DK948953 |
Clone id |
TST38A01NGRL0004_L01 |
Library |
TST38 |
Length |
676 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_L01. 5' end sequence. |
Accession |
DK948953 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1504Contig1 |
Sequence |
CTCAATCTCAAAGTAGATGGCTGCAATGGCGACGATACCAATTCAGCTTCCGCGCTACCA GAGGGTTCAAAATGCATTTGGGCAGACCACGGTCGGCGGGCTGAGGCCAAGCTACATGCA ATGGGTGTCCACCAGGACTGCTTCATGTAAGAGCAAGTTGGGCGTTTGTCTGAGAGCACA AGCCTCTTCTTCCGAGCTCGCTGGGGCCGTCGACTGGGGTGAACCCATCTCCCTTGGCAC TGTAAAGCTGCCGGACAACATCAATCTTCAAAAGCTTGACATCCTTCTCTACCAGTGGGG AAGCAATCTCACGCAAAATGCAAATCTACCTCTGCCAGCCCCAATCAAGGTAGATAAAAT AAAGGGTGGAGTAAGGCTCGGCTACATCCGACTTGTGGATGGCGCTATTGAGGACCTTGC ACACATAGACTGTTGTGTCTTTCCAGGCACCAAAGATTCTAGTGCCATGTTTCGAGCAGT GAGAAGTGGACGTTTTAAGGACCAAGTTCCACCAGGTGAAGCCTTAATCATGCAAAGTCT GCTTCAATCGTTAAAGATGTCCATTCAGCTCGCANAAATGTGAAGCTTATGTAACATTCA GCTAAAACTCAGAGCTCATTTAAACTGTATATTTTAGCACTGATCAGCGGTGTAAATGCT ATTAGTGTTAGGCTAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P46814 |
Definition |
sp|P46814|DAPF_MYCLE Diaminopimelate epimerase OS=Mycobacterium leprae |
Align length |
37 |
Score (bit) |
32.7 |
E-value |
1.8 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKZ7 |
Definition |
tr|A9NKZ7|A9NKZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
121 |
Score (bit) |
167.0 |
E-value |
6.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948953|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_L01, 5' (676 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKZ7|A9NKZ7_PICSI Putative uncharacterized protein OS=Picea... 167 6e-40 tr|A9RYQ8|A9RYQ8_PHYPA Predicted protein (Fragment) OS=Physcomit... 163 8e-39 tr|B7ZYU1|B7ZYU1_MAIZE Putative uncharacterized protein OS=Zea m... 145 2e-33 tr|B6U3G5|B6U3G5_MAIZE Putative uncharacterized protein OS=Zea m... 145 2e-33 tr|Q94CW5|Q94CW5_ORYSJ cDNA clone:001-025-F01, full insert seque... 142 2e-32 tr|A2WX82|A2WX82_ORYSI Putative uncharacterized protein OS=Oryza... 142 2e-32 tr|A7PPA4|A7PPA4_VITVI Chromosome chr8 scaffold_23, whole genome... 137 8e-31 tr|A5BJZ6|A5BJZ6_VITVI Putative uncharacterized protein OS=Vitis... 137 8e-31 tr|A9NQI6|A9NQI6_PICSI Putative uncharacterized protein OS=Picea... 127 5e-28 tr|Q67XT7|Q67XT7_ARATH Putative uncharacterized protein At2g3614... 122 3e-26 tr|Q8VXY0|Q8VXY0_ARATH Putative uncharacterized protein At2g3614... 121 5e-26 tr|B6T6G8|B6T6G8_MAIZE Putative uncharacterized protein OS=Zea m... 108 2e-22 tr|A8IRT5|A8IRT5_CHLRE Predicted protein (Fragment) OS=Chlamydom... 