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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948895
Clone id TST38A01NGRL0004_I13
Library
Length 540
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_I13. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GGAGAAAAGGAATCCCACAGAGAGCACACATGGGCGGTGTAAATTATTATCTCTATAGAC
TTAGCTCAAGCTAGTCCTAATTAGACTTTCTCATTAAGGTAAATTGAATATAAATACAAG
CCCCTTAATACAAGTTCATAATGCTCATTACTGGCAAATTGTAACATTACAATACGTCGT
GCTAGAGCGCGCTCTTCTACTTGTACAAATTAGAAGGATGTGGCTTACCAAAAGTGGGGT
TATGATCCATGAATATGTATGTATTACAGAGTGTAGCTAGGTAGTAGTAATCATCATGAG
CACAAATTTATTGCTCATGCTTATATTAAAGGCTTATAGAGTGATTGATGTAAATTTTTT
GCATCATCAATTATTAGCAGCTGTCAATCTGCGTGGAGATTGACATGATCAATGTGTGTA
TATTCATACAACCTTGTATATATTGCTAAAAGAGATTGAGATGTCNNAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6D107
Definition sp|Q6D107|AAS_ERWCT Bifunctional protein aas OS=Erwinia carotovora subsp. atroseptica
Align length 50
Score (bit) 34.3
E-value 0.28
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948895|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_I13, 5'
         (467 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6D107|AAS_ERWCT Bifunctional protein aas OS=Erwinia carotovo...    34   0.28 
sp|A1JPF0|AAS_YERE8 Bifunctional protein aas OS=Yersinia enteroc...    33   0.47 
sp|Q667F1|AAS_YERPS Bifunctional protein aas OS=Yersinia pseudot...    33   0.80 
sp|A4TLD3|AAS_YERPP Bifunctional protein aas OS=Yersinia pestis ...    33   0.80 
sp|Q74RZ6|AAS_YERPE Bifunctional protein aas OS=Yersinia pestis ...    33   0.80 
sp|Q1CAS8|AAS_YERPA Bifunctional protein aas OS=Yersinia pestis ...    33   0.80 
sp|A7FFD1|AAS_YERP3 Bifunctional protein aas OS=Yersinia pseudot...    33   0.80 
sp|A7MR36|AAS_ENTS8 Bifunctional protein aas OS=Enterobacter sak...    30   6.8  
sp|A8AP56|AAS_CITK8 Bifunctional protein aas OS=Citrobacter kose...    30   6.8  
sp|O80685|ZDHC4_ARATH Probable S-acyltransferase At2g40990 OS=Ar...    29   8.9  
sp|Q3YY21|AAS_SHISS Bifunctional protein aas OS=Shigella sonnei ...    29   8.9  
sp|Q83JV7|AAS_SHIFL Bifunctional protein aas OS=Shigella flexner...    29   8.9  
sp|Q0T128|AAS_SHIF8 Bifunctional protein aas OS=Shigella flexner...    29   8.9  
sp|Q8ZMA4|AAS_SALTY Bifunctional protein aas OS=Salmonella typhi...    29   8.9  
sp|Q8Z406|AAS_SALTI Bifunctional protein aas OS=Salmonella typhi...    29   8.9  
sp|A9N3H8|AAS_SALPB Bifunctional protein aas OS=Salmonella parat...    29   8.9  
sp|Q5PEN7|AAS_SALPA Bifunctional protein aas OS=Salmonella parat...    29   8.9  
sp|Q57KA7|AAS_SALCH Bifunctional protein aas OS=Salmonella chole...    29   8.9  
sp|A6TDH2|AAS_KLEP7 Bifunctional protein aas OS=Klebsiella pneum...    29   8.9  
sp|Q1R7H5|AAS_ECOUT Bifunctional protein aas OS=Escherichia coli...    29   8.9  
sp|P31119|AAS_ECOLI Bifunctional protein aas OS=Escherichia coli...    29   8.9  
sp|B1IU08|AAS_ECOLC Bifunctional protein aas OS=Escherichia coli...    29   8.9  
sp|Q8FEA6|AAS_ECOL6 Bifunctional protein aas OS=Escherichia coli...    29   8.9  
sp|Q0TDZ6|AAS_ECOL5 Bifunctional protein aas OS=Escherichia coli...    29   8.9  
sp|A1AF47|AAS_ECOK1 Bifunctional protein aas OS=Escherichia coli...    29   8.9  
sp|A8A3X0|AAS_ECOHS Bifunctional protein aas OS=Escherichia coli...    29   8.9  
sp|Q8X6J8|AAS_ECO57 Bifunctional protein aas OS=Escherichia coli...    29   8.9  
sp|A7ZQU2|AAS_ECO24 Bifunctional protein aas OS=Escherichia coli...    29   8.9  

