DK948968 |
Clone id |
TST38A01NGRL0004_L17 |
Library |
TST38 |
Length |
564 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_L17. 5' end sequence. |
Accession |
DK948968 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL101Contig1 |
Sequence |
GCTACTTGCTCGGAGAGTTTTGAAGCAGTTTGATCTAGACCAGGAATATGTTGGCAATGA GGAGGCTACAGGGGAGGACTATAACGTTGAGGAGGCTGGTGAACGCCGACCTTTCAGGGC CCTCCTTGATGTTGGCCTTGTGAGAACCACCACGGGGAACCGGGTTTTTGGAGCCTTGAA GGGTGCTTTAGATGGGGGTCTGGATGTTCCACATAGTGACAAGAGGTTTGCAGGGTATAG TAAAGAAGAGAAGTCATTGAATGCAGATGCTCATAGGAGATATATTTTTGGAGGTCATGT GGCTGATTACATGAAGATGCTGCGTGAGGATGAGCCCGAGAAGTACCAGCTTCAGTTCAG CTCTTTTATAAAGAATGGGGTGGAGCCTGAAAGTTTGGAGGAAGTGTACAAGAGTGTACA TGCTGCGATTAGGGCTGACCCTTCAATTAAGCACACTGAGAAGCATGTGCCAGCAGAGAG GAAGAGCTATAAAATGAAGAAGCTTACTTACGAGGAGAGGAAGGCTAACTTGATTGCTCG TCTCANTGCTATCAATGAGGTTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P49227 |
Definition |
sp|P49227|RL52_ARATH 60S ribosomal protein L5-2 OS=Arabidopsis thaliana |
Align length |
185 |
Score (bit) |
242.0 |
E-value |
1.0e-63 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKC3 |
Definition |
tr|A9NKC3|A9NKC3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
185 |
Score (bit) |
265.0 |
E-value |
1.0e-69 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948968|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_L17, 5' (564 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKC3|A9NKC3_PICSI Putative uncharacterized protein OS=Picea... 265 1e-69 tr|A9SNA3|A9SNA3_PHYPA Predicted protein OS=Physcomitrella paten... 261 2e-68 tr|A9TXS7|A9TXS7_PHYPA Predicted protein OS=Physcomitrella paten... 259 5e-68 tr|A9S013|A9S013_PHYPA Predicted protein OS=Physcomitrella paten... 256 8e-67 tr|A9TYC5|A9TYC5_PHYPA Predicted protein OS=Physcomitrella paten... 254 2e-66 tr|A9PB43|A9PB43_POPTR Putative uncharacterized protein OS=Popul... 251 1e-65 tr|B7FJX5|B7FJX5_MEDTR Putative uncharacterized protein OS=Medic... 250 4e-65 tr|Q9AVH1|Q9AVH1_PEA Putative senescence-associated protein OS=P... 243 4e-63 tr|B6TYP7|B6TYP7_MAIZE 60S ribosomal protein L5-1 OS=Zea mays PE... 242 1e-62 tr|A7QAV5|A7QAV5_VITVI Chromosome chr5 scaffold_72, whole genome... 242 1e-62 tr|A7R4R2|A7R4R2_VITVI Chromosome undetermined scaffold_763, who... 241 2e-62 tr|A9PFA8|A9PFA8_POPTR Putative uncharacterized protein OS=Popul... 240 4e-62 tr|B8A7P9|B8A7P9_ORYSI Putative uncharacterized protein OS=Oryza... 238 2e-61 tr|B7EWY9|B7EWY9_ORYSJ 60S ribosomal protein L5 OS=Oryza sativa ... 238 2e-61 tr|B6THG9|B6THG9_MAIZE 60S ribosomal protein L5-1 OS=Zea mays PE... 238 2e-61 tr|A3A0I1|A3A0I1_ORYSJ Putative uncharacterized protein OS=Oryza... 238 2e-61 tr|Q0JGY2|Q0JGY2_ORYSJ Os01g0896700 protein (Putative uncharacte... 236 5e-61 tr|B8A7P8|B8A7P8_ORYSI Putative uncharacterized protein OS=Oryza... 236 5e-61 tr|B7SDE4|B7SDE4_ORYSJ 60S ribosomal protein L5 OS=Oryza sativa ... 236 5e-61 tr|Q38HU5|Q38HU5_SOLTU Putative uncharacterized protein OS=Solan... 232 1e-59 tr|A9PBZ9|A9PBZ9_POPTR Putative uncharacterized protein OS=Popul... 227 3e-58 tr|A9PH69|A9PH69_POPTR Putative uncharacterized protein OS=Popul... 