46 0.002 tr|B8LPU9|B8LPU9_PICSI Putative uncharacterized protein OS=Picea... 43 0.016 tr|B8LKN5|B8LKN5_PICSI Putative uncharacterized protein OS=Picea... 43 0.016 tr|A4S6G1|A4S6G1_OSTLU Predicted protein OS=Ostreococcus lucimar... 43 0.021 tr|A4S8B0|A4S8B0_OSTLU Predicted protein OS=Ostreococcus lucimar... 40 0.14 tr|Q00UA5|Q00UA5_OSTTA Molecular chaperone (DnaJ superfamily) (I... 38 0.67 tr|A3K5W9|A3K5W9_9RHOB Putative oxidoreductase OS=Sagittula stel... 35 3.3 tr|A4CF91|A4CF91_9GAMM NH(3)-dependent NAD(+) synthetase OS=Pseu... 35 5.7 tr|O30894|O30894_MYXXA Putative uncharacterized protein OS=Myxoc... 34 9.6
>tr|A9NKZ7|A9NKZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 209
Score = 167 bits (423), Expect = 6e-40 Identities = 72/121 (59%), Positives = 105/121 (86%) Frame = +2
Query: 212 DWGEPISLGTVKLPDNINLQKLDILLYQWGSNLTQNANLPLPAPIKVDKIKGGVRLGYIR 391 D+GEPISLGT++LP N++++K++ LL+QWG++LTQ+A LPLP P+KVDK+KGG+RLG+++ Sbjct: 87 DFGEPISLGTMQLPSNVDVKKIESLLFQWGNSLTQSATLPLPVPLKVDKVKGGIRLGFVQ 146
Query: 392 LVDGAIEDLAHIDCCVFPGTKDSSAMFRAVRSGRFKDQVPPGEALIMQSLLQSLKMSIQL 571 + +G +EDL HIDC VFP + SSA+FRA+R+G+ K++ PPGE +IM+SLLQ+LK SI L Sbjct: 147 INEGKVEDLVHIDCLVFPSVEGSSAVFRALRNGKLKNETPPGEPMIMRSLLQALKKSIDL 206
Query: 572 A 574 + Sbjct: 207 S 207
>tr|A9RYQ8|A9RYQ8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_48298 PE=4 SV=1 Length = 135
Score = 163 bits (413), Expect = 8e-39 Identities = 80/134 (59%), Positives = 100/134 (74%) Frame = +2
Query: 173 RAQASSSELAGAVDWGEPISLGTVKLPDNINLQKLDILLYQWGSNLTQNANLPLPAPIKV 352 RAQA L + WGE +SLGT LP +++L +L+ LL+QWG++LT NANLPLP P+KV Sbjct: 1 RAQAGEGSLQQSDKWGEGVSLGTALLPPDVDLARLENLLFQWGNSLTANANLPLPTPLKV 60
Query: 353 DKIKGGVRLGYIRLVDGAIEDLAHIDCCVFPGTKDSSAMFRAVRSGRFKDQVPPGEALIM 532 D++KGGVRLGYIR+ +G IEDL HID V D F+A R+G+FKD+VPP E LIM Sbjct: 61 DRVKGGVRLGYIRINEGVIEDLVHIDVIVNAAEGDQKPYFQATRNGQFKDKVPPAEPLIM 120
Query: 533 QSLLQSLKMSIQLA 574 QSLLQ+LK SIQLA Sbjct: 121 QSLLQALKKSIQLA 134
>tr|B7ZYU1|B7ZYU1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 188
Score = 145 bits (367), Expect = 2e-33 Identities = 70/134 (52%), Positives = 96/134 (71%) Frame = +2
Query: 173 RAQASSSELAGAVDWGEPISLGTVKLPDNINLQKLDILLYQWGSNLTQNANLPLPAPIKV 352 RA + + A D + +SLGTVKLP NI+ +L+ LL+QWG++L Q ANLPLP P+KV Sbjct: 53 RASPAKGGIVPASDDDDGVSLGTVKLPGNIDTARLESLLFQWGNSLCQGANLPLPVPLKV 112
Query: 353 DKIKGGVRLGYIRLVDGAIEDLAHIDCCVFPGTKDSSAMFRAVRSGRFKDQVPPGEALIM 532 DK++GG+RLG++ + DGA L +IDC V P S +FRA+R+G KD+ PPGE IM Sbjct: 113 DKVEGGIRLGFVAVEDGATRTLVYIDCLVSPAPDGSGPVFRAIRNGPMKDKEPPGEPRIM 172