>sp|Q6D107|AAS_ERWCT Bifunctional protein aas OS=Erwinia carotovora
           subsp. atroseptica GN=aas PE=3 SV=1
          Length = 738

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           AH +    L+YVV     L    R++W  K G+ I E   +TEC+ VV I
Sbjct: 473 AHPYDFARLRYVVAGAEKLSETTRQVWQDKFGIRILEGYGVTECAPVVAI 522


>sp|A1JPF0|AAS_YERE8 Bifunctional protein aas OS=Yersinia
           enterocolitica serotype O:8 / biotype 1B (strain 8081)
           GN=aas PE=3 SV=1
          Length = 718

 Score = 33.5 bits (75), Expect = 0.47
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           AH +    L+YVV     L    +++W  K G+ I E   +TEC+ VV I
Sbjct: 473 AHPYDFARLRYVVAGAEKLADSTKQIWQDKFGIRILEGYGVTECAPVVAI 522


>sp|Q667F1|AAS_YERPS Bifunctional protein aas OS=Yersinia
           pseudotuberculosis GN=aas PE=3 SV=1
          Length = 718

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           AH +    ++YVV     L    +++W  K G+ I E   +TEC+ VV I
Sbjct: 473 AHPYDFARVRYVVAGAEKLAESTKQIWQDKFGIRILEGYGVTECAPVVAI 522


>sp|A4TLD3|AAS_YERPP Bifunctional protein aas OS=Yersinia pestis
           (strain Pestoides F) GN=aas PE=3 SV=1
          Length = 718

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           AH +    ++YVV     L    +++W  K G+ I E   +TEC+ VV I
Sbjct: 473 AHPYDFARVRYVVAGAEKLAESTKQIWQDKFGIRILEGYGVTECAPVVAI 522


>sp|Q74RZ6|AAS_YERPE Bifunctional protein aas OS=Yersinia pestis
           GN=aas PE=3 SV=2
          Length = 718

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           AH +    ++YVV     L    +++W  K G+ I E   +TEC+ VV I
Sbjct: 473 AHPYDFARVRYVVAGAEKLAESTKQIWQDKFGIRILEGYGVTECAPVVAI 522


>sp|Q1CAS8|AAS_YERPA Bifunctional protein aas OS=Yersinia pestis bv.
           Antiqua (strain Antiqua) GN=aas PE=3 SV=1
          Length = 718

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           AH +    ++YVV     L    +++W  K G+ I E   +TEC+ VV I
Sbjct: 473 AHPYDFARVRYVVAGAEKLAESTKQIWQDKFGIRILEGYGVTECAPVVAI 522


>sp|A7FFD1|AAS_YERP3 Bifunctional protein aas OS=Yersinia
           pseudotuberculosis serotype O:1b (strain IP 31758)
           GN=aas PE=3 SV=1
          Length = 718

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           AH +    ++YVV     L    +++W  K G+ I E   +TEC+ VV I
Sbjct: 473 AHPYDFARVRYVVAGAEKLAESTKQIWQDKFGIRILEGYGVTECAPVVAI 522


>sp|A7MR36|AAS_ENTS8 Bifunctional protein aas OS=Enterobacter
           sakazakii (strain ATCC BAA-894) GN=aas PE=3 SV=1
          Length = 719

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           AH +    ++YVV     L    +++W  K G+ I E   +TEC+ VV I
Sbjct: 473 AHPYDFHLVRYVVAGAEKLQESTKQIWQDKFGLRILEGYGVTECAPVVSI 522


>sp|A8AP56|AAS_CITK8 Bifunctional protein aas OS=Citrobacter koseri
           (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=aas
           PE=3 SV=1
          Length = 719

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           A+ +    L+YVV     L    R++W  K G+ + E   +TEC+ VV I
Sbjct: 473 ANPYDFYRLRYVVAGAEKLQDSTRQLWQDKFGLRVLEGYGVTECAPVVSI 522


