DK948938 |
Clone id |
TST38A01NGRL0004_K10 |
Library |
TST38 |
Length |
655 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_K10. 5' end sequence. |
Accession |
DK948938 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3927Contig1 |
Sequence |
CCGAAACACTGGCGGCGGGTCGCTTCTTCTTGTGGTGCAGGGATGTCAAACTCGCGGTAC TGGTCGACAATTATCTGCGGCCATGAGCATCATATTGTTTGTGGTTTTCTGGTAACCGGT GAATATGCACCCAAGTGCTTGATGTGGCCTCTTCAACTTGCAGGCCAATATTGGTCATTG ACACATTATTAACTTTTTTACAGAGTGAGGCATGTCCTCCTGGGCATGAGGGTGTGGATG CCACTGTGGCATTCCCTGGCGCGTACTGACGTGATGGTAGTGCAGCTGATGGAGGTGGAG GAACCAGAACAAATTCTTCTGCATTTGCTTCACCGTCGACCACAACATACGCAGTGGGAG AGGCTGGACAGGCAGCAGACACATGAGGGCCTTGGTCGGGGGCGCGCCTGTCGAAGTACT TGGAGCAGCATGAGTGACGGCAGGCATGGCCGCCTGTTTCCAGATGTGGAAGAGGTGCTT GGCAAGGGCGACCACGTGGCGGGAGTGAGGGTACTTGCGCAGCTTGTTGACAACCTTGCC CATGCCCGTGGTGTAGAGCAGGGCGAAGAGCTCCTTGATTTTCCAAGAGCCAATATCCTG AGTAGTAGTTGGTGATGAGAGCTGCTGGAGTTGGGCTGAGATGGCGGAGGCAGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q2KI09 |
Definition |
sp|Q2KI09|TCEA3_BOVIN Transcription elongation factor A protein 3 OS=Bos taurus |
Align length |
47 |
Score (bit) |
41.2 |
E-value |
0.005 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4HL49 |
Definition |
tr|B4HL49|B4HL49_DROSE GM25152 OS=Drosophila sechellia |
Align length |
89 |
Score (bit) |
38.9 |
E-value |
0.28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948938|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_K10, 5' (655 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4HL49|B4HL49_DROSE GM25152 OS=Drosophila sechellia GN=GM2515... 39 0.28 tr|B4PEV8|B4PEV8_DROYA GE20844 OS=Drosophila yakuba GN=GE20844 P... 39 0.37 tr|Q5FBG4|Q5FBG4_9HYPO Putative uncharacterized protein (Fragmen... 38 0.48 tr|Q8T0B3|Q8T0B3_DROME LD13887p OS=Drosophila melanogaster GN=CG... 37 1.1 tr|Q0E8G5|Q0E8G5_DROME CG32043, isoform A OS=Drosophila melanoga... 37 1.1 tr|Q29P72|Q29P72_DROPS GA17632 OS=Drosophila pseudoobscura pseud... 37 1.4 tr|B4GK82|B4GK82_DROPE GL25727 OS=Drosophila persimilis GN=GL257... 37 1.4 tr|Q9W3I4|Q9W3I4_DROME CG2278 OS=Drosophila melanogaster GN=CG22... 36 2.4 tr|Q5C3N7|Q5C3N7_SCHJA SJCHGC09202 protein (Fragment) OS=Schisto... 36 2.4 tr|B4IL27|B4IL27_DROSE GM12971 OS=Drosophila sechellia GN=GM1297... 36 2.4 tr|A4HLJ3|A4HLJ3_LEIBR Putative uncharacterized protein OS=Leish... 36 2.4 tr|A4HLJ1|A4HLJ1_LEIBR Putative uncharacterized protein OS=Leish... 36 2.4 tr|B4QN72|B4QN72_DROSI GD14186 OS=Drosophila simulans GN=GD14186... 35 3.1 tr|B4KLB6|B4KLB6_DROMO GI17330 OS=Drosophila mojavensis GN=GI173... 35 3.1 tr|B4G9Q0|B4G9Q0_DROPE GL19523 OS=Drosophila persimilis GN=GL195... 35 3.1 tr|B3NB52|B3NB52_DROER GG23207 OS=Drosophila erecta GN=GG23207 P... 35 3.1 tr|Q29LE7|Q29LE7_DROPS GA16375 OS=Drosophila pseudoobscura pseud... 