Query: 533 QSLLQSLKMSIQLA 574 +SLLQ+L+ SIQ+A Sbjct: 173 RSLLQALEKSIQIA 186
>tr|B6U3G5|B6U3G5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 197
Score = 145 bits (367), Expect = 2e-33 Identities = 70/134 (52%), Positives = 96/134 (71%) Frame = +2
Query: 173 RAQASSSELAGAVDWGEPISLGTVKLPDNINLQKLDILLYQWGSNLTQNANLPLPAPIKV 352 RA + + A D + +SLGTVKLP NI+ +L+ LL+QWG++L Q ANLPLP P+KV Sbjct: 62 RASPAKGGIVPASDDDDGVSLGTVKLPGNIDTARLESLLFQWGNSLCQGANLPLPVPLKV 121
Query: 353 DKIKGGVRLGYIRLVDGAIEDLAHIDCCVFPGTKDSSAMFRAVRSGRFKDQVPPGEALIM 532 DK++GG+RLG++ + DGA L +IDC V P S +FRA+R+G KD+ PPGE IM Sbjct: 122 DKVEGGIRLGFVAVEDGATRTLVYIDCLVSPAPDGSGPVFRAIRNGPMKDKEPPGEPRIM 181
Query: 533 QSLLQSLKMSIQLA 574 +SLLQ+L+ SIQ+A Sbjct: 182 RSLLQALEKSIQIA 195
>tr|Q94CW5|Q94CW5_ORYSJ cDNA clone:001-025-F01, full insert sequence OS=Oryza sativa subsp. japonica GN=P0423B08.8-1 PE=2 SV=1 Length = 186
Score = 142 bits (358), Expect = 2e-32 Identities = 69/134 (51%), Positives = 95/134 (70%) Frame = +2
Query: 173 RAQASSSELAGAVDWGEPISLGTVKLPDNINLQKLDILLYQWGSNLTQNANLPLPAPIKV 352 RA A E+ A D + +SLGTVKLP NI++ + + LL+QWG++L Q A LPLP P++V Sbjct: 51 RAAAGKDEIVRADDDDDGVSLGTVKLPANIDIARFETLLFQWGNSLCQGATLPLPVPLRV 110
Query: 353 DKIKGGVRLGYIRLVDGAIEDLAHIDCCVFPGTKDSSAMFRAVRSGRFKDQVPPGEALIM 532 DK++GGVRLG++ + DG + L +IDC V P T S +FRA+R+G KDQ PPGE IM Sbjct: 111 DKVEGGVRLGFMAVDDGVTQVLVYIDCLVSPATAASGPVFRAIRNGPMKDQEPPGEPRIM 170
Query: 533 QSLLQSLKMSIQLA 574 +SLL++L+ IQ A Sbjct: 171 RSLLEALQKCIQYA 184
>tr|A2WX82|A2WX82_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04525 PE=4 SV=1 Length = 186
Score = 142 bits (358), Expect = 2e-32 Identities = 69/134 (51%), Positives = 95/134 (70%) Frame = +2
Query: 173 RAQASSSELAGAVDWGEPISLGTVKLPDNINLQKLDILLYQWGSNLTQNANLPLPAPIKV 352 RA A E+ A D + +SLGTVKLP NI++ + + LL+QWG++L Q A LPLP P++V Sbjct: 51 RAAAGKDEIVRADDDDDGVSLGTVKLPANIDIARFETLLFQWGNSLCQGATLPLPVPLRV 110
Query: 353 DKIKGGVRLGYIRLVDGAIEDLAHIDCCVFPGTKDSSAMFRAVRSGRFKDQVPPGEALIM 532 DK++GGVRLG++ + DG + L +IDC V P T S +FRA+R+G KDQ PPGE IM Sbjct: 111 DKVEGGVRLGFMAVDDGVTQVLVYIDCLVSPATAASGPVFRAIRNGPMKDQEPPGEPRIM 170
Query: 533 QSLLQSLKMSIQLA 574 +SLL++L+ IQ A Sbjct: 171 RSLLEALQKCIQYA 184
>tr|A7PPA4|A7PPA4_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021574001 PE=4 SV=1 Length = 190
Score = 137 bits (344), Expect = 8e-31 Identities = 64/118 (54%), Positives = 87/118 (73%) Frame = +2
Query: 221 EPISLGTVKLPDNINLQKLDILLYQWGSNLTQNANLPLPAPIKVDKIKGGVRLGYIRLVD 400 E +SLGT+KLP + ++ + + LL+QW ++L Q ANLPLP P+KVD+I+GG RLG+I + D Sbjct: 71 EGVSLGTMKLPSDTDIPRFESLLFQWANSLCQGANLPLPVPLKVDRIQGGARLGFITIGD 130
