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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948856
Clone id TST38A01NGRL0004_G21
Library
Length 683
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_G21. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
ATAGGTAGTACTTACAGTTTGCTGAAACGCTCTGAAGTGTAGCATAGAAATTCTCTGTAT
TTATGAGGTAGGCCAAGCTTGCCTTGCAATAAACTGAGGATGGCTTGTAGCAGGATTATT
TGACGCCTTTCTGCAGATGCAAGTGGACAGATAATCAAGCAGGGGTAGGAACATTTCATG
CTGATTAAGGTAGGGCTCACTCTTAAGAGTCTGTGCAAAAACCTTTTGCCAGGAGATAAG
AGAGGTCCACATGGACTCATTCTTGTCTGATGACAGGGCAGTGCCCCTATCTTACGAGAC
AGCATCATTTCAAAGTTATTTGAAGCAGTTTTCATGGTCCAGTCGTGCTCATCATGGCAT
TCACAAGCGCTCTCGTCCTGTAAGTTCGAGCTTTTATGCATATGCAGAAACAAAGGAGCA
TGTGCCTCCTCTTCTTAGAGCACATTCAGGTATGGAAGGGAGCTTACTTTCCAGCTACTT
TTTGGATGAAGTTAGAGAGGATTGCCTTTCTACTCCTGGTGATGTTTTGAGGAGCAATGG
ATTGGTTAGATCGCAGTCCTATCCCCTTGAAGGGTTTTACAATGCCCTAGAAAACTGCAT
TGTAAATATCACCAAGACTTCTAGCTTGATCAAAAGTGAGTTCTGTAAGAGTAATGATGG
TACTGGGTTGTCAAATGATTCAT
■■Homology search results ■■ -
sp_hit_id Q0CJD8
Definition sp|Q0CJD8|MDV1_ASPTN Mitochondrial division protein 1 OS=Aspergillus terreus (strain NIH 2624)
Align length 141
Score (bit) 33.9
E-value 0.83
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948856|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_G21, 5'
         (683 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0CJD8|MDV1_ASPTN Mitochondrial division protein 1 OS=Aspergi...    34   0.83 
sp|A1DDL6|MDV1_NEOFI Mitochondrial division protein 1 OS=Neosart...    33   1.8  
sp|A1WAW3|RECO_ACISJ DNA repair protein recO OS=Acidovorax sp. (...    32   3.1  
sp|Q4WVS4|MDV1_ASPFU Mitochondrial division protein 1 OS=Aspergi...    31   7.0  
sp|P22897|MRC1_HUMAN Macrophage mannose receptor 1 OS=Homo sapie...    30   9.1  
sp|Q5VSK2|MRC1L_HUMAN Macrophage mannose receptor 1-like protein...    30   9.1  
sp|Q757T0|HUL4_ASHGO Probable E3 ubiquitin-protein ligase HUL4 O...    30   9.1  

>sp|Q0CJD8|MDV1_ASPTN Mitochondrial division protein 1
           OS=Aspergillus terreus (strain NIH 2624) GN=mdv1 PE=3
           SV=2
          Length = 654

 Score = 33.9 bits (76), Expect = 0.83
 Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
 Frame = +2

Query: 242 EVHMDSFLSDDRAVPLSYETASFQSYLKQFSWSSRAHHGIHKRSRPVSSSFYAYAETKEH 421
           E + DSF+S+D A+  S+ + S   Y K  S  S     I KRS P+    +A     + 
Sbjct: 258 EANEDSFVSEDPAMDASFMSESI--YQKMSSPKSIKQRSIRKRSMPILHEHFAPGSQIKE 315

Query: 422 VPPLLRAHSGME---------GSLLSSYFLDEVREDCLSTPGDVLRSNGLVRSQSYPLEG 574
           +P    AH+ M          G+++S+   D VR   L    +V R  GL       LEG
Sbjct: 316 MP----AHNDMVTAIDFDFPFGTMVSAALDDTVRVWDL----NVGRCTGL-------LEG 360

Query: 575 FYNALENCIV---NITKTSSL 628
            +NA   C+    NI  T S+
Sbjct: 361 -HNASVRCLQIEDNIVATGSM 380


>sp|A1DDL6|MDV1_NEOFI Mitochondrial division protein 1
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=mdv1 PE=3 SV=1
          Length = 658

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
 Frame = +2

Query: 245 VHMDSFLSDDRAVPLSYETASFQSYLKQFSWSSRAHHGIHKRSRPVSSSFYA-YAETKEH 421
           V+ DSF+S+D A+  S+ + S    L   S  S     I KRS P+    +A  ++ KE 
Sbjct: 258 VNDDSFVSEDAAMDASFMSESIYQKLPSHSPRSLKQRSIRKRSMPILHEHFAPGSQIKE- 316