>sp|O80685|ZDHC4_ARATH Probable S-acyltransferase At2g40990
           OS=Arabidopsis thaliana GN=At2g40990 PE=2 SV=2
          Length = 386

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = -3

Query: 324 ISMSNKFVLMMITTT*LHSVIHTYS----WIITPLLVSHILLICTSRRARSSTTYCN 166
           + +  K +LM+IT   +  V+  Y     W +  L V H+ LICT++     TTY N
Sbjct: 203 LEVHGKMLLMVITNDLVFVVLILYCFVVVWFVGGLTVFHLYLICTNQ-----TTYEN 254
tr_hit_id Q4IZT1
Definition tr|Q4IZT1|Q4IZT1_AZOVI AMP-dependent synthetase and ligase:Phospholipid/glycerol acyltransferase OS=Azotobacter vinelandii DJ
Align length 50
Score (bit) 36.2
E-value 0.85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948895|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_I13, 5'
         (467 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4IZT1|Q4IZT1_AZOVI AMP-dependent synthetase and ligase:Phosp...    36   0.85 
tr|Q54KK3|Q54KK3_DICDI Putative uncharacterized protein OS=Dicty...    35   2.5  
tr|B2PTZ8|B2PTZ8_PROST Putative uncharacterized protein OS=Provi...    34   4.2  
tr|Q7SYC0|Q7SYC0_DANRE Relaxin/insulin-like family peptide recep...    33   5.5  
tr|B2VFS7|B2VFS7_ERWT9 AAS bifunctional protein OS=Erwinia tasma...    33   7.2  
tr|Q1DX05|Q1DX05_COCIM Predicted protein OS=Coccidioides immitis...    33   7.2  
tr|Q1CFA7|Q1CFA7_YERPN Aas bifunctional protein OS=Yersinia pest...    33   9.4  
tr|B4EUV3|B4EUV3_PROMH Aas bifunctional protein [includes: 2-acy...    33   9.4  
tr|B2JZ75|B2JZ75_YERPB AMP-dependent synthetase and ligase OS=Ye...    33   9.4  
tr|B1JQC1|B1JQC1_YERPY AMP-dependent synthetase and ligase OS=Ye...    33   9.4  
tr|A9R2S1|A9R2S1_YERPG 2-acylglycerophosphoethanolamine acyltran...    33   9.4  
tr|B0HVE8|B0HVE8_YERPE 2-acylglycerophosphoethanolamine acyltran...    33   9.4  
tr|B0HJ10|B0HJ10_YERPE 2-acylglycerophosphoethanolamine acyltran...    33   9.4  
tr|B0H6V0|B0H6V0_YERPE 2-acylglycerophosphoethanolamine acyltran...    33   9.4  
tr|B0GN12|B0GN12_YERPE 2-acylglycerophosphoethanolamine acyltran...    33   9.4  
tr|B0GFA2|B0GFA2_YERPE 2-acylglycerophosphoethanolamine acyltran...    33   9.4  
tr|A9ZVJ2|A9ZVJ2_YERPE 2-acylglycerophosphoethanolamine acyltran...    33   9.4  
tr|A9Z744|A9Z744_YERPE 2-acylglycerophosphoethanolamine acyltran...    33   9.4  
tr|A6BU81|A6BU81_YERPE Aas bifunctional protein OS=Yersinia pest...    33   9.4  

>tr|Q4IZT1|Q4IZT1_AZOVI AMP-dependent synthetase and
           ligase:Phospholipid/glycerol acyltransferase
           OS=Azotobacter vinelandii DJ GN=AvinDRAFT_4211 PE=3 SV=1
          Length = 710

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           AH +    L+YV+     L   +R  WL K G+ I E   +TEC+ VV +
Sbjct: 473 AHPYDFGRLRYVIAGAERLAEHVREQWLDKFGIRILEGYGVTECAPVVAV 522


>tr|Q54KK3|Q54KK3_DICDI Putative uncharacterized protein
            OS=Dictyostelium discoideum GN=DDB_0187403 PE=4 SV=1
          Length = 1054

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 19/80 (23%), Positives = 40/80 (50%)
 Frame = +2

Query: 137  HNAHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVIIMSTNLLL 316
            HNA    I++L   ++  + ++V   +   T+S   +++Y+  T    V++I + TN+ +
Sbjct: 917  HNA----IISLTGFIILMSSIIVGSTKNIYTESSWEVYDYISFTSTIPVILIFIITNIAV 972

