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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948880
Clone id TST38A01NGRL0004_H21
Library
Length 384
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_H21. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GCTTGGAATTGAGGTGAAGGCGATCAATGTGCCCAATCCGCGAGTTGAAGCAGAAGAACA
CTATTACAATGCGAAGCATACAAAGTTCGGGGGAGCTTGGACTTCAGCCGCATCTTCTTT
CAGATGCACTGTTGGACTCTCTACTAAATTTTGCAGTCATTTACAAAGACCGTGTGGATA
TGGCTCAGATTATGCCTACTGTTTCATGGAAGAAAGCTGGTGTAAAACCTGTCACCGTAG
CTACAAGCTTATAGGCGAACCCTTGTAGTGTGCAACAAGAGTGTCCGAGCTTGAGAAGGT
CTTTGTTTTCAGCCAAGCATTATAGCACTGCTCATTTAATCTTAATATTCAGAGTTTTGA
GATAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q84KI6
Definition sp|Q84KI6|SQD1_SPIOL UDP-sulfoquinovose synthase, chloroplastic OS=Spinacia oleracea
Align length 49
Score (bit) 61.6
E-value 8.0e-20
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948880|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_H21, 5'
         (363 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q84KI6|SQD1_SPIOL UDP-sulfoquinovose synthase, chloroplastic ...    62   8e-20
sp|O48917|SQD1_ARATH UDP-sulfoquinovose synthase, chloroplastic ...    58   9e-19
sp|Q9VAQ7|SLU7_DROME Pre-mRNA-splicing factor Slu7 OS=Drosophila...    32   0.99 
sp|P0C297|TX23_ANDCR Toxin Acra II-3 OS=Androctonus crassicauda ...    29   8.4  

>sp|Q84KI6|SQD1_SPIOL UDP-sulfoquinovose synthase, chloroplastic
           OS=Spinacia oleracea GN=SQD1 PE=1 SV=1
          Length = 482

 Score = 61.6 bits (148), Expect(2) = 8e-20
 Identities = 30/49 (61%), Positives = 33/49 (67%)
 Frame = +3

Query: 93  ELGLQPHXXXXXXXXXXXNFAVIYKDRVDMAQIMPTVSWKKAGVKPVTV 239
           ELGL+PH           NFAV YKDRVD  QIMP+VSWKK GVKP T+
Sbjct: 432 ELGLKPHLLSDSLLDSVLNFAVQYKDRVDTKQIMPSVSWKKIGVKPQTL 480



 Score = 54.3 bits (129), Expect(2) = 8e-20
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = +2

Query: 2   LGIEVKAINVPNPRVEAEEHYYNAKHTK 85
           LG+ V+ I+VPNPRVEAEEHYYNAKHTK
Sbjct: 402 LGLNVETISVPNPRVEAEEHYYNAKHTK 429


>sp|O48917|SQD1_ARATH UDP-sulfoquinovose synthase, chloroplastic
           OS=Arabidopsis thaliana GN=SQD1 PE=1 SV=1
          Length = 477

 Score = 57.8 bits (138), Expect(2) = 9e-19
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = +3

Query: 93  ELGLQPHXXXXXXXXXXXNFAVIYKDRVDMAQIMPTVSWKKAGVKPVTVAT 245
           ELGL+PH           NFAV +KDRVD  QIMP+VSWKK GVK  ++ T
Sbjct: 427 ELGLEPHYLSDSLLDSLLNFAVQFKDRVDTKQIMPSVSWKKIGVKTKSMTT 477



 Score = 54.7 bits (130), Expect(2) = 9e-19
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = +2

Query: 2   LGIEVKAINVPNPRVEAEEHYYNAKHTK 85
           LG++VK + VPNPRVEAEEHYYNAKHTK
Sbjct: 397 LGLDVKKMTVPNPRVEAEEHYYNAKHTK 424


