DK948918 |
Clone id |
TST38A01NGRL0004_J13 |
Library |
TST38 |
Length |
598 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_J13. 5' end sequence. |
Accession |
DK948918 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL309Contig1 |
Sequence |
CGCGAGTCGAGTTGCCCCGTCCGTGAGACTGCGAAAATGCCTTTCCGGCGGTATGTAGAG ATTGGGCGCGTAGCCATGGTAAATTATGGCCCCAGCTATGGCAAGCTCGTCGTCATTGTG GACGTTGTGGATCAGAACCGGGCATTAGTAGATGCACCTGATATGGTTCGTGGTGCCATG AATTTCAAGCGGTTGTCTTTAACTGACATCAAGATTGATATACCAAGGATGCCAAAGAAA AAACAACTTACAGATGCTATTAATTCTGCAGATGTGCATGGCAAATGGGCTAACAGCTCT TGGGGGAGGAAACTAATTGTGCAAAAGAAGCGTGCTTCATTGAATGATTTTGACCGATTT AAAGTCATGGTGGCAAGGATCAAGAGGAGCTCTATTGTCAAGCGAGAGCTGGCAAAATTG CGCAAGGGGAAAGCTTAGGCGGATTCCATGCAATTTTCAAGCGCAAGCTGGCAAAGCTAC ACAAAGTTAGCTTTATGTCATCTATGCAGGACAAACTTTGCTATTTGCCTTTGCAACGGG AGATGTTATGAAATACGAGTGGAAATTTGTGATGGAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P55844 |
Definition |
sp|P55844|RL14_PEA Probable 60S ribosomal protein L14 OS=Pisum sativum |
Align length |
133 |
Score (bit) |
195.0 |
E-value |
1.0e-49 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948918|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_J13, 5' (561 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P55844|RL14_PEA Probable 60S ribosomal protein L14 OS=Pisum s... 195 1e-49 sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis... 194 2e-49 sp|Q9SIM4|RL141_ARATH 60S ribosomal protein L14-1 OS=Arabidopsis... 192 7e-49 sp|A1XQU3|RL14_PIG 60S ribosomal protein L14 OS=Sus scrofa GN=RP... 130 4e-30 sp|Q3T0U2|RL14_BOVIN 60S ribosomal protein L14 OS=Bos taurus GN=... 130 6e-30 sp|P50914|RL14_HUMAN 60S ribosomal protein L14 OS=Homo sapiens G... 129 1e-29 sp|Q9CR57|RL14_MOUSE 60S ribosomal protein L14 OS=Mus musculus G... 129 1e-29 sp|Q63507|RL14_RAT 60S ribosomal protein L14 OS=Rattus norvegicu... 127 4e-29 sp|Q7XYA7|RL14_GRIJA 60S ribosomal protein L14 OS=Griffithsia ja... 122 9e-28 sp|O46160|RL14_LUMRU 60S ribosomal protein L14 OS=Lumbricus rube... 122 1e-27 sp|O94238|RL14_SCHPO 60S ribosomal protein L14 OS=Schizosaccharo... 100 5e-21 sp|P38754|RL14B_YEAST 60S ribosomal protein L14-B OS=Saccharomyc... 97 7e-20 sp|P36105|RL14A_YEAST 60S ribosomal protein L14-A OS=Saccharomyc... 96 9e-20 sp|P55841|RL14_DROME 60S ribosomal protein L14 OS=Drosophila mel... 93 1e-18 sp|Q95ZE8|RL14_DROVI 60S ribosomal protein L14 OS=Drosophila vir... 90 7e-18 sp|Q54Z09|RL14_DICDI 60S ribosomal protein L14 OS=Dictyostelium ... 88 3e-17 sp|Q25278|RL14_LEIDO Probable 60S ribosomal protein L14 OS=Leish... 62 3e-09 sp|P55843|RL14_TRYCO Probable 60S ribosomal protein L14 OS=Trypa... 60 6e-09 sp|P55842|RL14_TRYBB Probable 60S ribosomal protein L14 OS=Trypa... 60 1e-08 sp|P54054|RL14E_METJA 50S ribosomal protein L14e OS=Methanocaldo... 49 2e-05 sp|Q8TX43|RL14E_METKA 50S ribosomal protein L14e OS=Methanopyrus... 48 3e-05 sp|Q8U2L5|RL14E_PYRFU 50S ribosomal protein L14e OS=Pyrococcus f... 47 5e-05 sp|A1RTL6|RL14E_PYRIL 50S ribosomal protein L14e OS=Pyrobaculum ... 47 6e-05 sp|Q8ZYB4|RL14E_PYRAE 50S ribosomal protein L14e OS=Pyrobaculum ... 47 6e-05 sp|P59937|RL14E_PYRHO 50S ribosomal protein L14e OS=Pyrococcus h... 46 1e-04 sp|A4WH36|RL14E_PYRAR 50S ribosomal protein L14e OS=Pyrobaculum ... 46 1e-04 sp|Q9UZJ5|RL14E_PYRAB 50S ribosomal protein L14e OS=Pyrococcus a... 46 1e-04 sp|Q9YDD7|RL14E_AERPE 50S ribosomal protein L14e OS=Aeropyrum pe... 46 1e-04 sp|A8ABY5|RL14E_IGNH4 50S ribosomal protein L14e OS=Ignicoccus h... 45 3e-04 sp|Q975L7|RL14E_SULTO 50S ribosomal protein L14e OS=Sulfolobus t... 44 4e-04