227 4e-58 tr|A8WNL0|A8WNL0_CAEBR CBR-RPL-5 protein OS=Caenorhabditis brigg... 177 4e-43 tr|B4KFT7|B4KFT7_DROMO GI17484 OS=Drosophila mojavensis GN=GI174... 169 7e-41 tr|B2B802|B2B802_PODAN Predicted CDS Pa_2_12840 OS=Podospora ans... 169 1e-40 tr|Q7PL67|Q7PL67_DROME Ribosomal protein L5, isoform C (Fragment... 167 4e-40 tr|B4IT18|B4IT18_DROYA Yip6 OS=Drosophila yakuba GN=Dyak\yip6 PE... 167 4e-40 tr|B4IKU1|B4IKU1_DROSE GM26730 OS=Drosophila sechellia GN=GM2673... 167 4e-40 tr|B3NKK9|B3NKK9_DROER GG21448 (Fragment) OS=Drosophila erecta G... 167 4e-40 tr|B4LQQ5|B4LQQ5_DROVI GJ15046 OS=Drosophila virilis GN=GJ15046 ... 166 8e-40
>tr|A9NKC3|A9NKC3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 297
Score = 265 bits (677), Expect = 1e-69 Identities = 130/185 (70%), Positives = 150/185 (81%) Frame = +2
Query: 2 LLARRVLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXX 181 LLARRVLKQ ++D+EYVGNEEA+GEDY+VE RRPFRALLDVGLVRTTTGNRVF Sbjct: 104 LLARRVLKQLEMDEEYVGNEEASGEDYSVEPNDARRPFRALLDVGLVRTTTGNRVFGALK 163
Query: 182 XXXXXXXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFS 361 +PHSDKRFAGY+KE KSL+AD HR+YI GGHVA YMK LREDEPEKYQ QFS Sbjct: 164 GALDGGLDIPHSDKRFAGYNKESKSLDADLHRKYILGGHVAAYMKTLREDEPEKYQSQFS 223
Query: 362 SFIKNGVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIAR 541 + K G+EPE++EE+YK VHAAIRADP+IK++EKHVP +K Y +KLTYEERK LIAR Sbjct: 224 EYHKKGIEPENIEELYKKVHAAIRADPTIKYSEKHVPKVQKHYLTRKLTYEERKNKLIAR 283
Query: 542 LXAIN 556 L A+N Sbjct: 284 LNALN 288
>tr|A9SNA3|A9SNA3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_214065 PE=4 SV=1 Length = 293
Score = 261 bits (666), Expect = 2e-68 Identities = 127/185 (68%), Positives = 151/185 (81%) Frame = +2
Query: 2 LLARRVLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXX 181 LLARR LK F+LDQEYVGNE+ATGEDYNVEE +RPFRALLDVGLVRTTTGNRVF Sbjct: 104 LLARRHLKNFELDQEYVGNEQATGEDYNVEEGEGKRPFRALLDVGLVRTTTGNRVFGALK 163
Query: 182 XXXXXXXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFS 361 VPHS+KRFAGYSKE+KSLNA+ HR+YI GGH+ADYM++L+EDEPEKYQ FS Sbjct: 164 GALDGGLDVPHSEKRFAGYSKEDKSLNAETHRKYILGGHIADYMRLLKEDEPEKYQSHFS 223
Query: 362 SFIKNGVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIAR 541 FIK GVE ++L E+Y SVHAAIRADP+ + TEK PAE++ +K++KLTYEER+A L+ R Sbjct: 224 GFIKAGVEADNLAEMYTSVHAAIRADPTQQKTEKKAPAEKRKWKIQKLTYEERQAALVKR 283
Query: 542 LXAIN 556 L A+N Sbjct: 284 LNAVN 288
>tr|A9TXS7|A9TXS7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_199314 PE=4 SV=1 Length = 293
Score = 259 bits (663), Expect = 5e-68 Identities = 128/185 (69%), Positives = 150/185 (81%) Frame = +2
Query: 2 LLARRVLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXX 181 LLARR LK +DLD EYVGNE+ATGEDYNVEE +RPFRALLDVGLVRTTTGNRVF Sbjct: 104 LLARRHLKNYDLDDEYVGNEQATGEDYNVEEGEGKRPFRALLDVGLVRTTTGNRVFGALK 163
Query: 182 XXXXXXXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFS 361 VPHS+KRFAGY+KE+KSLNA+ HR+YI GGHVADYMK+L+EDEPEKYQ FS Sbjct: 164 GALDGGLDVPHSEKRFAGYNKEDKSLNAEIHRKYILGGHVADYMKLLKEDEPEKYQSHFS 223
Query: 362 SFIKNGVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIAR 541 FIK GVE E+L E+Y SVHAAIRADP+ + TEK PAE++ +K++KLTY+ER+A L+ R Sbjct: 224 GFIKAGVEAENLAEMYTSVHAAIRADPTQQKTEKKAPAEKRKWKIQKLTYDERQAALVKR 283