Query: 317  MLILKAYRVIDVNFLHHQLL 376
            +  +K Y   D     H +L
Sbjct: 973  IRFVKVYHPKDFQLFRHMIL 992


>tr|B2PTZ8|B2PTZ8_PROST Putative uncharacterized protein
           OS=Providencia stuartii ATCC 25827 GN=PROSTU_00010 PE=4
           SV=1
          Length = 714

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           AH +    L+YVV     L    +++W  K G+ I E   +TEC+ +V I
Sbjct: 473 AHQYDFARLRYVVAGAEKLSDSTKKIWFDKFGIRILEGYGVTECAPIVSI 522


>tr|Q7SYC0|Q7SYC0_DANRE Relaxin/insulin-like family peptide receptor
           2 OS=Danio rerio GN=rxfp2 PE=2 SV=1
          Length = 518

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +2

Query: 101 KLNINTSPLIQVHNAHYWQIVTLQYVVLE 187
           KLNI+ +PL+Q+H  H+  +V LQ + LE
Sbjct: 309 KLNISHNPLLQIHTGHFDHLVQLQSLSLE 337


>tr|B2VFS7|B2VFS7_ERWT9 AAS bifunctional protein OS=Erwinia
           tasmaniensis (strain DSM 17950 / Et1/99) GN=aas PE=4
           SV=1
          Length = 719

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           A+ +    L+YVV     L    R +W+ K G+ I E   +TEC+ VV I
Sbjct: 473 ANPYDFARLRYVVAGAEKLQDHTRELWMEKYGIRILEGYGVTECAPVVAI 522


>tr|Q1DX05|Q1DX05_COCIM Predicted protein OS=Coccidioides immitis
           GN=CIMG_05158 PE=4 SV=1
          Length = 133

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 16/50 (32%), Positives = 30/50 (60%)
 Frame = -3

Query: 321 SMSNKFVLMMITTT*LHSVIHTYSWIITPLLVSHILLICTSRRARSSTTY 172
           S+   F+L+ ++     S+ H Y  + +PLL+SH LL+ +S R  S++ +
Sbjct: 4   SLRESFLLLSLSLLFFSSLYHHYQDLQSPLLLSHKLLLLSSLRRTSTSLF 53


>tr|Q1CFA7|Q1CFA7_YERPN Aas bifunctional protein OS=Yersinia pestis
           bv. Antiqua (strain Nepal516) GN=YPN_2996 PE=3 SV=1
          Length = 652

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           AH +    ++YVV     L    +++W  K G+ I E   +TEC+ VV I
Sbjct: 407 AHPYDFARVRYVVAGAEKLAESTKQIWQDKFGIRILEGYGVTECAPVVAI 456


>tr|B4EUV3|B4EUV3_PROMH Aas bifunctional protein [includes:
           2-acylglycerophosphoethanolamine acyltransferase and
           acyl-[acyl-carrier-protein] synthetase OS=Proteus
           mirabilis (strain HI4320) GN=aas PE=4 SV=1
          Length = 718

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           AH +    L+YVV     L    R +W  K G+ I E   +TEC+ VV I
Sbjct: 476 AHPYDFARLRYVVAGAEKLSESTRVLWQDKFGIRILEGYGVTECAPVVSI 525


>tr|B2JZ75|B2JZ75_YERPB AMP-dependent synthetase and ligase
           OS=Yersinia pseudotuberculosis serotype IB (strain
           PB1/+) GN=YPTS_3164 PE=4 SV=1
          Length = 718

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           AH +    ++YVV     L    +++W  K G+ I E   +TEC+ VV I
Sbjct: 473 AHPYDFARVRYVVAGAEKLAESTKQIWQDKFGIRILEGYGVTECAPVVAI 522


>tr|B1JQC1|B1JQC1_YERPY AMP-dependent synthetase and ligase
           OS=Yersinia pseudotuberculosis serotype O:3 (strain
           YPIII) GN=YPK_1027 PE=3 SV=1
          Length = 718

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 143 AHYWQIVTLQYVVLERALLLVQIRRMWLTKSGVMIHEYVCITECS*VVVI 292
           AH +    ++YVV     L    +++W  K G+ I E   +TEC+ VV I
Sbjct: 473 AHPYDFARVRYVVAGAEKLAESTKQIWQDKFGIRILEGYGVTECAPVVAI 522