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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948883
Clone id TST38A01NGRL0004_H24
Library
Length 680
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_H24. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
TCAAAAGCGCACTCTCTAGTGTACTTGTGAGTGTGCAGAGCTAAGTTGGCTTTACACACA
TACGCGCGCGCACACACCCAAACCCGTGCATTGCCTCCCTCAGCGTCTCCCTGCCTGTGG
CCGCCATGGCTCAATCTGCCCTTCTCTCCCGCTCCTCAGCGCTCGCTTCCTCCTTCGCCA
ATTTCCAGGCAGGCTCCCGTATTGCAGCGTCGCAGGCCGGCGGCCTCTCCTTCGCTCCCC
TGCATTCCTCCAGGGTTTTCCAGTCCTCTCCCTTGAAGACAGTTGCCCTCTTTGGCACCA
AGACTCCCAAGAAGACAACTGGGTCCAAGCCTGCCCCAAAGACGAAGGGAAAGGTTGAGG
ATGGCATTTTCGGGACCTCCGGTGGAATTGGCTTCACCAAGCAAAACGAGCTCTTTGTTG
GCCGAGTCGCCATGCTTGGGTTTGCGGCCTCTATTCTAGGTGAGGCCATCACAGGAAAGG
GAACTCTTGCTCAATTCGACTTCGAGACAGGGTTGCCACTAACTGAGACAGAGCCCCTTC
TCCTCTTCTTCATTTTGTTTACATTGCTGGGTGCTATTGGAGCTCTTGGTGACCGAGGAA
AGTTTGTGGATGATCCTGCCGAGCCCACTGGGCTTGACAGGGCTGTGATTGCTCCCGGCA
AGGGTGTGAAGTCAGCTCTC
■■Homology search results ■■ -
sp_hit_id Q9SMB4
Definition sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum
Align length 109
Score (bit) 111.0
E-value 3.0e-24
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948883|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_H24, 5'
         (680 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplasti...   111   3e-24
sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplasti...   109   1e-23
sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplasti...   106   1e-22
sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplasti...   104   4e-22
sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplasti...   102   1e-21
sp|P51532|SMCA4_HUMAN Probable global transcription activator SN...    37   0.13 
sp|P37370|VRP1_YEAST Verprolin OS=Saccharomyces cerevisiae GN=VR...    36   0.17 
sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3 OS=Oryza sativa subsp....    36   0.17 
sp|Q9NRR4|RNC_HUMAN Ribonuclease 3 OS=Homo sapiens GN=RNASEN PE=...    36   0.22 
sp|O43365|HXA3_HUMAN Homeobox protein Hox-A3 OS=Homo sapiens GN=...    36   0.22 
sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophor...    35   0.28 
sp|Q9Z0G8|WIPF3_RAT WAS/WASL-interacting protein family member 3...    35   0.28 
sp|Q08DG7|HXA3_BOVIN Homeobox protein Hox-A3 OS=Bos taurus GN=HO...    35   0.28 
sp|A6NGB9|WIPF3_HUMAN WAS/WASL-interacting protein family member...    35   0.37 
sp|O14776|TCRG1_HUMAN Transcription elongation regulator 1 OS=Ho...    34   0.63 
sp|Q84L31|RD23C_ARATH Putative DNA repair protein RAD23-3 OS=Ara...    34   0.63 
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 OS=Chlamydo...    34   0.63 
sp|Q9S740|AGP19_ARATH Lysine-rich arabinogalactan protein 19 OS=...    34   0.63 
sp|P55194|3BP1_MOUSE SH3 domain-binding protein 1 OS=Mus musculu...    34   0.63 
sp|Q8TB24|RIN3_HUMAN Ras and Rab interactor 3 OS=Homo sapiens GN...    34   0.82 
sp|Q3AZB7|IF2_SYNS9 Translation initiation factor IF-2 OS=Synech...    34   0.82 
sp|P02831|HXA3_MOUSE Homeobox protein Hox-A3 OS=Mus musculus GN=...    34   0.82 
sp|Q75E67|ELOA1_ASHGO Elongin-A OS=Ashbya gossypii GN=ELA1 PE=3 ...    34   0.82 
sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE...    33   1.1  
sp|P59114|PCIF1_MOUSE Phosphorylated CTD-interacting factor 1 OS...    33   1.1  
sp|P04729|GDB1_WHEAT Gamma-gliadin B-I OS=Triticum aestivum PE=2...    33   1.1  
sp|P30599|CHS2_USTMA Chitin synthase 2 OS=Ustilago maydis GN=CHS...    33   1.1  
sp|Q7SAM0|BST1_NEUCR GPI inositol-deacylase OS=Neurospora crassa...    33   1.1  
sp|Q873A1|SEC31_NEUCR Protein transport protein sec-31 OS=Neuros...    33   1.4  
sp|Q6NZN1|PPRC1_MOUSE Peroxisome proliferator-activated receptor...    33   1.4  

>sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic
           OS=Nicotiana tabacum GN=PSBS PE=2 SV=1
          Length = 274

 Score =  111 bits (278), Expect = 3e-24
 Identities = 62/109 (56%), Positives = 67/109 (61%)
 Frame = +3

Query: 354 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 533
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 139

Query: 534 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSAL 680
                        AIGAL DRGKF+DDPA PTGLD+AVI PGKG KSAL
Sbjct: 140 PLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGLDKAVIPPGKGFKSAL 188



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 234


>sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum lycopersicum GN=PSBS PE=3 SV=1
          Length = 276

 Score =  109 bits (273), Expect = 1e-23
 Identities = 61/109 (55%), Positives = 66/109 (60%)
 Frame = +3

Query: 354 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 533
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 534 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSAL 680
                        AIGALGDRGKFVDDP  PTGL++AVI PGK  KSAL
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGKFVDDPTPPTGLEKAVIPPGKSFKSAL 190



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum sogarandinum GN=PSBS PE=2 SV=1
          Length = 276

 Score =  106 bits (265), Expect = 1e-22
 Identities = 59/109 (54%), Positives = 66/109 (60%)
 Frame = +3

Query: 354 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 533
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 534 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSAL 680
                        AIGALGDRG+F+DDPA  TGL++AVI PGK  KSAL
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGRFIDDPAPATGLEKAVIPPGKSFKSAL 190



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic
           OS=Spinacia oleracea GN=PSBS PE=1 SV=1
          Length = 274

 Score =  104 bits (260), Expect = 4e-22
 Identities = 68/157 (43%), Positives = 81/157 (51%)
 Frame = +3

Query: 210 SQAGGLSFAPLHSSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXX 389
           S    L F+PL SS    S+  KT+ALF                    VED         
Sbjct: 37  SSTSNLFFSPLPSSSSSSSTVFKTLALFKSKAKAPKKVEKPKLK----VEDGLFGTSGGI 92

Query: 390 XXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXX 569
              K+NELFVGRVAM+GFAAS+LGE ITGKG L+Q +                       
Sbjct: 93  GFTKENELFVGRVAMIGFAASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLL 152

Query: 570 XAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSAL 680
            AIGALGDRG+FVD+P   TGL++AVI PGK V+SAL
Sbjct: 153 GAIGALGDRGRFVDEPT--TGLEKAVIPPGKDVRSAL 187



 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LGFA S++GE ITGKG LAQ +
Sbjct: 200 KSNELFVGRLAQLGFAFSLIGEIITGKGALAQLN 233


>sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplastic
           OS=Arabidopsis thaliana GN=PSBS PE=1 SV=1
          Length = 265

 Score =  102 bits (255), Expect = 1e-21
 Identities = 59/109 (54%), Positives = 66/109 (60%)
 Frame = +3

Query: 354 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 533
           VED            K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +           
Sbjct: 72  VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 534 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSAL 680
                        AIGALGDRGKFVDDP  PTGL++AVI PGK V+SAL
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSAL 178



 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224


>sp|P51532|SMCA4_HUMAN Probable global transcription activator
           SNF2L4 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
          Length = 1647

 Score = 36.6 bits (83), Expect = 0.13
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +1

Query: 94  PPSASPCLWP--PWLNLPF-SPAPQRSLPPSPISRQAPVLQRRRPAASPSLP 240
           PP   P  WP  P  N    +  PQ+ +PP P  R +P      PAASP +P
Sbjct: 276 PPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMP 327


>sp|P37370|VRP1_YEAST Verprolin OS=Saccharomyces cerevisiae GN=VRP1
           PE=1 SV=2
          Length = 817

 Score = 36.2 bits (82), Expect = 0.17
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
 Frame = -2

Query: 640 LSSPVGSAGSSTNFPRSPRAPIAPSNVNKMKKRRRGSVSVSGNPVSK---SN*ARVPFPV 470
           +SS  GS+G+ ++   S  AP  P     M   + G +   G P  K   +N +  P P 
Sbjct: 62  VSSASGSSGTVSSKGPSMSAPPIPG----MGAPQLGDILAGGIPKLKHINNNASTKPSPS 117