Query: 422 VPPLLRAHSGME---------GSLLSSYFLDEVR 496
               ++AH+ M          G+++S+   D VR
Sbjct: 317 ----MQAHTDMVTAIDFDYPFGTMVSAALDDTVR 346


>sp|A1WAW3|RECO_ACISJ DNA repair protein recO OS=Acidovorax sp.
           (strain JS42) GN=recO PE=3 SV=1
          Length = 262

 Score = 32.0 bits (71), Expect = 3.1
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = -1

Query: 449 LNVL*EEEAHAPLFLHMHKSSNLQDESACECHDEHDWTMKTASNNFEMMLSRKIGALPCH 270
           L +L  E+ HAPLF     +  ++  +  +   EH   ++    +FE++L R+IG LP  
Sbjct: 105 LRLLAREDTHAPLFDTY--AGVVRVLATVDHEGEHGDALEPVLRSFELLLLREIGLLPGL 162

Query: 269 QTRMSPCGPL 240
               S   PL
Sbjct: 163 DAETSTLAPL 172


>sp|Q4WVS4|MDV1_ASPFU Mitochondrial division protein 1
           OS=Aspergillus fumigatus GN=mdv1 PE=3 SV=2
          Length = 658

 Score = 30.8 bits (68), Expect = 7.0
 Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 13/141 (9%)
 Frame = +2

Query: 245 VHMDSFLSDDRAVPLSYETASFQSYLKQFSWSSRAHHGIHKRSRPVSSSFYA-YAETKEH 421
           V+ DS +S+D A+  S+ + S    L   S  S     I KRS P+    +A  ++ KE 
Sbjct: 258 VNDDSVVSEDAALDASFMSESIYQKLPSHSPRSLKQRSIRKRSMPILHEHFAPGSQIKE- 316

Query: 422 VPPLLRAHSGME---------GSLLSSYFLDEVREDCLSTPGDVLRSNGLVRSQSYPLEG 574
               ++AH+ M          G+++S+   D VR   L+T     R  G        LEG
Sbjct: 317 ----MQAHTDMVTAIDFDYPFGTMVSAALDDTVRVWDLNTG----RCTGF-------LEG 361

Query: 575 FYNALENCIV---NITKTSSL 628
            +NA   C+    NI  T S+
Sbjct: 362 -HNASVRCLQVEDNIVATGSM 381


>sp|P22897|MRC1_HUMAN Macrophage mannose receptor 1 OS=Homo sapiens
            GN=MRC1 PE=1 SV=1
          Length = 1456

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
 Frame = -3

Query: 279  ALSSDKNESMWTSLISWQKVFAQTLKSEPYLNQHEMFLPLLDYLSTC--------ICRKA 124
            AL+S+  ++ +T    W+  +      EP L    ++L L  Y  T         +C+++
Sbjct: 1156 ALNSNLTDNQYTWTDKWRVRYTNWAADEPKLKSACVYLDLDGYWKTAHCNESFYFLCKRS 1215

Query: 123  SNNPATSHPQFIAR 82
               PAT  PQ   R
Sbjct: 1216 DEIPATEPPQLPGR 1229


>sp|Q5VSK2|MRC1L_HUMAN Macrophage mannose receptor 1-like protein 1
            OS=Homo sapiens GN=MRC1L1 PE=2 SV=1
          Length = 1456

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
 Frame = -3

Query: 279  ALSSDKNESMWTSLISWQKVFAQTLKSEPYLNQHEMFLPLLDYLSTC--------ICRKA 124
            AL+S+  ++ +T    W+  +      EP L    ++L L  Y  T         +C+++
Sbjct: 1156 ALNSNLTDNQYTWTDKWRVRYTNWAADEPKLKSACVYLDLDGYWKTAHCNESFYFLCKRS 1215

Query: 123  SNNPATSHPQFIAR 82
               PAT  PQ   R
Sbjct: 1216 DEIPATEPPQLPGR 1229


>sp|Q757T0|HUL4_ASHGO Probable E3 ubiquitin-protein ligase HUL4
           OS=Ashbya gossypii GN=HUL4 PE=3 SV=1
          Length = 839

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
 Frame = -3

Query: 288 RGTALSSDKNE-----SMWTSLISWQKVFAQTLKSEPYLNQHEMFLPLLDYLST 142
           +GTA + DK E      M   L S    + +  K E  L +HE+F  L DY++T
Sbjct: 66  QGTAFTQDKTELFDLDDMRELLSSCNNTYRELDKDEKRLRKHEVFHLLEDYIAT 119
tr_hit_id B6QL09
Definition tr|B6QL09|B6QL09_PENMA Alkaline phosphatase Pho8 OS=Penicillium marneffei ATCC 18224
Align length 84
Score (bit) 37.4
E-value 0.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948856|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_G21, 5'
         (683 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6QL09|B6QL09_PENMA Alkaline phosphatase Pho8 OS=Penicillium ...    37   0.90 
tr|B3CDK9|B3CDK9_9BACE Putative uncharacterized protein OS=Bacte...    35   5.8  
tr|Q02EP6|Q02EP6_PSEAB Putative uncharacterized protein OS=Pseud...    34   9.9  
tr|A7AFC8|A7AFC8_9PORP Putative uncharacterized protein OS=Parab...    34   9.9  
tr|Q23FC4|Q23FC4_TETTH Putative uncharacterized protein OS=Tetra...    34   9.9  

