DK948951 |
Clone id |
TST38A01NGRL0004_K23 |
Library |
TST38 |
Length |
657 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_K23. 5' end sequence. |
Accession |
DK948951 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL43Contig1 |
Sequence |
CAGGCTGGACATAAAAGCATACTGCCTGATGCTTCTAATCATTGGGGACTTTACCCAGCA ACTGCTAATGGTGCATTTTATGGATCTACGATGGGGTATGACTGCTATGTGCCACAGCAA TGGCACTCTTCTATGAGGGGTTTTCAGCCAATACCTTCTCCACAGAACATTGGTGCGCAT GGGAATGGTGCCCCACCGCTGCCTGGTAGTGGACCTGGACGCTTTCAGAACTTTCCAAGA GTGCATTCTGCTCCTAACATGTCTGGAAGAGTTTTAAAAGGGTGTTCAGTTAAAGGTGGC TCAACAGGGAGCAACTGGAGGGCTAAGGATGTCTCAAAAGGACAGAATAAGGGTGATGGG CCTGTCAACAGTGCTCTTCCAGAGGCCTGTGGTGACTCTTTTCTAAAACCATCAGTAATA GAATCCAAAGTGCTCCCTGTTCAGGAAGGTGGAGAGGTACGTAATCACTCATCGCTCATT CCAGAGCAGCTATGCAGCTCAGTCAACAGGAGTGATTACAACAAGGATGACTTTCAAGTA TCGTATGAGGCAGCCAAGTTTTTCATAATTAAGTCGTATAGCGAAGATGATGTGCACAAA AGTATTAAATACAGTGTGTGGTCAAGTACGCCAAATGGAAACAAACGATTGGACGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q4R5D9 |
Definition |
sp|Q4R5D9|YTHD2_MACFA YTH domain family protein 2 OS=Macaca fascicularis |
Align length |
167 |
Score (bit) |
69.7 |
E-value |
1.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q56XH8 |
Definition |
tr|Q56XH8|Q56XH8_ARATH Putative uncharacterized protein At1g09810 OS=Arabidopsis thaliana |
Align length |
166 |
Score (bit) |
90.1 |
E-value |
1.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948951|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_K23, 5' (657 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q56XH8|Q56XH8_ARATH Putative uncharacterized protein At1g0981... 90 1e-16 tr|A1L4X2|A1L4X2_ARATH At1g09810 OS=Arabidopsis thaliana PE=2 SV=1 90 1e-16 tr|O04503|O04503_ARATH F21M12.20 protein OS=Arabidopsis thaliana... 89 2e-16 tr|A2Q5N8|A2Q5N8_MEDTR YT521-B-like protein OS=Medicago truncatu... 89 2e-16 tr|Q9ZVU7|Q9ZVU7_ARATH T5A14.10 protein OS=Arabidopsis thaliana ... 87 7e-16 tr|Q94A30|Q94A30_ARATH At1g55500/T5A14_10 OS=Arabidopsis thalian... 87 7e-16 tr|B4FF31|B4FF31_MAIZE Putative uncharacterized protein OS=Zea m... 87 7e-16 tr|Q9FNR2|Q9FNR2_ARATH Similarity to unknown protein (Putative u... 86 2e-15 tr|Q93ZP1|Q93ZP1_ARATH AT5g61020/maf19_20 OS=Arabidopsis thalian... 86 2e-15 tr|A7NVV9|A7NVV9_VITVI Chromosome chr5 scaffold_2, whole genome ... 86 2e-15 tr|A5AJP6|A5AJP6_VITVI Putative uncharacterized protein OS=Vitis... 86 2e-15 tr|A5BWE9|A5BWE9_VITVI Putative uncharacterized protein OS=Vitis... 