35 4.0 tr|B4P0Y3|B4P0Y3_DROYA GE19061 OS=Drosophila yakuba GN=GE19061 P... 35 4.0 tr|A2AW46|A2AW46_MOUSE Transcription elongation factor A (SII), ... 35 5.3 tr|Q9NHP6|Q9NHP6_DROVI Transcription elongation factor TFIIS OS=... 35 5.3 tr|B4Q5Z6|B4Q5Z6_DROSI GD21971 OS=Drosophila simulans GN=GD21971... 35 5.3 tr|B4HXM1|B4HXM1_DROSE GM14545 OS=Drosophila sechellia GN=GM1454... 35 5.3 tr|B3S438|B3S438_TRIAD Putative uncharacterized protein OS=Trich... 35 5.3 tr|A4RKL3|A4RKL3_MAGGR Putative uncharacterized protein OS=Magna... 35 5.3 tr|Q09DT6|Q09DT6_STIAU Amidohydrolase family protein OS=Stigmate... 34 6.9 tr|Q29EP8|Q29EP8_DROPS GA20934 OS=Drosophila pseudoobscura pseud... 34 6.9 tr|B4N733|B4N733_DROWI GK23609 OS=Drosophila willistoni GN=GK236... 34 6.9 tr|B4H2B8|B4H2B8_DROPE GL18045 OS=Drosophila persimilis GN=GL180... 34 6.9 tr|B3MMA2|B3MMA2_DROAN GF15561 OS=Drosophila ananassae GN=GF1556... 34 6.9 tr|B6N6U0|B6N6U0_BRAFL Putative uncharacterized protein OS=Branc... 34 8.9
>tr|B4HL49|B4HL49_DROSE GM25152 OS=Drosophila sechellia GN=GM25152 PE=4 SV=1 Length = 773
Score = 38.9 bits (89), Expect = 0.28 Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 4/89 (4%) Frame = -2
Query: 453 AAMPAVTHAAPSTSTGAPPTKALMCLLPVQP-LPLRMLWSTVKQMQKNLFWFLHLHQLHY 277 A A T A S A P +A+ P P +P + T Q+ HL Q H Sbjct: 566 ATATASTPVATSVLGAATPAQAVPRTRPATPTMPAGAVAVTPTTPQQQQ----HLQQQHQ 621
Query: 276 HHVSTRQGM---PQWHPHPHAQEDMPHSV 199 +Q M P HPHPHAQ PH++ Sbjct: 622 QQQQQQQHMLQHPHTHPHPHAQHSHPHTL 650
>tr|B4PEV8|B4PEV8_DROYA GE20844 OS=Drosophila yakuba GN=GE20844 PE=4 SV=1 Length = 775
Score = 38.5 bits (88), Expect = 0.37 Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 4/89 (4%) Frame = -2
Query: 453 AAMPAVTHAAPSTSTGAPPTKALMCLLPVQP-LPLRMLW---STVKQMQKNLFWFLHLHQ 286 AA T AA S A P + + PV P +P + +T +Q Q+ H Q Sbjct: 566 AAAVTATPAATSVLGAATPAQTVQRTRPVTPTMPAGTVAGTPTTPQQQQQQHLQQQHQQQ 625
Query: 285 LHYHHVSTRQGMPQWHPHPHAQEDMPHSV 199 H+ P HPHPHAQ PH++ Sbjct: 626 QQQQHMLQH---PHTHPHPHAQHSHPHTL 651
>tr|Q5FBG4|Q5FBG4_9HYPO Putative uncharacterized protein (Fragment) OS=Fusarium sp. IFO 7772 PE=4 SV=1 Length = 232
Score = 38.1 bits (87), Expect = 0.48 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = -2
Query: 423 PSTSTGAPPTKALMCLLPVQPLPLRMLWSTVKQMQKNLFWFLHLHQLHY-HHVSTRQGMP 247 P+T TG PP + +LP QP+P + + + H Q H + +T P Sbjct: 19 PATPTGYPPAAIAVPVLPTQPVPAARVSQPIGSANVQQHFTPHAVQSHTGYEPATPAAQP 78
Query: 246 QWHPHP 229 Q+H HP Sbjct: 79 QYHQHP 84
>tr|Q8T0B3|Q8T0B3_DROME LD13887p OS=Drosophila melanogaster GN=CG18632 PE=2 SV=1 Length = 479
Score = 37.0 bits (84), Expect = 1.1 Identities = 30/109 (27%), Positives = 37/109 (33%), Gaps = 25/109 (22%) Frame = -2
Query: 450 AMPAVTHAAPSTSTGAPPTKALMCLL----------------PVQPLPLRMLWSTVKQMQ 319 A P + AA S +T P T +L P P T Q Q Sbjct: 250 ATPKLAAAAASAATATPATPVATSMLGAATPAQAVPRTRPATPTMPAGAVAGTPTTPQHQ 309