Query: 469 MASPRIEAANPSMATRPTKSSFCLVKPIPPEVPKMPSSTFPFVFGAGLDPV 317
            ++P I  A PS+A  P  ++     P  P +P   +   P +  +   P+
Sbjct: 118 ASAPPIPGAVPSVAAPPIPNAPLSPAPAVPSIPSSSAPPIPDIPSSAAPPI 168


>sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3 OS=Oryza sativa subsp.
            japonica GN=FH3 PE=2 SV=2
          Length = 1234

 Score = 36.2 bits (82), Expect = 0.17
 Identities = 31/113 (27%), Positives = 42/113 (37%), Gaps = 7/113 (6%)
 Frame = -2

Query: 664  PLPGAITALSSPVGSAGSSTNFPRSPRAPIAPSN-VNKMKKRRRGSVSVSGNPVSKSN*A 488
            P P   ++  +P G+A SS   P  P  P+ P+N  N               P ++SN  
Sbjct: 668  PPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGP 727

Query: 487  RVPFPVMASPRIEAANPSMATRPTKSSFCLVK------PIPPEVPKMPSSTFP 347
              P P +  P   AAN      P        K      P PP+ PK P +  P
Sbjct: 728  SAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPPPPQAPKPPGTVPP 780



 Score = 30.4 bits (67), Expect = 9.1
 Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +1

Query: 82  TRALPPSASPCLWPPWLNLP-FSPAPQRSLPPSPISRQAPVLQRRRPAASPSLPCIPP 252
           T A PP   P   PP  N P FSP P    PP P     P+ Q    ++ P  P  PP
Sbjct: 540 TAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPP-----PLPQSNYASSQPPPPPPPP 592


>sp|Q9NRR4|RNC_HUMAN Ribonuclease 3 OS=Homo sapiens GN=RNASEN PE=1
           SV=2
          Length = 1374

 Score = 35.8 bits (81), Expect = 0.22
 Identities = 22/54 (40%), Positives = 24/54 (44%)
 Frame = +1

Query: 91  LPPSASPCLWPPWLNLPFSPAPQRSLPPSPISRQAPVLQRRRPAASPSLPCIPP 252
           LPP      +PP    P  P+ Q  LPP PI    P  Q R P   P  PC PP
Sbjct: 72  LPPRPDFVPFPP----PMPPSAQGPLPPCPIRPPFPNHQMRHPFPVP--PCFPP 119


>sp|O43365|HXA3_HUMAN Homeobox protein Hox-A3 OS=Homo sapiens
           GN=HOXA3 PE=2 SV=1
          Length = 443

 Score = 35.8 bits (81), Expect = 0.22
 Identities = 22/65 (33%), Positives = 31/65 (47%)
 Frame = +1

Query: 55  HTYARAHTQTRALPPSASPCLWPPWLNLPFSPAPQRSLPPSPISRQAPVLQRRRPAASPS 234
           H  + A  +T + PPS  P L  P    P  P P ++ PP+P   Q P    + PA +P+
Sbjct: 65  HELSEACLRTLSAPPSQPPSLGEP----PLHPPPPQAAPPAP---QPPQPAPQPPAPTPA 117