86 3e-15 tr|Q9LJE5|Q9LJE5_ARATH Gb|AAD10646.1 (AT3g13460/MRP15_10) OS=Ara... 85 5e-15 tr|Q8H0S7|Q8H0S7_ARATH Putative uncharacterized protein At3g1346... 85 5e-15 tr|Q3MK93|Q3MK93_ARATH Putative uncharacterized protein OS=Arabi... 85 5e-15 tr|Q3EB70|Q3EB70_ARATH Uncharacterized protein At3g13460.2 OS=Ar... 85 5e-15 tr|Q2V3W3|Q2V3W3_ARATH Uncharacterized protein At3g13460.3 OS=Ar... 85 5e-15 tr|Q2V3W2|Q2V3W2_ARATH Uncharacterized protein At3g13460.4 OS=Ar... 85 5e-15 tr|Q8H8C1|Q8H8C1_ORYSJ Putative RNA-binding protein (Putative un... 84 6e-15 tr|Q10RI5|Q10RI5_ORYSJ YT521-B-like family protein, expressed OS... 84 6e-15 tr|Q10RI4|Q10RI4_ORYSJ Os03g0158500 protein OS=Oryza sativa subs... 84 6e-15 tr|Q10RI3|Q10RI3_ORYSJ YT521-B-like family protein, expressed OS... 84 6e-15 tr|Q10RI2|Q10RI2_ORYSJ YT521-B-like family protein, expressed OS... 84 6e-15 tr|B8ANU7|B8ANU7_ORYSI Putative uncharacterized protein OS=Oryza... 84 6e-15 tr|B4FF64|B4FF64_MAIZE Putative uncharacterized protein OS=Zea m... 84 6e-15 tr|A7P0B6|A7P0B6_VITVI Chromosome chr6 scaffold_3, whole genome ... 84 6e-15 tr|B4FBI4|B4FBI4_MAIZE Putative uncharacterized protein OS=Zea m... 84 8e-15 tr|A9PJU2|A9PJU2_POPJC Putative uncharacterized protein OS=Popul... 84 8e-15 tr|A7QP53|A7QP53_VITVI Chromosome chr1 scaffold_136, whole genom... 84 8e-15 tr|A7QMM3|A7QMM3_VITVI Chromosome chr19 scaffold_126, whole geno... 83 1e-14
>tr|Q56XH8|Q56XH8_ARATH Putative uncharacterized protein At1g09810 OS=Arabidopsis thaliana GN=At1g09810 PE=2 SV=1 Length = 470
Score = 90.1 bits (222), Expect = 1e-16 Identities = 62/166 (37%), Positives = 79/166 (47%), Gaps = 1/166 (0%) Frame = +1
Query: 160 PQNIGAHGNGAPPLPGSGPGRFQNFPRVH-SAPNMSGRVLKGCSVKGGSTGSNWRAKDVS 336 P N AH P G+F F S SG + G S W +D + Sbjct: 117 PPNTQAHAFRPPFKGKEAAGQFLTFSNQKTSCVPYSGYI------NGNSNNGFWDQRDHN 170
Query: 337 KGQNKGDGPVNSALPEACGDSFLKPSVIESKVLPVQEGGEVRNHSSLIPEQLCSSVNRSD 516 K + +G + + CG +K P E ++ ++S ++ R Sbjct: 171 KKPER-NGESDYLVELKCGPR------ANAKTRPPSESSPLKQNNSF-----ALALRREM 218
Query: 517 YNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLD 654 YN DFQ YE AKFF+IKSYSEDDVHKSIKYSVWSST NGNK+LD Sbjct: 219 YNLPDFQTDYEDAKFFVIKSYSEDDVHKSIKYSVWSSTINGNKKLD 264
>tr|A1L4X2|A1L4X2_ARATH At1g09810 OS=Arabidopsis thaliana PE=2 SV=1 Length = 428
Score = 90.1 bits (222), Expect = 1e-16 Identities = 62/166 (37%), Positives = 79/166 (47%), Gaps = 1/166 (0%) Frame = +1
Query: 160 PQNIGAHGNGAPPLPGSGPGRFQNFPRVH-SAPNMSGRVLKGCSVKGGSTGSNWRAKDVS 336 P N AH P G+F F S SG + G S W +D + Sbjct: 75 PPNTQAHAFRPPFKGKEAAGQFLTFSNQKTSCVPYSGYI------NGNSNNGFWDQRDHN 128