>sp|Q9VAQ7|SLU7_DROME Pre-mRNA-splicing factor Slu7 OS=Drosophila
           melanogaster GN=Slu7 PE=1 SV=2
          Length = 574

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
 Frame = +2

Query: 5   GIEVKAINVPNPRVEAEEHYYNAKHTK-FGGAWTSAASSFRCTVG-LSTKFCSHLQRPCG 178
           G  +K +  P  R   EE  Y   HT  +G  W +    ++C    +   +C  +Q P G
Sbjct: 375 GKVIKGVEKPKARSIYEEDVYINNHTTVWGSFWNAGRWGYKCCKSFIKNSYCVGMQEPEG 434

Query: 179 YGSDYA 196
           Y   ++
Sbjct: 435 YSEHHS 440


>sp|P0C297|TX23_ANDCR Toxin Acra II-3 OS=Androctonus crassicauda
           PE=2 SV=1
          Length = 72

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 116 SFRCTVGLSTKFCSHLQRPCGYGSDYAYCFMEESWCK 226
           S+ CT+    +FC  + +   +G  Y YC+    WC+
Sbjct: 15  SYYCTILGENEFCKKICKV--HGVSYGYCYNSGCWCE 49
tr_hit_id B8LLY1
Definition tr|B8LLY1|B8LLY1_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 53
Score (bit) 63.2
E-value 3.0e-20
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948880|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_H21, 5'
         (363 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LLY1|B8LLY1_PICSI Putative uncharacterized protein OS=Picea...    63   3e-20
tr|Q60E66|Q60E66_ORYSJ Os05g0387200 protein OS=Oryza sativa subs...    64   5e-19
tr|A3B3L9|A3B3L9_ORYSJ Putative uncharacterized protein OS=Oryza...    64   5e-19
tr|A2Y473|A2Y473_ORYSI Putative uncharacterized protein OS=Oryza...    64   5e-19
tr|A7P4L9|A7P4L9_VITVI Chromosome chr4 scaffold_6, whole genome ...    60   2e-18
tr|B6T784|B6T784_MAIZE UDP-sulfoquinovose synthase OS=Zea mays P...    62   3e-18
tr|A9S9K9|A9S9K9_PHYPA Predicted protein OS=Physcomitrella paten...    55   9e-17
tr|Q2HRI1|Q2HRI1_MEDTR UDP-sulfoquinovose synthase, chloroplast,...    56   1e-15
tr|B7FFH2|B7FFH2_MEDTR Putative uncharacterized protein OS=Medic...    56   1e-15
tr|Q763T6|Q763T6_CHLRE UDP-sulfoquinovose synthase OS=Chlamydomo...    46   2e-11
tr|Q1AWM3|Q1AWM3_RUBXD UDP-sulfoquinovose synthase OS=Rubrobacte...    54   1e-10
tr|Q2JQ56|Q2JQ56_SYNJB Putative UDP-sulfoquinovose synthase OS=S...    47   2e-10
tr|B4WMC5|B4WMC5_9SYNE NAD dependent epimerase/dehydratase famil...    47   2e-10
tr|Q2JQS0|Q2JQS0_SYNJA Putative UDP-sulfoquinovose synthase OS=S...    47   4e-10
tr|A8YA93|A8YA93_MICAE Genome sequencing data, contig C248 OS=Mi...    45   5e-10
tr|B7KEF4|B7KEF4_9CHRO NAD-dependent epimerase/dehydratase OS=Cy...    47   1e-09
tr|Q4C8Z7|Q4C8Z7_CROWT Sulfolipid biosynthesis protein OS=Crocos...    44   1e-09
tr|B1WVC9|B1WVC9_CYAA5 Sulfolipid biosynthesis protein OS=Cyanot...    44   1e-09
tr|A3IW02|A3IW02_9CHRO NAD-dependent epimerase/dehydratase OS=Cy...    44   1e-09
tr|Q8YW72|Q8YW72_ANASP Sulfolipid biosynthesis protein OS=Anabae...    43   1e-09
tr|Q3MGG7|Q3MGG7_ANAVT UDP-sulfoquinovose synthase OS=Anabaena v...    43   1e-09
tr|B5VW52|B5VW52_SPIMA NAD-dependent epimerase/dehydratase OS=Ar...    45   2e-09
tr|B7JXF4|B7JXF4_SYNP8 NAD-dependent epimerase/dehydratase OS=Sy...    47   2e-09
tr|B4BVP1|B4BVP1_9CHRO NAD-dependent epimerase/dehydratase OS=Cy...    47   2e-09
tr|B8HS08|B8HS08_9CHRO NAD-dependent epimerase/dehydratase OS=Cy...    44   3e-09
tr|B2IWK0|B2IWK0_NOSP7 NAD-dependent epimerase/dehydratase OS=No...    43   5e-09
tr|B8HUN0|B8HUN0_9CHRO NAD-dependent epimerase/dehydratase OS=Cy...    45   5e-09
tr|B0JW04|B0JW04_MICAN Sulfolipid biosynthesis protein OS=Microc...    44   5e-09
tr|A0YN05|A0YN05_9CYAN NAD-dependent epimerase/dehydratase OS=Ly...    44   8e-09
tr|B4AYW1|B4AYW1_9CHRO NAD-dependent epimerase/dehydratase OS=Cy...    43   8e-09

