DK948877 |
Clone id |
TST38A01NGRL0004_H18 |
Library |
TST38 |
Length |
694 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_H18. 5' end sequence. |
Accession |
DK948877 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1236Contig1 |
Sequence |
CACCTCCATGGAAATCACAACAGAGTCTTTCAGAGGGGTACGCGGTATGTGGTGCACGTC TCCACAAGCCTCGTCTTCGTCTCTTGTATACGTGCGCAGCGTGCGGAAACCCGTGAAGCC TCTGGCATGTTTCTGCGTGTGCTACACATCTCCACGAGCCTCATCATCTTCATCTGCTGT GGTGAGTCGACTGCCGAAACGACAATTGTTTGACAGGGACCTGGAGCTGCGCTATTTGAA GAAATTTGTGAGAACACCTGGTGGTTTCTTGTTGCTCACAGGCCCTCCCGACTGCGGCAA GACTGAGATTTTGAAGCAACTGGCTTTTGAAGAAGCAGCAGTAACATGGATAGATTTGCG CGGTGGTGAATTTACCACAGCTGAAAAGTTTACCCATCGCGTCGGGGAAGAGCTGCGTCA GCTCTCTGTCCTTGATAATGTGCAGTTGAAGTTTGAGTGGAATATGCTGAGCATTGAGCT CAACAAGAAGGACACCGTTGAATTCCACCAAGCGATGGCGGACTATTTGACAAAGCGCAA GGCAGGTACTACTAAAGTGCCTACAGTTATCTTAGATGAGGCCAATGCTTTGCAGCGCTG GCAAAGTGATGAGACTAGTCAGAAGGCGCTGCTAAGCTTCCTAGATTTCTTTGTCAAGAT CAGCAAACAAGACCATCTTGCAAATGTAATTATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q60285 |
Definition |
sp|Q60285|Y3526_METJA Uncharacterized ATP-binding protein MJECL26 OS=Methanocaldococcus jannaschii |
Align length |
176 |
Score (bit) |
44.3 |
E-value |
0.0006 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q54B92 |
Definition |
tr|Q54B92|Q54B92_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum |
Align length |
166 |
Score (bit) |
46.6 |
E-value |
0.002 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948877|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_H18, 5' (694 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q54B92|Q54B92_DICDI Putative uncharacterized protein OS=Dicty... 47 0.002 tr|A8QEE6|A8QEE6_BRUMA ATP-dependent metalloprotease FtsH family... 43 0.022 tr|Q18NR5|Q18NR5_CAEEL Paraplegin (Paraplegin aaa protease famil... 42 0.049 tr|A0NZI4|A0NZI4_9RHOB Probable ATP-binding component of ABC tra... 41 0.064 tr|A8XPV8|A8XPV8_CAEBR Putative uncharacterized protein OS=Caeno... 41 0.064 tr|Q16V22|Q16V22_AEDAE Paraplegin OS=Aedes aegypti GN=AAEL009721... 41 0.083 tr|Q16I01|Q16I01_AEDAE Paraplegin OS=Aedes aegypti GN=AAEL013841... 41 0.083 tr|Q5F3A5|Q5F3A5_CHICK Putative uncharacterized protein OS=Gallu... 40 0.19 tr|Q4SI28|Q4SI28_TETNG Chromosome 5 SCAF14581, whole genome shot... 40 0.19 tr|B7QLH4|B7QLH4_IXOSC Paraplegin, putative OS=Ixodes scapularis... 40 0.19 tr|Q3AZU5|Q3AZU5_SYNS9 Mg chelatase-related protein OS=Synechoco... 39 0.24 tr|B2JVJ0|B2JVJ0_BURP8 ABC transporter related OS=Burkholderia p... 39 0.24 tr|Q6C3N2|Q6C3N2_YARLI YALI0E33429p OS=Yarrowia lipolytica GN=YA... 39 0.24 tr|Q7QFM1|Q7QFM1_ANOGA AGAP000560-PA (Fragment) OS=Anopheles gam... 39 0.32 tr|B0X3B3|B0X3B3_CULQU Paraplegin OS=Culex quinquefasciatus GN=C... 39 0.32 tr|Q3ILW7|Q3ILW7_NATPD Putative uncharacterized protein OS=Natro... 39 0.41 tr|Q74L11|Q74L11_LACJO ABC transporter ATPase component OS=Lacto... 