Query: 337 KGQNKGDGPVNSALPEACGDSFLKPSVIESKVLPVQEGGEVRNHSSLIPEQLCSSVNRSD 516 K + +G + + CG +K P E ++ ++S ++ R Sbjct: 129 KKPER-NGESDYLVELKCGPR------ANAKTRPPSESSPLKQNNSF-----ALALRREM 176
Query: 517 YNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLD 654 YN DFQ YE AKFF+IKSYSEDDVHKSIKYSVWSST NGNK+LD Sbjct: 177 YNLPDFQTDYEDAKFFVIKSYSEDDVHKSIKYSVWSSTINGNKKLD 222
>tr|O04503|O04503_ARATH F21M12.20 protein OS=Arabidopsis thaliana GN=F21M12.20 PE=4 SV=1 Length = 425
Score = 89.4 bits (220), Expect = 2e-16 Identities = 51/122 (41%), Positives = 67/122 (54%) Frame = +1
Query: 289 VKGGSTGSNWRAKDVSKGQNKGDGPVNSALPEACGDSFLKPSVIESKVLPVQEGGEVRNH 468 + G S W +D +K + +G + + CG +K P E ++ + Sbjct: 94 INGNSNNGFWDQRDHNKKPER-NGESDYLVELKCGPR------ANAKTRPPSESSPLKQN 146
Query: 469 SSLIPEQLCSSVNRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKR 648 +S ++ R YN DFQ YE AKFF+IKSYSEDDVHKSIKYSVWSST NGNK+ Sbjct: 147 NSF-----ALALRREMYNLPDFQTDYEDAKFFVIKSYSEDDVHKSIKYSVWSSTINGNKK 201
Query: 649 LD 654 LD Sbjct: 202 LD 203
>tr|A2Q5N8|A2Q5N8_MEDTR YT521-B-like protein OS=Medicago truncatula GN=MtrDRAFT_AC167711g26v2 PE=4 SV=1 Length = 662
Score = 89.4 bits (220), Expect = 2e-16 Identities = 71/191 (37%), Positives = 95/191 (49%), Gaps = 16/191 (8%) Frame = +1
Query: 130 SMRGFQPIPSPQNIGA--HGNGAPPLPGSGPGRFQN---FPRVHSAPNMSGRVLKGCSVK 294 + R Q +P N+ H +G LPG G + + F + S+ + R G S Sbjct: 285 NQRHSQSLPQFMNLNGSRHPSGMELLPGFMNGMYPSNNLFSQYGSSFRANSRY--GSSAY 342
Query: 295 GGSTGS---NWRAKD----VSKGQNKGDG--PVNSALPEACGDSFLKPSVIESKVLPVQE 447 G TGS +RA + + GDG +N P A S K V + + Sbjct: 343 GSRTGSFDNKYRATGNGYVANDSRRNGDGFSELNKG-PRAAKSSDNKSVKSPEPVTLLLK 401
Query: 448 GGE--VRNHSSLIPEQLCSSVNRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVW 621 G V++ ++P L N+ YN +D +Y AKFFIIKSYSEDDVHKSIKYSVW Sbjct: 402 GQNLPVKSDDEVVPLVL----NKEQYNGEDLSENYSDAKFFIIKSYSEDDVHKSIKYSVW 457
Query: 622 SSTPNGNKRLD 654 +STPNGNK+LD Sbjct: 458 ASTPNGNKKLD 468
>tr|Q9ZVU7|Q9ZVU7_ARATH T5A14.10 protein OS=Arabidopsis thaliana GN=T5A14.10 PE=4 SV=1 Length = 580
Score = 87.4 bits (215), Expect = 7e-16 Identities = 39/54 (72%), Positives = 46/54 (85%) Frame = +1
Query: 493 CSSVNRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLD 654 C +R + N+DDF V Y+ AKFFIIKSYSEDDVHKSIKY+VW+STPNGNK+LD Sbjct: 381 CVLPDREECNRDDFPVEYKDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLD 434
>tr|Q94A30|Q94A30_ARATH At1g55500/T5A14_10 OS=Arabidopsis thaliana GN=At1g55500 PE=2 SV=1 Length = 549
