCG+ GH+ +C
Sbjct: 118 KCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 150
Score = 46.2 bits (108), Expect = 2e-04
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 416 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
+CY CG GH A +C N CYRCG+ GH+ R+C
Sbjct: 136 KCYRCGETGHVAINCSKTSEVN-CYRCGESGHLAREC 171
>sp|P53996|CNBP_MOUSE Cellular nucleic acid-binding protein OS=Mus
musculus GN=Cnbp PE=2 SV=2
Length = 178
Score = 56.2 bits (134), Expect = 2e-07
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
CYNCG GH ARDC D + KCY CG+ GHI++DC
Sbjct: 99 CYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDC 133
Score = 50.8 bits (120), Expect = 6e-06
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNK--CYRCGQRGHIERDC 526
CYNCG GH A+DCK + + CY CG+ GH+ RDC
Sbjct: 75 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Score = 47.4 bits (111), Expect = 7e-05
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 26/65 (40%)
Frame = +2
Query: 410 TGRCYNCGHDGHWARDCKAGDWKNK--------------------------CYRCGQRGH 511
+ C+ CG GHWAR+C G + + CYRCG+ GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 512 IERDC 526
+ +DC
Sbjct: 63 LAKDC 67
Score = 46.6 bits (109), Expect = 1e-04
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 416 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
+CY+CG GH +DC K KCYRCG+ GH+ +C
Sbjct: 119 KCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 151
Score = 46.2 bits (108), Expect = 2e-04
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 416 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
+CY CG GH A +C N CYRCG+ GH+ R+C
Sbjct: 137 KCYRCGETGHVAINCSKTSEVN-CYRCGESGHLAREC 172
>sp|P62633|CNBP_HUMAN Cellular nucleic acid-binding protein OS=Homo
sapiens GN=CNBP PE=1 SV=1
Length = 177
Score = 56.2 bits (134), Expect = 2e-07
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
CYNCG GH ARDC D + KCY CG+ GHI++DC
Sbjct: 98 CYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDC 132
Score = 50.8 bits (120), Expect = 6e-06
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNK--CYRCGQRGHIERDC 526
CYNCG GH A+DCK + + CY CG+ GH+ RDC
Sbjct: 74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 48.1 bits (113), Expect = 4e-05
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
CY CG GH A+DC + + CY CG+ GHI +DC
Sbjct: 54 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDC 87
Score = 47.4 bits (111), Expect = 7e-05
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 26/65 (40%)
Frame = +2
Query: 410 TGRCYNCGHDGHWARDCKAGDWKNK--------------------------CYRCGQRGH 511
+ C+ CG GHWAR+C G + + CYRCG+ GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 512 IERDC 526
+ +DC
Sbjct: 63 LAKDC 67
Score = 46.6 bits (109), Expect = 1e-04
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 416 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
+CY+CG GH +DC K KCYRCG+ GH+ +C