>tr|B8LLY1|B8LLY1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 497

 Score = 63.2 bits (152), Expect(2) = 3e-20
 Identities = 31/53 (58%), Positives = 35/53 (66%)
 Frame = +3

Query: 93  ELGLQPHXXXXXXXXXXXNFAVIYKDRVDMAQIMPTVSWKKAGVKPVTVATSL 251
           ELGLQPH           NFA+ Y DRVDMAQIMP VSWKK GVKP + A+ +
Sbjct: 443 ELGLQPHFLSDALLDSLLNFAMRYSDRVDMAQIMPAVSWKKIGVKPRSSASEV 495



 Score = 58.5 bits (140), Expect(2) = 3e-20
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = +2

Query: 2   LGIEVKAINVPNPRVEAEEHYYNAKHTK 85
           LG+EV+ INVPNPRVEAEEHYYNAKHTK
Sbjct: 413 LGLEVRTINVPNPRVEAEEHYYNAKHTK 440


>tr|Q60E66|Q60E66_ORYSJ Os05g0387200 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0073E05.10 PE=2 SV=1
          Length = 479

 Score = 63.9 bits (154), Expect(2) = 5e-19
 Identities = 31/50 (62%), Positives = 34/50 (68%)
 Frame = +3

Query: 93  ELGLQPHXXXXXXXXXXXNFAVIYKDRVDMAQIMPTVSWKKAGVKPVTVA 242
           ELGL+PH           NFAV YKDRVD AQIMP+VSWKK G KP TV+
Sbjct: 429 ELGLEPHLLSDSLLDSLLNFAVQYKDRVDTAQIMPSVSWKKMGAKPKTVS 478



 Score = 53.5 bits (127), Expect(2) = 5e-19
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = +2

Query: 2   LGIEVKAINVPNPRVEAEEHYYNAKHTK 85
           LG+EV+  +VPNPRVEAEEHYYNAKHTK
Sbjct: 399 LGLEVQTKSVPNPRVEAEEHYYNAKHTK 426


>tr|A3B3L9|A3B3L9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_017641 PE=4 SV=1
          Length = 477

 Score = 63.9 bits (154), Expect(2) = 5e-19
 Identities = 31/50 (62%), Positives = 34/50 (68%)
 Frame = +3