Query: 542 LXAIN 556 L AIN Sbjct: 284 LNAIN 288
>tr|A9S013|A9S013_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_207358 PE=4 SV=1 Length = 293
Score = 256 bits (653), Expect = 8e-67 Identities = 125/185 (67%), Positives = 147/185 (79%) Frame = +2
Query: 2 LLARRVLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXX 181 LLARR LK F+LDQEYVGNE ATGEDYNVEE +RPFRALLDVGLVRTTTGNRVF Sbjct: 104 LLARRHLKNFELDQEYVGNETATGEDYNVEEGEGKRPFRALLDVGLVRTTTGNRVFGALK 163
Query: 182 XXXXXXXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFS 361 VPHS+KRFAGYSKE+KSLNA+ HR+YI GGHVADYM++L+EDEPEKYQ FS Sbjct: 164 GALDGGLDVPHSEKRFAGYSKEDKSLNAEIHRKYILGGHVADYMRLLKEDEPEKYQSHFS 223
Query: 362 SFIKNGVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIAR 541 FIK G+E + L ++Y VHAAIRADP+ + T K PAE++ +K++KLTYEER+A L+ R Sbjct: 224 GFIKEGIEADDLADMYSKVHAAIRADPTSQKTAKKAPAEKRKWKIQKLTYEERQAALVKR 283
Query: 542 LXAIN 556 L AIN Sbjct: 284 LNAIN 288
>tr|A9TYC5|A9TYC5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226607 PE=4 SV=1 Length = 293
Score = 254 bits (649), Expect = 2e-66 Identities = 124/185 (67%), Positives = 147/185 (79%) Frame = +2
Query: 2 LLARRVLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXX 181 LLARR LK F+LDQEYVGNE ATGEDYNVEE +RPFRALLDVGLVRTTTGNRVF Sbjct: 104 LLARRHLKNFELDQEYVGNETATGEDYNVEEGEGKRPFRALLDVGLVRTTTGNRVFGALK 163
Query: 182 XXXXXXXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFS 361 VPHS+KRFAG+SKE+KSLNA+ HR+YI GGHVADYM++L+EDEPEKYQ F+ Sbjct: 164 GALDGGLDVPHSEKRFAGFSKEDKSLNAETHRKYILGGHVADYMRLLKEDEPEKYQSHFN 223
Query: 362 SFIKNGVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIAR 541 FIK G+E + L E+Y VHAAIRADP + TEK PAE++ +K++KLT+EER+A L+ R Sbjct: 224 KFIKEGIEADELAEMYTKVHAAIRADPDQQKTEKKAPAEKRKWKIQKLTFEERQAALVQR 283
Query: 542 LXAIN 556 L AIN Sbjct: 284 LNAIN 288
>tr|A9PB43|A9PB43_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 298
Score = 251 bits (642), Expect = 1e-65 Identities = 120/185 (64%), Positives = 146/185 (78%) Frame = +2
Query: 2 LLARRVLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXX 181 LLARRVLK+ ++D+EY GN EATGEDY+VE A RRPFRALLDVGLVRTTTGNRVF Sbjct: 104 LLARRVLKKLEMDEEYEGNVEATGEDYSVEPADSRRPFRALLDVGLVRTTTGNRVFGALK 163
Query: 182 XXXXXXXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFS 361 +PHSDKRFAG++K+ K L+A+ HR+YI+GGHVA YM+ L EDEPEKYQ FS Sbjct: 164 GALDGGLDIPHSDKRFAGFNKDGKQLDAEVHRKYIYGGHVAAYMRNLMEDEPEKYQSHFS 223
Query: 362 SFIKNGVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIAR 541 +IK G+EP+++EE+YK VHAAIRADP+ K +EK +P E K Y +KKLTYEERKA L+ R Sbjct: 224 EYIKRGIEPDNMEELYKKVHAAIRADPTAKKSEKQLPKEHKRYNLKKLTYEERKAKLVER 283
Query: 542 LXAIN 556 L A+N Sbjct: 284 LKALN 288
>tr|B7FJX5|B7FJX5_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 302
Score = 250 bits (638), Expect = 4e-65 Identities = 121/185 (65%), Positives = 144/185 (77%) Frame = +2
Query: 2 LLARRVLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXX 181 LLARRVLK ++D+EY GN EATGEDY+VE A RRPFRALLDVGLV+TTTGNRVF Sbjct: 104 LLARRVLKTLEMDEEYEGNVEATGEDYSVEPAESRRPFRALLDVGLVKTTTGNRVFGALK 163