Query: 401 GAIEDLAHIDCCVFPGTKDSSAMFRAVRSGRFKDQVPPGEALIMQSLLQSLKMSIQLA 574 G E L +IDC VFP T S FRA+R+G KD PPGE IM+SLLQ+LK S+++A Sbjct: 131 GKTEVLVYIDCLVFPATDGSGPTFRAIRNGPLKDLSPPGEPRIMRSLLQALKKSVEIA 188
>tr|A5BJZ6|A5BJZ6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006537 PE=4 SV=1 Length = 138
Score = 137 bits (344), Expect = 8e-31 Identities = 64/118 (54%), Positives = 87/118 (73%) Frame = +2
Query: 221 EPISLGTVKLPDNINLQKLDILLYQWGSNLTQNANLPLPAPIKVDKIKGGVRLGYIRLVD 400 E +SLGT+KLP + ++ + + LL+QW ++L Q ANLPLP P+KVD+I+GG RLG+I + D Sbjct: 19 EGVSLGTMKLPSDTDIPRFESLLFQWANSLCQGANLPLPVPLKVDRIQGGARLGFITIGD 78
Query: 401 GAIEDLAHIDCCVFPGTKDSSAMFRAVRSGRFKDQVPPGEALIMQSLLQSLKMSIQLA 574 G E L +IDC VFP T S FRA+R+G KD PPGE IM+SLLQ+LK S+++A Sbjct: 79 GKTEVLVYIDCLVFPATDGSGPTFRAIRNGPLKDLSPPGEPRIMRSLLQALKKSVEIA 136
>tr|A9NQI6|A9NQI6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 191
Score = 127 bits (320), Expect = 5e-28 Identities = 60/121 (49%), Positives = 89/121 (73%) Frame = +2
Query: 212 DWGEPISLGTVKLPDNINLQKLDILLYQWGSNLTQNANLPLPAPIKVDKIKGGVRLGYIR 391 D+GEPISLGT++LP N++++K++ LL+Q VDK+KGG+RLG+++ Sbjct: 87 DFGEPISLGTMQLPSNVDVKKIESLLFQ------------------VDKVKGGIRLGFVQ 128
Query: 392 LVDGAIEDLAHIDCCVFPGTKDSSAMFRAVRSGRFKDQVPPGEALIMQSLLQSLKMSIQL 571 + +G +EDL HIDC VFP + SSA+FRA+R+G+ K++ PPGE +IM+SLLQ+LK SI L Sbjct: 129 INEGKVEDLVHIDCLVFPSVEGSSAVFRALRNGKLKNETPPGEPMIMRSLLQALKKSIDL 188
Query: 572 A 574 + Sbjct: 189 S 189
>tr|Q67XT7|Q67XT7_ARATH Putative uncharacterized protein At2g36145 (Fragment) OS=Arabidopsis thaliana GN=At2g36145 PE=2 SV=1 Length = 189
Score = 122 bits (305), Expect = 3e-26 Identities = 74/191 (38%), Positives = 115/191 (60%), Gaps = 2/191 (1%) Frame = +2
Query: 8 SK*MAAMATIPIQLPRYQRVQNAF-GQTTVGGLRPSYMQWVSTRTASCKSKLGVCLRAQA 184 S+ MA AT+ + P R F G+ ++ P +Q + T A+ ++ + A A Sbjct: 1 SRKMAFAATLFVPPPVAVRSPARFLGRLSI----PCLLQVLPTNGAASPRQVKRAIVANA 56
Query: 185 SSSELAGAVDWGEPISLGTVKLPDNINLQKLDILLYQWGSNLTQNANLPLPAPIKVDKIK 364 S + + +SLGT+KLP + +L + + LL+QW ++L Q ANLPLP P+KVD+I Sbjct: 57 SPGNGGVKAEEEDGVSLGTMKLPVDTDLARFETLLFQWANSLCQGANLPLPVPLKVDRIS 116
Query: 365 GGVRLGYIRLVDGAIEDL-AHIDCCVFPGTKDSSAMFRAVRSGRFKDQVPPGEALIMQSL 541 GG RLG+I + D D+ +IDC VF T ++ +F+A R+GR KD+ PPGE IM+SL Sbjct: 117 GGARLGFIVMEDEGKTDVPVYIDCLVFQ-TTENGVVFQATRNGRKKDKAPPGEERIMRSL 175
Query: 542 LQSLKMSIQLA 574 L +LK ++++A Sbjct: 176 LGALKKAVEIA 186
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