Sbjct: 118 KCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 150
Score = 46.2 bits (108), Expect = 2e-04
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 416 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
+CY CG GH A +C N CYRCG+ GH+ R+C
Sbjct: 136 KCYRCGETGHVAINCSKTSEVN-CYRCGESGHLAREC 171
>sp|O42395|CNBP_CHICK Cellular nucleic acid-binding protein
OS=Gallus gallus GN=CNBP PE=2 SV=1
Length = 172
Score = 56.2 bits (134), Expect = 2e-07
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
CYNCG GH ARDC D + KCY CG+ GHI++DC
Sbjct: 93 CYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDC 127
Score = 50.8 bits (120), Expect = 6e-06
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNK--CYRCGQRGHIERDC 526
CYNCG GH A+DCK + + CY CG+ GH+ RDC
Sbjct: 69 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 106
Score = 48.5 bits (114), Expect = 3e-05
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 20/59 (33%)
Frame = +2
Query: 410 TGRCYNCGHDGHWARDCKAGDWKNK--------------------CYRCGQRGHIERDC 526
+ C+ CG GHWAR+C G + + CYRCG+ GH+ +DC
Sbjct: 3 SNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDC 61
Score = 46.6 bits (109), Expect = 1e-04
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 416 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
+CY+CG GH +DC K KCYRCG+ GH+ +C
Sbjct: 113 KCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 145
Score = 46.2 bits (108), Expect = 2e-04
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 416 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
+CY CG GH A +C N CYRCG+ GH+ R+C
Sbjct: 131 KCYRCGETGHVAINCSKTSEVN-CYRCGESGHLAREC 166
>sp|Q3T0Q6|CNBP_BOVIN Cellular nucleic acid-binding protein OS=Bos
taurus GN=CNBP PE=2 SV=1
Length = 170
Score = 56.2 bits (134), Expect = 2e-07
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
CYNCG GH ARDC D + KCY CG+ GHI++DC
Sbjct: 91 CYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDC 125
Score = 50.8 bits (120), Expect = 6e-06
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNK--CYRCGQRGHIERDC 526
CYNCG GH A+DCK + + CY CG+ GH+ RDC
Sbjct: 67 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Score = 50.1 bits (118), Expect = 1e-05
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 19/58 (32%)
Frame = +2
Query: 410 TGRCYNCGHDGHWARDCKAGDWKNK-------------------CYRCGQRGHIERDC 526
+ C+ CG GHWAR+C G + + CYRCG+ GH+ +DC
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Score = 48.1 bits (113), Expect = 4e-05
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 419 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
CY CG GH A+DC + + CY CG+ GHI +DC
Sbjct: 47 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDC 80
Score = 46.6 bits (109), Expect = 1e-04
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 416 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
+CY+CG GH +DC K KCYRCG+ GH+ +C