Query: 93  ELGLQPHXXXXXXXXXXXNFAVIYKDRVDMAQIMPTVSWKKAGVKPVTVA 242
           ELGL+PH           NFAV YKDRVD AQIMP+VSWKK G KP TV+
Sbjct: 427 ELGLEPHLLSDSLLDSLLNFAVQYKDRVDTAQIMPSVSWKKMGAKPKTVS 476



 Score = 53.5 bits (127), Expect(2) = 5e-19
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = +2

Query: 2   LGIEVKAINVPNPRVEAEEHYYNAKHTK 85
           LG+EV+  +VPNPRVEAEEHYYNAKHTK
Sbjct: 397 LGLEVQTKSVPNPRVEAEEHYYNAKHTK 424


>tr|A2Y473|A2Y473_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_19802 PE=4 SV=1
          Length = 477

 Score = 63.9 bits (154), Expect(2) = 5e-19
 Identities = 31/50 (62%), Positives = 34/50 (68%)
 Frame = +3

Query: 93  ELGLQPHXXXXXXXXXXXNFAVIYKDRVDMAQIMPTVSWKKAGVKPVTVA 242
           ELGL+PH           NFAV YKDRVD AQIMP+VSWKK G KP TV+
Sbjct: 427 ELGLEPHLLSDSLLDSLLNFAVQYKDRVDTAQIMPSVSWKKMGAKPKTVS 476



 Score = 53.5 bits (127), Expect(2) = 5e-19
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = +2

Query: 2   LGIEVKAINVPNPRVEAEEHYYNAKHTK 85
           LG+EV+  +VPNPRVEAEEHYYNAKHTK
Sbjct: 397 LGLEVQTKSVPNPRVEAEEHYYNAKHTK 424


>tr|A7P4L9|A7P4L9_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032201001
           PE=4 SV=1
          Length = 485

 Score = 60.5 bits (145), Expect(2) = 2e-18
 Identities = 29/50 (58%), Positives = 34/50 (68%)
 Frame = +3

Query: 93  ELGLQPHXXXXXXXXXXXNFAVIYKDRVDMAQIMPTVSWKKAGVKPVTVA 242
           ELGL+PH           NFAV +KDRVD  QIMP+VSW+K GVKP TV+
Sbjct: 435 ELGLKPHLLSDSLLDSLLNFAVKFKDRVDTKQIMPSVSWRKIGVKPKTVS 484



 Score = 55.1 bits (131), Expect(2) = 2e-18
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = +2

Query: 2   LGIEVKAINVPNPRVEAEEHYYNAKHTK 85
           LG++V+ I+VPNPRVEAEEHYYNAKHTK
Sbjct: 405 LGLDVQTISVPNPRVEAEEHYYNAKHTK 432


>tr|B6T784|B6T784_MAIZE UDP-sulfoquinovose synthase OS=Zea mays PE=2
           SV=1
          Length = 472

 Score = 61.6 bits (148), Expect(2) = 3e-18
 Identities = 30/50 (60%), Positives = 33/50 (66%)
 Frame = +3

Query: 93  ELGLQPHXXXXXXXXXXXNFAVIYKDRVDMAQIMPTVSWKKAGVKPVTVA 242
           ELGL PH           NFA+ YKDRVD AQIMP+VSWKK G KP TV+
Sbjct: 422 ELGLVPHLLSDSLLDSLLNFAIQYKDRVDTAQIMPSVSWKKMGAKPRTVS 471



 Score = 53.1 bits (126), Expect(2) = 3e-18
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = +2

Query: 2   LGIEVKAINVPNPRVEAEEHYYNAKHTK 85
           LG+EV+  ++PNPRVEAEEHYYNAKHTK
Sbjct: 392 LGLEVETKSIPNPRVEAEEHYYNAKHTK 419


>tr|A9S9K9|A9S9K9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_126164 PE=4 SV=1
          Length = 483

 Score = 55.5 bits (132), Expect(2) = 9e-17
 Identities = 28/49 (57%), Positives = 29/49 (59%)
 Frame = +3