Score = 87.4 bits (215), Expect = 7e-16 Identities = 39/54 (72%), Positives = 46/54 (85%) Frame = +1
Query: 493 CSSVNRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLD 654 C +R + N+DDF V Y+ AKFFIIKSYSEDDVHKSIKY+VW+STPNGNK+LD Sbjct: 338 CVLPDREECNRDDFPVEYKDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLD 391
>tr|B4FF31|B4FF31_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 338
Score = 87.4 bits (215), Expect = 7e-16 Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 1/139 (0%) Frame = +1
Query: 241 VHSAPNMSGRVLKGCSVKGGSTGSNWRAKDVSKGQNKGDGPVNSALPEACGDSFLKPSVI 420 +HS V + + +G +W + + K ++K +G +S E K S+ Sbjct: 1 MHSNNQAKSSVYQSKGINLKESGRSWHSSEKLKARSKLNGHGDSESNENNHTDNSKYSLS 60
Query: 421 -ESKVLPVQEGGEVRNHSSLIPEQLCSSVNRSDYNKDDFQVSYEAAKFFIIKSYSEDDVH 597 +S V+ + G+ ++ IP + + ++ YN DF YE A FF+IKSYSEDD+H Sbjct: 61 SQSDVVGLSSVGDA---NASIPSPVV--IRKTAYNLSDFVTKYEQALFFVIKSYSEDDIH 115
Query: 598 KSIKYSVWSSTPNGNKRLD 654 KSIKY+VW+STPNGNKRLD Sbjct: 116 KSIKYNVWASTPNGNKRLD 134
>tr|Q9FNR2|Q9FNR2_ARATH Similarity to unknown protein (Putative uncharacterized protein At5g61020) OS=Arabidopsis thaliana GN=At5g61020 PE=2 SV=1 Length = 493
Score = 85.9 bits (211), Expect = 2e-15 Identities = 43/77 (55%), Positives = 55/77 (71%) Frame = +1
Query: 424 SKVLPVQEGGEVRNHSSLIPEQLCSSVNRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKS 603 SKV+ V + + + E + S ++ DYNK DF +Y AKF++IKSYSEDD+HKS Sbjct: 217 SKVMAVSLKEQRVTETEKLSEDV-SLLDPKDYNKIDFPETYTEAKFYVIKSYSEDDIHKS 275
Query: 604 IKYSVWSSTPNGNKRLD 654 IKYSVWSSTPNGNK+LD Sbjct: 276 IKYSVWSSTPNGNKKLD 292
>tr|Q93ZP1|Q93ZP1_ARATH AT5g61020/maf19_20 OS=Arabidopsis thaliana PE=2 SV=1 Length = 495
Score = 85.9 bits (211), Expect = 2e-15 Identities = 43/77 (55%), Positives = 55/77 (71%) Frame = +1
Query: 424 SKVLPVQEGGEVRNHSSLIPEQLCSSVNRSDYNKDDFQVSYEAAKFFIIKSYSEDDVHKS 603 SKV+ V + + + E + S ++ DYNK DF +Y AKF++IKSYSEDD+HKS Sbjct: 219 SKVMAVSLKEQRVTETEKLSEDV-SLLDPKDYNKIDFPETYTEAKFYVIKSYSEDDIHKS 277
Query: 604 IKYSVWSSTPNGNKRLD 654 IKYSVWSSTPNGNK+LD Sbjct: 278 IKYSVWSSTPNGNKKLD 294
>tr|A7NVV9|A7NVV9_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019682001 PE=4 SV=1 Length = 416
Score = 85.9 bits (211), Expect = 2e-15 Identities = 38/46 (82%), Positives = 42/46 (91%) Frame = +1
Query: 517 YNKDDFQVSYEAAKFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLD 654 YNKDDF V Y AKFF+IKSYSEDDVHKSIKY+VWSSTPNGNK+L+ Sbjct: 65 YNKDDFPVDYVDAKFFVIKSYSEDDVHKSIKYNVWSSTPNGNKKLE 110
|