Sbjct: 111 KCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 143
Score = 46.2 bits (108), Expect = 2e-04
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 416 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
+CY CG GH A +C N CYRCG+ GH+ R+C
Sbjct: 129 KCYRCGETGHVAINCSKTSEVN-CYRCGESGHLAREC 164
>sp|Q6DII2|SFRS1_XENTR Splicing factor, arginine/serine-rich 1
OS=Xenopus tropicalis GN=sfrs1 PE=2 SV=1
Length = 267
Score = 55.1 bits (131), Expect = 3e-07
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Frame = +2
Query: 143 RLYVGHISSRTRTRDLEDLFSKYGRIRDVDMKQXXXXXXXXXXXXXXXXR-----HYLNG 307
R+YVG++ RT+D+ED+F KYG IRD+D+K + +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 308 RNFDGSRIAVEFAKRGPRGAGGVREYVGRGPTPGTG 415
++DG R+ VEF + G RGAGG G G G G
Sbjct: 77 YDYDGYRLRVEFPRSG-RGAGGRGGGGGGGGGGGGG 111
>sp|Q77373|POL_HV1AN Gag-Pol polyprotein OS=Human immunodeficiency
virus type 1 (isolate ANT70 group O) GN=gag-pol PE=3
SV=3
Length = 1435
Score = 54.7 bits (130), Expect = 4e-07
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Frame = +2
Query: 383 YVGRGPTP---GTGRCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 526
++ RG P GT +C+NCG +GH AR+C+A K C++CGQ GH +DC
Sbjct: 381 FMQRGQNPIRKGTIKCFNCGKEGHIARNCRA-PRKKGCWKCGQEGHQMKDC 430
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948853|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_G17, 5'
(673 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7Q413|A7Q413_VITVI Chromosome chr13 scaffold_48, whole genom... 223 9e-57
tr|A9NYX0|A9NYX0_PICSI Putative uncharacterized protein OS=Picea... 221 3e-56
tr|A9NWL8|A9NWL8_PICSI Putative uncharacterized protein OS=Picea... 221 3e-56
tr|A7PSV4|A7PSV4_VITVI Chromosome chr8 scaffold_29, whole genome... 218 4e-55
tr|A5BRP3|A5BRP3_VITVI Putative uncharacterized protein OS=Vitis... 218 4e-55
tr|Q0DL70|Q0DL70_ORYSJ Os05g0120100 protein OS=Oryza sativa subs... 206 8e-52
tr|B6SRP6|B6SRP6_MAIZE Splicing factor, arginine/serine-rich 7 O... 206 8e-52
tr|A2XZS4|A2XZS4_ORYSI Putative uncharacterized protein OS=Oryza... 206 8e-52
tr|Q5ZCD9|Q5ZCD9_ORYSJ cDNA clone:006-311-F07, full insert seque... 206 1e-51
tr|A6MZ96|A6MZ96_ORYSI Splicing factor (Fragment) OS=Oryza sativ... 206 1e-51
tr|A2WKV5|A2WKV5_ORYSI Putative uncharacterized protein OS=Oryza... 206 1e-51
tr|Q2QKC1|Q2QKC1_WHEAT Alternative splicing regulator OS=Triticu... 205 2e-51
tr|B6T453|B6T453_MAIZE Splicing factor, arginine/serine-rich 6 O... 205 2e-51
tr|B6TAA2|B6TAA2_MAIZE Splicing factor, arginine/serine-rich 6 O... 204 4e-51
tr|B4FEY3|B4FEY3_MAIZE Putative uncharacterized protein OS=Zea m... 204 4e-51
tr|Q9FYA7|Q9FYA7_ARATH Splicing factor RSZ33 OS=Arabidopsis thal... 203 9e-51
tr|Q8VYA5|Q8VYA5_ARATH Putative uncharacterized protein At2g3734... 203 9e-51
tr|Q67Y02|Q67Y02_ARATH Putative uncharacterized protein At2g3734... 203 9e-51