Query: 182 XXXXXXXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFS 361 +PHSDKRFAG+ KE+K L+A+ HR+YIFGGHV+ YMK L EDEPEKYQ FS Sbjct: 164 GALDGGLDIPHSDKRFAGFDKEKKELDAEVHRKYIFGGHVSAYMKTLIEDEPEKYQTHFS 223
Query: 362 SFIKNGVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIAR 541 +IK G+E + LEE+YK VHAAIRADP+IK +EK P + K Y +KKLTYEERKA L++R Sbjct: 224 EYIKKGIEADGLEELYKKVHAAIRADPTIKKSEKQPPKQHKRYNLKKLTYEERKAKLVSR 283
Query: 542 LXAIN 556 L A+N Sbjct: 284 LAALN 288
>tr|Q9AVH1|Q9AVH1_PEA Putative senescence-associated protein OS=Pisum sativum GN=ssa-15 PE=2 SV=1 Length = 279
Score = 243 bits (621), Expect = 4e-63 Identities = 118/185 (63%), Positives = 140/185 (75%) Frame = +2
Query: 2 LLARRVLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXX 181 LLARRVLK ++D+EY GN EA+GEDY+VE A RRPFRALLDVGLV+TTTGNRVF Sbjct: 84 LLARRVLKTLEMDEEYEGNVEASGEDYSVEPADSRRPFRALLDVGLVKTTTGNRVFGALK 143
Query: 182 XXXXXXXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFS 361 +PHSDKRFAG+ KE+K L+A+ HR+YIFGGHV YMK L EDEPEKYQ FS Sbjct: 144 GALDGGLDIPHSDKRFAGFDKEKKELDAEVHRKYIFGGHVTAYMKTLIEDEPEKYQTHFS 203
Query: 362 SFIKNGVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIAR 541 +IK G+E + +EE+YK VHAAIRADP+ K EK P E K Y +KKLTY+ER+ LIAR Sbjct: 204 QYIKKGIEADGIEELYKKVHAAIRADPANKKAEKQPPKEHKRYNLKKLTYDERRTKLIAR 263
Query: 542 LXAIN 556 L A+N Sbjct: 264 LEALN 268
>tr|B6TYP7|B6TYP7_MAIZE 60S ribosomal protein L5-1 OS=Zea mays PE=2 SV=1 Length = 302
Score = 242 bits (617), Expect = 1e-62 Identities = 120/185 (64%), Positives = 141/185 (76%) Frame = +2
Query: 2 LLARRVLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXX 181 LLARRVLK LD+EY GN EATGED++VE A ERRPFRALLDVGL+RTTTGNRVF Sbjct: 105 LLARRVLKIRGLDKEYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTTTGNRVFGALK 164
Query: 182 XXXXXXXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFS 361 +PHS+KRFAG+ K++K L+AD HRRYI+GGHVADYMK L E+EPEKYQ FS Sbjct: 165 GALDGGLDIPHSEKRFAGFKKDDKQLDADTHRRYIYGGHVADYMKNLAEEEPEKYQSHFS 224
Query: 362 SFIKNGVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIAR 541 ++IK GVE E +E +YK VHAAIRADPS+ + K P E K Y KKLTYE+RKA+LI R Sbjct: 225 AYIKKGVEAEEIEALYKKVHAAIRADPSVVKSTKQPPKEHKRYNPKKLTYEQRKASLIER 284
Query: 542 LXAIN 556 L +N Sbjct: 285 LNQLN 289
>tr|A7QAV5|A7QAV5_VITVI Chromosome chr5 scaffold_72, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034699001 PE=4 SV=1 Length = 307
Score = 242 bits (617), Expect = 1e-62 Identities = 120/185 (64%), Positives = 138/185 (74%) Frame = +2
Query: 2 LLARRVLKQFDLDQEYVGNEEATGEDYNVEEAGERRPFRALLDVGLVRTTTGNRVFXXXX 181 LLARRVLK ++D EY GN EATGEDY+VE RRPFRALLDVGLVRTTTGNRVF Sbjct: 110 LLARRVLKMLEMDGEYEGNVEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALK 169
Query: 182 XXXXXXXXVPHSDKRFAGYSKEEKSLNADAHRRYIFGGHVADYMKMLREDEPEKYQLQFS 361 +PHSDKRFAG+SK+ K L+A+ HR+YI+GGHV+ YM L EDEPEKYQ FS Sbjct: 170 GALDGGLDIPHSDKRFAGFSKDSKQLDAEVHRKYIYGGHVSAYMGTLIEDEPEKYQSHFS 229
Query: 362 SFIKNGVEPESLEEVYKSVHAAIRADPSIKHTEKHVPAERKSYKMKKLTYEERKANLIAR 541 +IK GVEP+ +EE+YK VHAAIRA+P K EK P E K Y +KKLTYEERKA LI R Sbjct: 230 EYIKKGVEPDDIEEMYKKVHAAIRANPIQKKVEKQPPKEHKRYNLKKLTYEERKAKLIER 289
Query: 542 LXAIN 556 L A+N Sbjct: 290 LNALN 294
|