38 0.54 tr|B0TEE9|B0TEE9_HELMI Type ii secretion system protein e, putat... 38 0.54 tr|A3IC89|A3IC89_9BACI ABC transporter-like protein OS=Bacillus ... 38 0.54 tr|B6NRF3|B6NRF3_BRAFL Putative uncharacterized protein (Fragmen... 38 0.54 tr|B6LBS4|B6LBS4_BRAFL Putative uncharacterized protein OS=Branc... 38 0.54 tr|B0R993|B0R993_HALS3 AAA-type ATPase, transitional ATPase homo... 38 0.54 tr|A8UKJ7|A8UKJ7_9FLAO Cell division cycle protein 48-related pr... 38 0.70 tr|Q9W4W8|Q9W4W8_DROME CG2658, isoform A OS=Drosophila melanogas... 38 0.70 tr|Q8MT03|Q8MT03_DROME CG2658, isoform B OS=Drosophila melanogas... 38 0.70 tr|Q5CRP4|Q5CRP4_CRYPV Nuclear VCP like protein with 2 AAA ATpas... 38 0.70 tr|Q5CMY1|Q5CMY1_CRYHO AAA ATPase OS=Cryptosporidium hominis GN=... 38 0.70 tr|Q55GV8|Q55GV8_DICDI Putative uncharacterized protein OS=Dicty... 38 0.70 tr|Q4Q1E9|Q4Q1E9_LEIMA Mitochondrial ATP-dependent zinc metallop... 38 0.70 tr|Q29I07|Q29I07_DROPS GA15413 OS=Drosophila pseudoobscura pseud... 38 0.70
>tr|Q54B92|Q54B92_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0219905 PE=4 SV=1 Length = 760
Score = 46.6 bits (109), Expect = 0.002 Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 5/166 (3%) Frame = +2
Query: 209 FDRDLELRYLKKFVRTPG-GFLLLTGPPDCGKTEILKQLAFEEAAVTWIDLRGGEFTTAE 385 F+R+ E+ YL F+ +P G +++ GP CGK+ I++++ +D+R T + Sbjct: 150 FNREKEVNYLNSFLSSPPLGPIVIVGPEGCGKSHIVRRVLSSRQMSILVDMRKNAVMTGD 209
Query: 386 K----FTHRVGEELRQLSVLDNVQLKFEWNMLSIELNKKDTVEFHQAMADYLTKRKAGTT 553 + F R+G L + ++ LK E +LN ++ V+ + L K K Sbjct: 210 ELLLSFLGRLGYLLPSSDPISSLFLKAEKKQ---KLNVQEIVQGLDTVFQALIKIKETFN 266
Query: 554 KVPTVILDEANALQRWQSDETSQKALLSFLDFFVKISKQDHLANVI 691 P + + AL + + FLD+ + ++ + LAN++ Sbjct: 267 ITPLITISNIEAL-------PTSENFTRFLDWCLSVT-DNKLANIV 304
>tr|A8QEE6|A8QEE6_BRUMA ATP-dependent metalloprotease FtsH family protein OS=Brugia malayi GN=Bm1_51150 PE=4 SV=1 Length = 741
Score = 42.7 bits (99), Expect = 0.022 Identities = 24/48 (50%), Positives = 31/48 (64%) Frame = +2
Query: 230 RYLKKFVRTPGGFLLLTGPPDCGKTEILKQLAFEEAAVTWIDLRGGEF 373 +Y+K R P G LLTGPP CGKT + K LA E++V +I + G EF Sbjct: 298 KYMKLGARLPKG-ALLTGPPGCGKTFLAKALA-AESSVPFISMNGTEF 343
>tr|Q18NR5|Q18NR5_CAEEL Paraplegin (Paraplegin aaa protease family protein 1) OS=Caenorhabditis elegans GN=ppgn-1 PE=2 SV=1 Length = 747
Score = 41.6 bits (96), Expect = 0.049 Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 10/61 (16%) Frame = +2
Query: 221 LELRYLKKFVRTPGGFL----------LLTGPPDCGKTEILKQLAFEEAAVTWIDLRGGE 370 +E+R +++ PG F LLTGPP CGKT + K LA E+ V +I + G E Sbjct: 295 VEIREFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALA-AESTVPFISMNGSE 353
Query: 371 F 373 F Sbjct: 354 F 354
>tr|A0NZI4|A0NZI4_9RHOB Probable ATP-binding component of ABC transporter OS=Labrenzia aggregata IAM 12614 GN=SIAM614_31361 PE=3 SV=1 Length = 357