tr|Q10N19|Q10N19_ORYSJ Os03g0285900 protein OS=Oryza sativa subs... 203 9e-51
tr|B8ALJ7|B8ALJ7_ORYSI Putative uncharacterized protein OS=Oryza... 203 9e-51
tr|Q9FYB7|Q9FYB7_ARATH Splicing factor-like protein OS=Arabidops... 196 1e-48
tr|A2ZPF6|A2ZPF6_ORYSJ Putative uncharacterized protein OS=Oryza... 183 8e-45
tr|Q8GZZ4|Q8GZZ4_ORYSJ Putative uncharacterized protein OSJNBa00... 181 4e-44
tr|A3AGS9|A3AGS9_ORYSJ Putative uncharacterized protein OS=Oryza... 181 4e-44
tr|Q75IR8|Q75IR8_ORYSJ Os05g0162600 protein OS=Oryza sativa subs... 149 2e-34
tr|A2Y0P9|A2Y0P9_ORYSI Putative uncharacterized protein OS=Oryza... 146 1e-33
tr|A9PGS4|A9PGS4_POPTR Putative uncharacterized protein OS=Popul... 145 2e-33
tr|Q9ZUT2|Q9ZUT2_ARATH Putative uncharacterized protein At2g3734... 137 6e-31
tr|Q3EBL3|Q3EBL3_ARATH Uncharacterized protein At2g37340.2 OS=Ar... 137 6e-31
tr|Q8LPN6|Q8LPN6_ARATH AT3g53500/F4P12_200 OS=Arabidopsis thalia... 130 8e-29
>tr|A7Q413|A7Q413_VITVI Chromosome chr13 scaffold_48, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029498001
PE=4 SV=1
Length = 288
Score = 223 bits (568), Expect = 9e-57
Identities = 100/139 (71%), Positives = 112/139 (80%)
Frame = +2
Query: 110 MPRYDERSGPTRLYVGHISSRTRTRDLEDLFSKYGRIRDVDMKQXXXXXXXXXXXXXXXX 289
MPRYD+R G TRLYVG +SSRTR+RDLEDLFS+YGR+RDVDMK
Sbjct: 1 MPRYDDRHGSTRLYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKHDFAFVEFSDPRDADDA 60
Query: 290 RHYLNGRNFDGSRIAVEFAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKAG 469
R+ LNGR+FDGSRI VEFAK GPRG GG REY+GRGP PG+GRC+NCG DGHWARDCKAG
Sbjct: 61 RYSLNGRDFDGSRIIVEFAKGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
Query: 470 DWKNKCYRCGQRGHIERDC 526
DWKNKCYRCG+RGHIER+C
Sbjct: 121 DWKNKCYRCGERGHIERNC 139
>tr|A9NYX0|A9NYX0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 316
Score = 221 bits (563), Expect = 3e-56
Identities = 99/141 (70%), Positives = 114/141 (80%), Gaps = 2/141 (1%)
Frame = +2
Query: 110 MPRYDERSGPTRLYVGHISSRTRTRDLEDLFSKYGRIRDVDMKQXXXXXXXXXXXXXXXX 289
MPRYD+RSG TRLYVG +SSRTRTRDLEDLF++YGR+RDVD+K
Sbjct: 1 MPRYDDRSGNTRLYVGRLSSRTRTRDLEDLFNRYGRVRDVDLKHDFAFIEFSDPRDADEA 60
Query: 290 RHYLNGRNFDGSRIAVEFAKRGPRGAGG--VREYVGRGPTPGTGRCYNCGHDGHWARDCK 463
R+YLNGR+ DGSRI VEFA+ GPRGA G REY+GRGP PG+GRC+NCG+DGHWARDCK
Sbjct: 61 RYYLNGRDLDGSRIVVEFARGGPRGAAGGRTREYLGRGPPPGSGRCFNCGNDGHWARDCK 120
Query: 464 AGDWKNKCYRCGQRGHIERDC 526
AGDWKNKCYRCG+RGHIER+C
Sbjct: 121 AGDWKNKCYRCGERGHIERNC 141
>tr|A9NWL8|A9NWL8_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 316
Score = 221 bits (563), Expect = 3e-56
Identities = 99/141 (70%), Positives = 114/141 (80%), Gaps = 2/141 (1%)
Frame = +2
Query: 110 MPRYDERSGPTRLYVGHISSRTRTRDLEDLFSKYGRIRDVDMKQXXXXXXXXXXXXXXXX 289
MPRYD+RSG TRLYVG +SSRTRTRDLEDLF++YGR+RDVD+K
Sbjct: 1 MPRYDDRSGNTRLYVGRLSSRTRTRDLEDLFNRYGRVRDVDLKHDFAFIEFSDPRDADEA 60
Query: 290 RHYLNGRNFDGSRIAVEFAKRGPRGAGG--VREYVGRGPTPGTGRCYNCGHDGHWARDCK 463