>sp|P55844|RL14_PEA Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1 Length = 133
Score = 195 bits (495), Expect = 1e-49 Identities = 94/133 (70%), Positives = 115/133 (86%) Frame = +1
Query: 37 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPDMVRGAMNFKRLSLTDIKI 216 MPF+R+VEIGRVA++NYG YG+LVVIVDV+DQ RALVDAPDM R +NFKRLSLTD+KI Sbjct: 1 MPFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKI 60
Query: 217 DIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSI 396 DI R+PKKK L A+ +ADV KWA SSWGRKLIV+K RA+LNDFDRFK+M+A+IKR++ Sbjct: 61 DIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAG 120
Query: 397 VKRELAKLRKGKA 435 V++ELAKL+K A Sbjct: 121 VRQELAKLKKTAA 133
>sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1 Length = 134
Score = 194 bits (494), Expect = 2e-49 Identities = 96/130 (73%), Positives = 113/130 (86%) Frame = +1
Query: 37 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPDMVRGAMNFKRLSLTDIKI 216 M F+RYVEIGRVA+VNYG +GKLVVIVDVVDQNRALVDAPDM R MNFKRLSLTDI I Sbjct: 1 MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60
Query: 217 DIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSI 396 DI R+PKKK L +A+ ADV KW SSWGRKLIVQK+RA+LNDFDRFK+M+A+IK++ + Sbjct: 61 DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120
Query: 397 VKRELAKLRK 426 V++ELAKL+K Sbjct: 121 VRQELAKLKK 130
>sp|Q9SIM4|RL141_ARATH 60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1 Length = 134
Score = 192 bits (489), Expect = 7e-49 Identities = 96/130 (73%), Positives = 112/130 (86%) Frame = +1
Query: 37 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPDMVRGAMNFKRLSLTDIKI 216 M F+R+VEIGRVA+VNYG YGKLVVIVDVVDQNRALVDAPDM R MN KRLSLTDI I Sbjct: 1 MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60
Query: 217 DIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSI 396 DI R+PKKK L +A+ ADV KW SSWGRKLIVQK+RA+LNDFDRFK+M+A+IKR+ I Sbjct: 61 DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120
Query: 397 VKRELAKLRK 426 V++ELAKL++ Sbjct: 121 VRQELAKLKR 130
>sp|A1XQU3|RL14_PIG 60S ribosomal protein L14 OS=Sus scrofa GN=RPL14 PE=2 SV=1 Length = 213
Score = 130 bits (327), Expect = 4e-30 Identities = 65/132 (49%), Positives = 91/132 (68%), Gaps = 2/132 (1%) Frame = +1
Query: 37 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDI 210 M FRR+VE+GRVA V++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD Sbjct: 1 MVFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDF 60
Query: 211 KIDIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRS 390 + P ++K + A AD++ KWA + W +K+ ++K+A + DFDR+KVM AR R+ Sbjct: 61 ILKFPHSARQKYVRKAWEKADINAKWAATRWAKKIEAREKKAKMTDFDRYKVMKARKMRN 120
Query: 391 SIVKRELAKLRK 426 ++K E+ KL+K Sbjct: 121 RLIKLEVKKLQK 132
>sp|Q3T0U2|RL14_BOVIN 60S ribosomal protein L14 OS=Bos taurus GN=RPL14 PE=2 SV=3 Length = 214
Score = 130 bits (326), Expect = 6e-30 Identities = 65/132 (49%), Positives = 91/132 (68%), Gaps = 2/132 (1%) Frame = +1
Query: 37 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDI 210 M FRR+VE+GRVA V++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD Sbjct: 1 MVFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDF 60
Query: 211 KIDIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRS 390 + P ++K + A AD++ KWA + W +K+ ++K+A + DFDR+KVM AR R+ Sbjct: 61 ILKFPHSARQKYVRKAWEKADINAKWAATRWAKKIEAREKKAKMTDFDRYKVMKARKMRN 120
Query: 391 SIVKRELAKLRK 426 ++K E+ KL+K Sbjct: 121 RLIKIEVKKLQK 132
>sp|P50914|RL14_HUMAN 60S ribosomal protein L14 OS=Homo sapiens GN=RPL14 PE=1 SV=4 Length = 215