Query: 235 LPCIP 249
            P  P
Sbjct: 118 APPPP 122
tr_hit_id Q2LAH0
Definition tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component OS=Nicotiana benthamiana
Align length 109
Score (bit) 113.0
E-value 1.0e-23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948883|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_H24, 5'
         (680 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa compone...   113   1e-23
tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa compone...   110   1e-22
tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding prote...   110   1e-22
tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert seque...   105   3e-21
tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza...   105   3e-21
tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein ...   104   5e-21
tr|A9NK12|A9NK12_PICSI Putative uncharacterized protein OS=Picea...   100   7e-21
tr|Q1EMP1|Q1EMP1_PLAMJ Photosystem II, 22 kDa Protein OS=Plantag...   103   8e-21
tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein (At1g445...   102   2e-20
tr|Q56XH2|Q56XH2_ARATH Photosystem II chlorophyll-binding protei...   102   2e-20
tr|Q3ECX1|Q3ECX1_ARATH Uncharacterized protein At1g44575.2 OS=Ar...   102   2e-20
tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossyp...   102   2e-20
tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossyp...   102   2e-20
tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein OS=Gossyp...   101   5e-20
tr|A7NVD7|A7NVD7_VITVI Chromosome chr18 scaffold_1, whole genome...   100   1e-19
tr|Q6WFB1|Q6WFB1_MAIZE Photosystem II subunit PsbS OS=Zea mays P...    99   2e-19
tr|Q2VL34|Q2VL34_9LILI PSII subunit PsbS (Fragment) OS=Xerophyta...    99   2e-19
tr|B6TKD1|B6TKD1_MAIZE Photosystem II 22 kDa protein OS=Zea mays...    99   2e-19
tr|Q7XSS8|Q7XSS8_ORYSJ OSJNBa0039K24.28 protein (Putative unchar...    98   4e-19
tr|Q40716|Q40716_ORYSJ 22 kDa protein of photosystem II OS=Oryza...    98   4e-19
tr|Q259V3|Q259V3_ORYSA B0518A01.1 protein (H0814G11.22 protein) ...    98   4e-19
tr|Q0J8R9|Q0J8R9_ORYSJ Os04g0690800 protein OS=Oryza sativa subs...    98   4e-19
tr|A2XZ94|A2XZ94_ORYSI Putative uncharacterized protein OS=Oryza...    98   4e-19
tr|B7FJ53|B7FJ53_MEDTR Putative uncharacterized protein (Fragmen...    96   2e-18
tr|A9PIG1|A9PIG1_POPTR Putative uncharacterized protein OS=Popul...    96   3e-18
tr|A9NYQ2|A9NYQ2_PICSI Putative uncharacterized protein OS=Picea...    87   1e-15
tr|A8HPM5|A8HPM5_CHLRE Chloroplast photosystem II-associated 22 ...    58   6e-07
tr|A8HPM2|A8HPM2_CHLRE Chloroplast photosystem II-associated 22 ...    58   6e-07
tr|A4QPL3|A4QPL3_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    57   1e-06
tr|A4QPL4|A4QPL4_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    57   1e-06

>tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS1 PE=2 SV=1
          Length = 277

 Score =  113 bits (282), Expect = 1e-23
 Identities = 62/109 (56%), Positives = 67/109 (61%)
 Frame = +3

Query: 354 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 533
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 83  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 142

Query: 534 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSAL 680
                        AIGALGDRGKF+DDP  PTGLD+AVI PGKG KSAL
Sbjct: 143 PLLLFFILFNLLGAIGALGDRGKFIDDPTPPTGLDKAVIPPGKGFKSAL 191



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 204 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 237


>tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS2 PE=4 SV=1
          Length = 274

 Score =  110 bits (274), Expect = 1e-22
 Identities = 61/109 (55%), Positives = 66/109 (60%)
 Frame = +3

Query: 354 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 533
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 139

Query: 534 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSAL 680
                        AIGALGDRGKF+DDP   TGLD+AVI PGKG KSAL
Sbjct: 140 PLLLFFILFNLLGAIGALGDRGKFIDDPVPATGLDKAVIPPGKGFKSAL 188



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 234


>tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding protein
           (Fragment) OS=Solanum nigrum GN=PsbS PE=4 SV=1
          Length = 268

 Score =  110 bits (274), Expect = 1e-22
 Identities = 61/109 (55%), Positives = 67/109 (61%)
 Frame = +3

Query: 354 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 533
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 534 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSAL 680
                        AIGALGDRGKFVDDPA PTGL++AVI PG+  KSAL
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGKFVDDPAPPTGLEKAVIPPGRSFKSAL 190



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0039A07.6 PE=2 SV=1
          Length = 268

 Score =  105 bits (261), Expect = 3e-21
 Identities = 68/145 (46%), Positives = 76/145 (52%)
 Frame = +3

Query: 246 SSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXKQNELFVGR 425
           SS + ++  +KTVALF                     ED            K+NELFVGR
Sbjct: 39  SSSLGRAVSVKTVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGR 98

Query: 426 VAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAIGALGDRGKF 605
           VAMLGFAASILGEAITGKG LAQ +                        AIGALGDRG F
Sbjct: 99  VAMLGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSF 158

Query: 606 VDDPAEPTGLDRAVIAPGKGVKSAL 680
           VDD    TGLD+AVIAPGKG +SAL
Sbjct: 159 VDD-QPVTGLDKAVIAPGKGFRSAL 182



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 195 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 228


>tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04589 PE=4 SV=1
          Length = 268

 Score =  105 bits (261), Expect = 3e-21
 Identities = 68/145 (46%), Positives = 76/145 (52%)
 Frame = +3

Query: 246 SSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXKQNELFVGR 425
           SS + ++  +KTVALF                     ED            K+NELFVGR
Sbjct: 39  SSSLGRAVSVKTVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGR 98