R+YLNGR+ DGSRI VEFA+ GPRGA G REY+GRGP PG+GRC+NCG+DGHWARDCK
Sbjct: 61 RYYLNGRDLDGSRIVVEFARGGPRGAAGGRTREYLGRGPPPGSGRCFNCGNDGHWARDCK 120
Query: 464 AGDWKNKCYRCGQRGHIERDC 526
AGDWKNKCYRCG+RGHIER+C
Sbjct: 121 AGDWKNKCYRCGERGHIERNC 141
>tr|A7PSV4|A7PSV4_VITVI Chromosome chr8 scaffold_29, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00023097001
PE=4 SV=1
Length = 283
Score = 218 bits (554), Expect = 4e-55
Identities = 100/140 (71%), Positives = 112/140 (80%), Gaps = 1/140 (0%)
Frame = +2
Query: 110 MPRYDERSGPTRLYVGHISSRTRTRDLEDLFSKYGRIRDVDMKQXXXXXXXXXXXXXXXX 289
MPRYD+R G TRLYVG +SSRTRTRDLE LFS+YGR+RDVDMK
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLESLFSRYGRVRDVDMKHDFAFVEFSDPRDADDA 60
Query: 290 RHYLNGRNFDGSRIAVEFAKRGPRG-AGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKA 466
R+ LNGR+FDGSRI VEFAK GPRG +GG REY+GRGP PG+GRC+NCG DGHWARDCKA
Sbjct: 61 RYNLNGRDFDGSRIIVEFAKGGPRGGSGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 120
Query: 467 GDWKNKCYRCGQRGHIERDC 526
GDWKNKCYRCG+RGHIER+C
Sbjct: 121 GDWKNKCYRCGERGHIERNC 140
>tr|A5BRP3|A5BRP3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_036556 PE=4 SV=1
Length = 306
Score = 218 bits (554), Expect = 4e-55
Identities = 100/140 (71%), Positives = 112/140 (80%), Gaps = 1/140 (0%)
Frame = +2
Query: 110 MPRYDERSGPTRLYVGHISSRTRTRDLEDLFSKYGRIRDVDMKQXXXXXXXXXXXXXXXX 289
MPRYD+R G TRLYVG +SSRTRTRDLE LFS+YGR+RDVDMK
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLESLFSRYGRVRDVDMKHDFAFVEFSDPRDADDA 60
Query: 290 RHYLNGRNFDGSRIAVEFAKRGPRG-AGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKA 466
R+ LNGR+FDGSRI VEFAK GPRG +GG REY+GRGP PG+GRC+NCG DGHWARDCKA
Sbjct: 61 RYNLNGRDFDGSRIIVEFAKGGPRGGSGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 120
Query: 467 GDWKNKCYRCGQRGHIERDC 526
GDWKNKCYRCG+RGHIER+C
Sbjct: 121 GDWKNKCYRCGERGHIERNC 140
>tr|Q0DL70|Q0DL70_ORYSJ Os05g0120100 protein OS=Oryza sativa subsp.
japonica GN=Os05g0120100 PE=4 SV=1
Length = 323
Score = 206 bits (525), Expect = 8e-52
Identities = 94/139 (67%), Positives = 109/139 (78%)
Frame = +2
Query: 110 MPRYDERSGPTRLYVGHISSRTRTRDLEDLFSKYGRIRDVDMKQXXXXXXXXXXXXXXXX 289
MPRYD+R G TRLYVG +SSRTR+RDLE FS+YGRIR+V++K+
Sbjct: 1 MPRYDDRYGSTRLYVGRLSSRTRSRDLEYHFSRYGRIREVELKRDYAFIEFSDPRDAEEA 60
Query: 290 RHYLNGRNFDGSRIAVEFAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKAG 469
R+ L+GR+ DGSRI VEFAK PRG GG REY+GRGP PGTGRC+NCG DGHWARDCKAG
Sbjct: 61 RYNLDGRDVDGSRILVEFAKGVPRGPGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAG 120
Query: 470 DWKNKCYRCGQRGHIERDC 526
DWKNKCYRCG+RGHIER+C
Sbjct: 121 DWKNKCYRCGERGHIERNC 139
>tr|B6SRP6|B6SRP6_MAIZE Splicing factor, arginine/serine-rich 7
OS=Zea mays PE=2 SV=1
Length = 333
Score = 206 bits (525), Expect = 8e-52
Identities = 93/139 (66%), Positives = 108/139 (77%)
Frame = +2