Score = 129 bits (324), Expect = 1e-29 Identities = 65/132 (49%), Positives = 90/132 (68%), Gaps = 2/132 (1%) Frame = +1
Query: 37 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDI 210 M FRR+VE+GRVA V++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD Sbjct: 1 MVFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDF 60
Query: 211 KIDIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRS 390 + P +K + A AD++ KWA + W +K+ ++++A + DFDRFKVM A+ R+ Sbjct: 61 ILKFPHSAHQKYVRQAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRN 120
Query: 391 SIVKRELAKLRK 426 I+K E+ KL+K Sbjct: 121 RIIKNEVKKLQK 132
>sp|Q9CR57|RL14_MOUSE 60S ribosomal protein L14 OS=Mus musculus GN=Rpl14 PE=2 SV=3 Length = 217
Score = 129 bits (323), Expect = 1e-29 Identities = 64/132 (48%), Positives = 91/132 (68%), Gaps = 2/132 (1%) Frame = +1
Query: 37 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDI 210 M FRRYVE+GRVA +++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD Sbjct: 1 MVFRRYVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDF 60
Query: 211 KIDIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRS 390 + P ++K + A AD++ KWA + W +K+ ++++A + DFDRFKVM A+ R+ Sbjct: 61 ILKFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRN 120
Query: 391 SIVKRELAKLRK 426 I+K E+ KL++ Sbjct: 121 RIIKTEVKKLQR 132
>sp|Q63507|RL14_RAT 60S ribosomal protein L14 OS=Rattus norvegicus GN=Rpl14 PE=1 SV=3 Length = 214
Score = 127 bits (319), Expect = 4e-29 Identities = 63/132 (47%), Positives = 91/132 (68%), Gaps = 2/132 (1%) Frame = +1
Query: 37 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDI 210 M FRR+VE+GRVA +++GP GKLV IVDV+DQNRALVD P + R AM FK + LTD Sbjct: 1 MVFRRFVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDF 60
Query: 211 KIDIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRS 390 + P ++K + A AD++ KWA + W +K+ ++++A + DFDRFKVM A+ R+ Sbjct: 61 ILKFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRN 120
Query: 391 SIVKRELAKLRK 426 I+K E+ KL++ Sbjct: 121 RIIKTEVKKLQR 132
>sp|Q7XYA7|RL14_GRIJA 60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1 Length = 133
Score = 122 bits (307), Expect = 9e-28 Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 3/132 (2%) Frame = +1
Query: 37 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAPD--MVRGAMNFKRLSLTDI 210 M F R+VE GRVA+V+YG KLVVIVD++DQNR LVD+P + R +N KR++LT I Sbjct: 1 MTFTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSI 60
Query: 211 KID-IPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKR 387 K+D I R ++ +A V +A S WG+KL ++KRA+L+DF RFKVMVAR+K+ Sbjct: 61 KVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKK 120
Query: 388 SSIVKRELAKLR 423 S + ELAKL+ Sbjct: 121 SKAINAELAKLK 132
>sp|O46160|RL14_LUMRU 60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1 Length = 152
Score = 122 bits (306), Expect = 1e-27 Identities = 64/132 (48%), Positives = 84/132 (63%), Gaps = 2/132 (1%) Frame = +1
Query: 37 MPFRRYVEIGRVAMVNYGPSYGKLVVIVDVVDQNRALVDAP--DMVRGAMNFKRLSLTDI 210 M FRR+VEIGRVA YGP GKLV IVDV+DQNRALVD P + R +MNFK L LT++ Sbjct: 1 MSFRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNL 60
Query: 211 KIDIPRMPKKKQLTDAINSADVHGKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRS 390 K P K + A ++ KW S +K+ ++KR +L DF+RFK+M A+ R+ Sbjct: 61 KAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARN 120
Query: 391 SIVKRELAKLRK 426 ++K E KLRK Sbjct: 121 RLIKIEFGKLRK 132
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LRN0 |
Definition |
tr|B8LRN0|B8LRN0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
130 |
Score (bit) |
213.0 |
E-value |
8.0e-54 |
Report |
|