>tr|B6QL09|B6QL09_PENMA Alkaline phosphatase Pho8 OS=Penicillium
           marneffei ATCC 18224 GN=PMAA_055800 PE=4 SV=1
          Length = 594

 Score = 37.4 bits (85), Expect = 0.90
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
 Frame = +2

Query: 230 QEIREVHMDSFLSDDRAVPLSYETASFQSYLKQFSWSSRAHHGIHKRSRPVSSSFYAYAE 409
           Q+  +  +DS L+ D  VP SY  A   S   Q  WS+  H G+             YA 
Sbjct: 467 QDATDEEVDSLLNPDSEVPPSYVFADMISRRAQVGWSTHGHSGV---------DVNIYAS 517

Query: 410 TKEHVPPLLRAHSGME-GSLLSSY 478
           + +   PL   H   E G+ L+SY
Sbjct: 518 STKDAWPLHGNHENTEVGNFLASY 541


>tr|B3CDK9|B3CDK9_9BACE Putative uncharacterized protein
           OS=Bacteroides intestinalis DSM 17393 GN=BACINT_03996
           PE=4 SV=1
          Length = 330

 Score = 34.7 bits (78), Expect = 5.8
 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
 Frame = +2

Query: 287 LSYETASFQSYLKQFSWSSRAHHGIHKRSRPVSSSFYAYAETKEHV--PPLLRAHSGMEG 460
           + Y T   ++YL  F   +++        R + SSF+A+ E ++++   P+ R H    G
Sbjct: 92  VDYSTEDIRAYLAVFQRKNKSSKVTIDNIRRIFSSFFAWLEEEDYIIKSPIRRIHKVKTG 151

Query: 461 SLLSSYFLDE----VREDCLSTPG----DVLRSNGL 544
           + +     DE    +R++C+        D+L S G+
Sbjct: 152 TQVKEILTDENIEHLRDNCIKIRDLAMIDLLASTGM 187


>tr|Q02EP6|Q02EP6_PSEAB Putative uncharacterized protein
           OS=Pseudomonas aeruginosa (strain UCBPP-PA14)
           GN=PA14_67620 PE=4 SV=1
          Length = 134

 Score = 33.9 bits (76), Expect = 9.9
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = -1

Query: 413 LFLHMHKSSNLQDESACECHDEHDWTMKTASNNFEMMLSRKIGALPCHQTRMSPCGPLLS 234
           L+L +    +L  ++A EC D HD  ++   N  E   S   G +     R   CG LL+
Sbjct: 5   LWLLLAAILSLPAQAATECRDIHDRDLRRMCNALERGDSGDCGDIDSRDMRRY-CGALLA 63

Query: 233 PGKRF 219
           PG+R+
Sbjct: 64  PGQRY 68


>tr|A7AFC8|A7AFC8_9PORP Putative uncharacterized protein
           OS=Parabacteroides merdae ATCC 43184 GN=PARMER_02118
           PE=4 SV=1
          Length = 330

 Score = 33.9 bits (76), Expect = 9.9
 Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
 Frame = +2

Query: 293 YETASFQSYLKQFSWSSRAHHGIHKRSRPVSSSFYAYAETKEHV--PPLLRAHSGMEGS- 463
           Y T   ++YL  F   +++        R + SSF+A+ E ++++   P+ R H    G+ 
Sbjct: 94  YTTEDIRAYLAVFQRKNKSSRVTIDNIRRIFSSFFAWLEEEDYIIKSPVRRIHKVKTGTQ 153

Query: 464 ---LLSSYFLDEVREDCLSTPG----DVLRSNGL 544
              +LS   ++++R+ C         D+L S G+
Sbjct: 154 VKEVLSDENIEQLRDSCTEIRDLAIIDILASTGM 187


>tr|Q23FC4|Q23FC4_TETTH Putative uncharacterized protein
            OS=Tetrahymena thermophila SB210 GN=TTHERM_00378930 PE=4
            SV=2
          Length = 1620

 Score = 33.9 bits (76), Expect = 9.9
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +2

Query: 518  GDVLRSNGLVRSQSYPLEGFYNALENCIVNITKTSSLIKSEFCKSND 658
            G+   S GL   Q YP       ++ CI NI K+ +LIK  FC+  D
Sbjct: 1291 GEKSPSQGLNDCQKYPNTPISVIIQACIQNIIKSQALIKYMFCERGD 1337