Query: 318 KNLFWFLHLHQLHYHHVSTRQGM---------PQWHPHPHAQEDMPHSV 199 + HLHQ H +Q P HPHPHAQ PH++ Sbjct: 310 QQQ----HLHQQHQQQQQQQQQQQQQQHMLQHPHTHPHPHAQHSHPHTL 354
>tr|Q0E8G5|Q0E8G5_DROME CG32043, isoform A OS=Drosophila melanogaster GN=CG32043 PE=4 SV=1 Length = 783
Score = 37.0 bits (84), Expect = 1.1 Identities = 30/109 (27%), Positives = 37/109 (33%), Gaps = 25/109 (22%) Frame = -2
Query: 450 AMPAVTHAAPSTSTGAPPTKALMCLL----------------PVQPLPLRMLWSTVKQMQ 319 A P + AA S +T P T +L P P T Q Q Sbjct: 554 ATPKLAAAAASAATATPATPVATSMLGAATPAQAVPRTRPATPTMPAGAVAGTPTTPQHQ 613
Query: 318 KNLFWFLHLHQLHYHHVSTRQGM---------PQWHPHPHAQEDMPHSV 199 + HLHQ H +Q P HPHPHAQ PH++ Sbjct: 614 QQQ----HLHQQHQQQQQQQQQQQQQQHMLQHPHTHPHPHAQHSHPHTL 658
>tr|Q29P72|Q29P72_DROPS GA17632 OS=Drosophila pseudoobscura pseudoobscura GN=GA17632 PE=4 SV=1 Length = 313
Score = 36.6 bits (83), Expect = 1.4 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = -2
Query: 561 LLYTTGMGKVVNKLRKYPHSRHVVALAKHLFHIWKQ-AAMPAVTHAAPSTSTG 406 +L T +G VN+LRK V+ALAK L WK+ A PA T ST+ G Sbjct: 45 ILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFLASPAPTTPNNSTAAG 97
>tr|B4GK82|B4GK82_DROPE GL25727 OS=Drosophila persimilis GN=GL25727 PE=4 SV=1 Length = 313
Score = 36.6 bits (83), Expect = 1.4 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = -2
Query: 561 LLYTTGMGKVVNKLRKYPHSRHVVALAKHLFHIWKQ-AAMPAVTHAAPSTSTG 406 +L T +G VN+LRK V+ALAK L WK+ A PA T ST+ G Sbjct: 45 ILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFLASPAPTTPNNSTAAG 97
>tr|Q9W3I4|Q9W3I4_DROME CG2278 OS=Drosophila melanogaster GN=CG2278 PE=1 SV=1 Length = 600
Score = 35.8 bits (81), Expect = 2.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2
Query: 291 HQLHYHHVSTRQGMPQWHPHPHAQEDMPHSV 199 HQLH+HH +Q H HPH + +P +V Sbjct: 172 HQLHHHHQQQQQQQQHHHHHPHQPQPVPSAV 202
>tr|Q5C3N7|Q5C3N7_SCHJA SJCHGC09202 protein (Fragment) OS=Schistosoma japonicum PE=2 SV=2 Length = 229
Score = 35.8 bits (81), Expect = 2.4 Identities = 18/57 (31%), Positives = 28/57 (49%) Frame = -2
Query: 579 IKELFALLYTTGMGKVVNKLRKYPHSRHVVALAKHLFHIWKQAAMPAVTHAAPSTST 409 I+ +L TG+G ++NK+RK V L K++ WK+ AP T+T Sbjct: 35 IEMTLEILTKTGVGIIINKIRKESEDPEVATLGKNMIKQWKKLVPDKSDVPAPCTNT 91
>tr|B4IL27|B4IL27_DROSE GM12971 OS=Drosophila sechellia GN=GM12971 PE=4 SV=1 Length = 603
Score = 35.8 bits (81), Expect = 2.4 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 8/101 (7%) Frame = -2
Query: 495 VVALAKHLFHIWKQAAMPAVTHAAPSTSTGAPPTKALMCLLPVQ-PLPLRMLWSTVKQMQ 319 V+ L +H Q M A AA +TS APPT L PV +WS + +M Sbjct: 488 VLDLEEHHHLRLLQTQMFAAAAAAAATSQ-APPTAFLPAGSPVDLAKDSPPMWSLLSEMY 546
Query: 318 KNLFW-------FLHLHQLHYHHVSTRQGMPQWHPHPHAQE 217 +++ H HQ +HH+ G H H H Q+ Sbjct: 547 RSMLQEQHHHLTLSHHHQEQHHHLGHHMGHHHHHHHQHHQQ 587
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