Query: 110 MPRYDERSGPTRLYVGHISSRTRTRDLEDLFSKYGRIRDVDMKQXXXXXXXXXXXXXXXX 289
MPRYD+R G TRLYVG ++ RTR+RDLE LF KYGRIR+V++K+
Sbjct: 1 MPRYDDRYGGTRLYVGRLAPRTRSRDLEYLFGKYGRIREVELKRDYAFIEFSEHRDADEA 60
Query: 290 RHYLNGRNFDGSRIAVEFAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKAG 469
R+ L+GR+ DGSRI VEFAK PRG GG REY+GRGP PGTGRC+NCG DGHWARDCKAG
Sbjct: 61 RYQLDGRDVDGSRIVVEFAKGVPRGPGGSREYMGRGPPPGTGRCFNCGMDGHWARDCKAG 120
Query: 470 DWKNKCYRCGQRGHIERDC 526
DWKNKCYRCG+RGHIER+C
Sbjct: 121 DWKNKCYRCGERGHIERNC 139
>tr|A2XZS4|A2XZS4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_18237 PE=4 SV=1
Length = 331
Score = 206 bits (525), Expect = 8e-52
Identities = 94/139 (67%), Positives = 109/139 (78%)
Frame = +2
Query: 110 MPRYDERSGPTRLYVGHISSRTRTRDLEDLFSKYGRIRDVDMKQXXXXXXXXXXXXXXXX 289
MPRYD+R G TRLYVG +SSRTR+RDLE FS+YGRIR+V++K+
Sbjct: 9 MPRYDDRYGSTRLYVGRLSSRTRSRDLEYHFSRYGRIREVELKRDYAFIEFSDPRDAEEA 68
Query: 290 RHYLNGRNFDGSRIAVEFAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKAG 469
R+ L+GR+ DGSRI VEFAK PRG GG REY+GRGP PGTGRC+NCG DGHWARDCKAG
Sbjct: 69 RYNLDGRDVDGSRILVEFAKGVPRGPGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAG 128
Query: 470 DWKNKCYRCGQRGHIERDC 526
DWKNKCYRCG+RGHIER+C
Sbjct: 129 DWKNKCYRCGERGHIERNC 147
>tr|Q5ZCD9|Q5ZCD9_ORYSJ cDNA clone:006-311-F07, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0011G08.21 PE=2 SV=1
Length = 324
Score = 206 bits (524), Expect = 1e-51
Identities = 96/146 (65%), Positives = 108/146 (73%), Gaps = 7/146 (4%)
Frame = +2
Query: 110 MPRYDERS-------GPTRLYVGHISSRTRTRDLEDLFSKYGRIRDVDMKQXXXXXXXXX 268
MPRYD+R G TRLYVG +SSRTRTRDLEDLF +YGR+R VDMK
Sbjct: 1 MPRYDDRDRYDDRYGGNTRLYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHEFAFVEFSD 60
Query: 269 XXXXXXXRHYLNGRNFDGSRIAVEFAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHW 448
R+ L+GR+FDGSR+ VEFAK PRG GG REY+GRGP PG+GRC+NCG DGHW
Sbjct: 61 ARDADEARYNLDGRDFDGSRMIVEFAKGVPRGPGGSREYMGRGPPPGSGRCFNCGIDGHW 120
Query: 449 ARDCKAGDWKNKCYRCGQRGHIERDC 526
ARDCKAGDWKN+CYRCG RGHIERDC
Sbjct: 121 ARDCKAGDWKNRCYRCGDRGHIERDC 146
>tr|A6MZ96|A6MZ96_ORYSI Splicing factor (Fragment) OS=Oryza sativa
subsp. indica PE=2 SV=1
Length = 209
Score = 206 bits (524), Expect = 1e-51
Identities = 96/146 (65%), Positives = 108/146 (73%), Gaps = 7/146 (4%)
Frame = +2
Query: 110 MPRYDERS-------GPTRLYVGHISSRTRTRDLEDLFSKYGRIRDVDMKQXXXXXXXXX 268
MPRYD+R G TRLYVG +SSRTRTRDLEDLF +YGR+R VDMK
Sbjct: 1 MPRYDDRDRYDDRYGGNTRLYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHEFAFVEFSD 60
Query: 269 XXXXXXXRHYLNGRNFDGSRIAVEFAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHW 448
R+ L+GR+FDGSR+ VEFAK PRG GG REY+GRGP PG+GRC+NCG DGHW
Sbjct: 61 ARDADEARYNLDGRDFDGSRMIVEFAKGVPRGPGGSREYMGRGPPPGSGRCFNCGIDGHW 120
Query: 449 ARDCKAGDWKNKCYRCGQRGHIERDC 526
ARDCKAGDWKN+CYRCG RGHIERDC
Sbjct: 121 ARDCKAGDWKNRCYRCGDRGHIERDC 146
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