Query: 426 VAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAIGALGDRGKF 605
           VAMLGFAASILGEAITGKG LAQ +                        AIGALGDRG F
Sbjct: 99  VAMLGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSF 158

Query: 606 VDDPAEPTGLDRAVIAPGKGVKSAL 680
           VDD    TGLD+AVIAPGKG +SAL
Sbjct: 159 VDD-QPVTGLDKAVIAPGKGFRSAL 182



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 195 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 228


>tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein
           OS=Physcomitrella patens subsp. patens GN=PSBS PE=4 SV=1
          Length = 279

 Score =  104 bits (260), Expect = 5e-21
 Identities = 62/109 (56%), Positives = 64/109 (58%)
 Frame = +3

Query: 354 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 533
           VED            K NELFVGRVAMLGFAASILGEA+TGKGTLAQFD           
Sbjct: 85  VEDGIFGTSGGIGFTKANELFVGRVAMLGFAASILGEALTGKGTLAQFDIETGIPLTETE 144

Query: 534 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSAL 680
                        AIGALGDRGKFVDD A   GLD  +I PGKGVK AL
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDD-APVAGLDSTIIKPGKGVKGAL 192



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LG A +I+GE ITGKG LAQ +
Sbjct: 205 KSNELFVGRLAQLGIAFAIIGEIITGKGALAQLN 238


>tr|A9NK12|A9NK12_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 297

 Score =  100 bits (248), Expect(2) = 7e-21
 Identities = 56/109 (51%), Positives = 64/109 (58%)
 Frame = +3

Query: 354 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 533
           VED            K NELFVGRVAM+GFAAS+LGEAITGKG L+Q +           
Sbjct: 102 VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEAITGKGILSQLNLETGIPIYEAE 161

Query: 534 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSAL 680
                        AIGALGDRGKFVDD    TGL++AVI PGKG +SA+
Sbjct: 162 PLLLFFILFTLLGAIGALGDRGKFVDDQTPTTGLEKAVIPPGKGFRSAV 210



 Score = 23.5 bits (49), Expect(2) = 7e-21
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +1

Query: 85  RALPPSASPCLWPPWLNLPFSPAPQRSLPPSPISRQAPVLQRRRPAASP 231
           R  PP+A+   W P   LP + A   +   + I+R   + + +  AA+P
Sbjct: 39  RIRPPNAAQISWSPLTELPSANAAGLN---ARIARTEALFRPKEKAAAP 84



 Score = 50.1 bits (118), Expect = 1e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 223 KSNELFVGRLAQLGIAFSIIGEIITGKGALAQLN 256


>tr|Q1EMP1|Q1EMP1_PLAMJ Photosystem II, 22 kDa Protein OS=Plantago
           major GN=psbs1 PE=2 SV=1
          Length = 262

 Score =  103 bits (258), Expect = 8e-21
 Identities = 60/109 (55%), Positives = 67/109 (61%)
 Frame = +3

Query: 354 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 533
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 72  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIFEAE 131

Query: 534 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSAL 680
                        AIGALGDRG+FVD   EPTGLD+AVIAPGKG ++AL
Sbjct: 132 PLLLFFILFNLLGAIGALGDRGRFVD---EPTGLDKAVIAPGKGFRAAL 177



 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LG A SI+GE +TGKG LAQ +
Sbjct: 189 KANELFVGRLAQLGIAFSIIGEIVTGKGALAQLN 222


>tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein
           (At1g44575/T18F15) OS=Arabidopsis thaliana PE=2 SV=1
          Length = 265

 Score =  102 bits (255), Expect = 2e-20
 Identities = 59/109 (54%), Positives = 66/109 (60%)
 Frame = +3

Query: 354 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 533
           VED            K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +           
Sbjct: 72  VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 534 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSAL 680
                        AIGALGDRGKFVDDP  PTGL++AVI PGK V+SAL
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSAL 178



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224


>tr|Q56XH2|Q56XH2_ARATH Photosystem II chlorophyll-binding protein
           PsbS OS=Arabidopsis thaliana GN=At1g44575 PE=2 SV=1
          Length = 265

 Score =  102 bits (255), Expect = 2e-20
 Identities = 59/109 (54%), Positives = 66/109 (60%)
 Frame = +3

Query: 354 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 533
           VED            K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +           
Sbjct: 72  VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 534 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSAL 680
                        AIGALGDRGKFVDDP  PTGL++AVI PGK V+SAL
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSAL 178



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +3

Query: 399 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 500
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224