Query: 93  ELGLQPHXXXXXXXXXXXNFAVIYKDRVDMAQIMPTVSWKKAGVKPVTV 239
           ELGLQPH           N AV YKDRVDM QI+P VSWKK    P TV
Sbjct: 431 ELGLQPHYLGDALLDSLLNVAVQYKDRVDMDQILPAVSWKKISAVPKTV 479



 Score = 54.3 bits (129), Expect(2) = 9e-17
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = +2

Query: 2   LGIEVKAINVPNPRVEAEEHYYNAKHTK 85
           LGIEV+  +VPNPRVEAEEHYYNAKHTK
Sbjct: 401 LGIEVQTKSVPNPRVEAEEHYYNAKHTK 428


>tr|Q2HRI1|Q2HRI1_MEDTR UDP-sulfoquinovose synthase, chloroplast,
           putative (Fragment) OS=Medicago truncatula
           GN=MtrDRAFT_AC158502g1v2 PE=4 SV=1
          Length = 196

 Score = 55.8 bits (133), Expect(2) = 1e-15
 Identities = 27/51 (52%), Positives = 32/51 (62%)
 Frame = +3

Query: 93  ELGLQPHXXXXXXXXXXXNFAVIYKDRVDMAQIMPTVSWKKAGVKPVTVAT 245
           +LGL+PH           NFAV YKDRVD  QIMP VSW+K GVK  T+ +
Sbjct: 146 DLGLKPHFLSDSLIDSLLNFAVQYKDRVDTKQIMPGVSWRKVGVKTKTLTS 196



 Score = 50.4 bits (119), Expect(2) = 1e-15
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = +2

Query: 2   LGIEVKAINVPNPRVEAEEHYYNAKHTK 85
           LG++VK I+VPNPRVE EEHYYN K+TK
Sbjct: 116 LGLDVKTISVPNPRVELEEHYYNCKNTK 143


>tr|B7FFH2|B7FFH2_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 173

 Score = 55.8 bits (133), Expect(2) = 1e-15
 Identities = 27/51 (52%), Positives = 32/51 (62%)
 Frame = +3

Query: 93  ELGLQPHXXXXXXXXXXXNFAVIYKDRVDMAQIMPTVSWKKAGVKPVTVAT 245
           +LGL+PH           NFAV YKDRVD  QIMP VSW+K GVK  T+ +
Sbjct: 123 DLGLKPHLLSDSLIDSLLNFAVQYKDRVDTKQIMPGVSWRKVGVKTKTLTS 173



 Score = 50.4 bits (119), Expect(2) = 1e-15
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = +2

Query: 2   LGIEVKAINVPNPRVEAEEHYYNAKHTK 85
           LG++VK I+VPNPRVE EEHYYN K+TK
Sbjct: 93  LGLDVKTISVPNPRVELEEHYYNCKNTK 120


>tr|Q763T6|Q763T6_CHLRE UDP-sulfoquinovose synthase OS=Chlamydomonas
           reinhardtii GN=SQD1 PE=2 SV=1
          Length = 479

 Score = 46.2 bits (108), Expect(2) = 2e-11
 Identities = 23/53 (43%), Positives = 28/53 (52%)
 Frame = +3

Query: 93  ELGLQPHXXXXXXXXXXXNFAVIYKDRVDMAQIMPTVSWKKAGVKPVTVATSL 251
           +LGLQPH            FAV YKDRV    I P V W+K GVK  T+  ++
Sbjct: 425 DLGLQPHLLADSMIDSLLEFAVTYKDRVRHELIKPAVDWRKTGVKVNTMGAAV 477



 Score = 45.8 bits (107), Expect(2) = 2e-11
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +2

Query: 2   LGIEVKAINVPNPRVEAEEHYYNAKHTK 85
           LG+ V+   VPNPRVE EEHYYNAK TK
Sbjct: 395 LGLNVEVTKVPNPRVELEEHYYNAKCTK 422