Score = 41.2 bits (95), Expect = 0.064 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 10/101 (9%) Frame = +2
Query: 266 FLLLTGPPDCGKTEILKQLA-FEEAAVTWIDLRGGEFTTAEKFTHRVGEELRQ------L 424 F L GP CGKT +L+ +A FE+ I L+G + F V +Q + Sbjct: 35 FFTLLGPSGCGKTTLLRAIAGFEDVTEGHIRLKGKDLVDQPPFKRPVNTVFQQYALFPHM 94
Query: 425 SVLDNVQ---LKFEWNMLSIELNKKDTVEFHQAMADYLTKR 538 SV +NV L+ WN E +D +E Q ++D+ ++ Sbjct: 95 SVTENVMFGLLRKGWNRQEAERRVRDVLELVQ-LSDFAARK 134
>tr|A8XPV8|A8XPV8_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae GN=CBG16820 PE=4 SV=2 Length = 749
Score = 41.2 bits (95), Expect = 0.064 Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 10/61 (16%) Frame = +2
Query: 221 LELRYLKKFVRTPGGFL----------LLTGPPDCGKTEILKQLAFEEAAVTWIDLRGGE 370 +E+R +++ PG F LLTGPP CGKT + K LA E+ V +I + G E Sbjct: 293 VEVREFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALA-AESTVPFISMNGSE 351
Query: 371 F 373 F Sbjct: 352 F 352
>tr|Q16V22|Q16V22_AEDAE Paraplegin OS=Aedes aegypti GN=AAEL009721 PE=4 SV=1 Length = 685
Score = 40.8 bits (94), Expect = 0.083 Identities = 23/48 (47%), Positives = 30/48 (62%) Frame = +2
Query: 230 RYLKKFVRTPGGFLLLTGPPDCGKTEILKQLAFEEAAVTWIDLRGGEF 373 RY + + P G LLL GPP CGKT + K +A EAAV ++ + G EF Sbjct: 238 RYQRLGAKVPKGALLL-GPPGCGKTLLAKAVA-TEAAVPFLSMNGSEF 283
>tr|Q16I01|Q16I01_AEDAE Paraplegin OS=Aedes aegypti GN=AAEL013841 PE=4 SV=1 Length = 766
Score = 40.8 bits (94), Expect = 0.083 Identities = 23/48 (47%), Positives = 30/48 (62%) Frame = +2
Query: 230 RYLKKFVRTPGGFLLLTGPPDCGKTEILKQLAFEEAAVTWIDLRGGEF 373 RY + + P G LLL GPP CGKT + K +A EAAV ++ + G EF Sbjct: 319 RYQRLGAKVPKGALLL-GPPGCGKTLLAKAVA-TEAAVPFLSMNGSEF 364
>tr|Q5F3A5|Q5F3A5_CHICK Putative uncharacterized protein OS=Gallus gallus GN=RCJMB04_24l18 PE=2 SV=1 Length = 768
Score = 39.7 bits (91), Expect = 0.19 Identities = 23/48 (47%), Positives = 30/48 (62%) Frame = +2
Query: 230 RYLKKFVRTPGGFLLLTGPPDCGKTEILKQLAFEEAAVTWIDLRGGEF 373 RYL+ + P G LLL GPP CGKT + K +A EA V ++ + G EF Sbjct: 306 RYLQLGAKVPKGALLL-GPPGCGKTLLAKAVA-TEAQVPFLAMAGSEF 351
>tr|Q4SI28|Q4SI28_TETNG Chromosome 5 SCAF14581, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00017874001 PE=4 SV=1 Length = 826
Score = 39.7 bits (91), Expect = 0.19 Identities = 23/48 (47%), Positives = 30/48 (62%) Frame = +2
Query: 230 RYLKKFVRTPGGFLLLTGPPDCGKTEILKQLAFEEAAVTWIDLRGGEF 373 RYL+ + P G LLL GPP CGKT + K +A EA V ++ + G EF Sbjct: 245 RYLQLGAKVPKGSLLL-GPPGCGKTLLAKAVA-TEAQVPFLAMAGSEF 290
>tr|B7QLH4|B7QLH4_IXOSC Paraplegin, putative OS=Ixodes scapularis GN=IscW_ISCW014866 PE=4 SV=1 Length = 680
Score = 39.7 bits (91), Expect = 0.19 Identities = 22/48 (45%), Positives = 30/48 (62%) Frame = +2
Query: 230 RYLKKFVRTPGGFLLLTGPPDCGKTEILKQLAFEEAAVTWIDLRGGEF 373 RY + + P G LLL GPP CGKT + K +A EA+V ++ + G EF Sbjct: 238 RYTRLGAKVPKGVLLL-GPPGCGKTMLAKAVA-TEASVPFLAMAGSEF 283
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