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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK948973
Clone id TST38A01NGRL0004_L23
Library
Length 707
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_L23. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
ATTCTCTACCATATCGGGCTGCGTCTCCTTGACACCGGGGCTTGCCATTTTCATCCTGCT
CTGCACATTTCTTCATACTCCCAAGCTCCTCTCCCAGCTGCTCTGCAGTACTTCTCTGCA
TTCTATTTCGCCACCATCTTTTGCATATACGTAGATCTCCTAGCACTGCGTTTGATTTGC
TTCTTTTCAATACAGCTATGGGCTTTCGGATTGTGCCCGCGCTGCTTGTAGCTTTTGCTT
GCATCCATTACGTAGCGCTCGCTTCTATCGACGATAACCTCGCTGCCAGCGCCAAGAAAT
ACAAATCCTGCAAGAAGAGGGCTGCCACTCTCTGCGGGCCTAGCTCCTTCACCTTCTACC
TGCACAACACCGTCTACAACCCCGCCGTCGACAACGCCNATAACTTCACCTCTGTGTATG
GCGTGCAACCTAATGTGACGTGGACCAATACCTACGCCTTCGGCACCACCTCCACATTCG
AGGACCCGCTCACAAGCGGGCCCGCCACCGACTCGCAGCAGATAGGCGTAGCTCACGGCT
TCTGGCAGCTCAACAGCAAGGTAGGCTACACTCTCTTCCACATCTTCACCGCCNACATTA
CCGAGGGCGACCACAAGGGCACCATCGACATCTTTGGCCAGGTTCGCGAGATCGACCCCG
TCCGCTACCTCACCGTCATCGGCGGCACAGGCGATTTCCTGGGCGCC
■■Homology search results ■■ -
sp_hit_id P13240
Definition sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum
Align length 122
Score (bit) 67.4
E-value 7.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948973|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_L23, 5'
         (707 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13240|DR206_PEA Disease resistance response protein 206 OS=P...    67   7e-11
sp|Q98NF9|ADEC_RHILO Adenine deaminase OS=Rhizobium loti GN=ade ...    34   0.88 

>sp|P13240|DR206_PEA Disease resistance response protein 206
           OS=Pisum sativum GN=PI206 PE=2 SV=2
          Length = 184

 Score = 67.4 bits (163), Expect = 7e-11
 Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
 Frame = +3

Query: 345 SFTFYLHNTVYNPAVDNAXNFTSVYGVQPNVTWTNTYA----FGTTSTFEDPLTSGPATD 512
           +  FY H+ +YN    NA N TS     P        A    FG    F+DP+T   +  
Sbjct: 33  NLVFYFHDILYNGK--NAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLS 90

Query: 513 SQQIGVAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTG 692
           S+Q+G A GF+  ++K  YT +  FT  +    H+GTI   G    +   R ++V GGTG
Sbjct: 91  SKQVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQGTITFAGADPIVAKTRDISVTGGTG 150

Query: 693 DF 698
           DF
Sbjct: 151 DF 152


>sp|Q98NF9|ADEC_RHILO Adenine deaminase OS=Rhizobium loti GN=ade
           PE=3 SV=1
          Length = 605

 Score = 33.9 bits (76), Expect = 0.88
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
 Frame = +3

Query: 381 PAVDNAXNFTSVYGVQPNVTWTNTYAFGTTSTF-----EDPLTSGPATDSQQIGVAHGFW 545
           P +++A    +V  V   +TW N    G    F      DP+ SG    + + G   G  
Sbjct: 162 PGLEHAGAELTVADVAEAMTWENIIGLGEVMNFPGVAANDPVMSGEIAATVRAGKTVGGH 221

Query: 546 QLNSKVGYTLFHIFTAXITEGDHKGT--IDIFGQVRE 650
             +  +G   FH + A   E DH+GT   D   +VR+
Sbjct: 222 YASRDLGLP-FHGYVAGGPEDDHEGTRAEDAIARVRQ 257
tr_hit_id B2WS85
Definition tr|B2WS85|B2WS85_9BRAS Disease resistance-responsive family protein OS=Capsella rubella
Align length 120
Score (bit) 72.8
E-value 2.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948973|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_L23, 5'
         (707 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2WS85|B2WS85_9BRAS Disease resistance-responsive family prot...    73   2e-11
tr|A8IXC9|A8IXC9_BRACM Disease resistance response protein OS=Br...    71   8e-11
tr|B2WS65|B2WS65_ARAHA Putative disease resistance protein OS=Ar...    70   1e-10
tr|Q9SUQ8|Q9SUQ8_ARATH Putative disease resistance response prot...    70   2e-10
tr|Q9T017|Q9T017_ARATH Putative disease resistance response prot...    69   4e-10
tr|Q9SDQ9|Q9SDQ9_THUPL Dirigent protein OS=Thuja plicata GN=psd_...    69   4e-10
tr|Q9SDQ8|Q9SDQ8_THUPL Dirigent-like protein OS=Thuja plicata GN...    67   9e-10
tr|Q9SDR1|Q9SDR1_THUPL Dirigent-like protein OS=Thuja plicata GN...    67   1e-09
tr|Q9SDR0|Q9SDR0_THUPL Dirigent-like protein OS=Thuja plicata GN...    67   1e-09
tr|Q9SDR5|Q9SDR5_THUPL Dirigent-like protein OS=Thuja plicata GN...    66   3e-09
tr|Q9SDR2|Q9SDR2_THUPL Dirigent-like protein OS=Thuja plicata GN...    66   3e-09
tr|Q9SYU1|Q9SYU1_PEA Pathogenesis-related protein OS=Pisum sativ...    65   4e-09
tr|Q9SDR3|Q9SDR3_THUPL Dirigent-like protein OS=Thuja plicata GN...    65   6e-09
tr|Q27J96|Q27J96_PICSI Dirigent protein pDIR16 OS=Picea sitchens...    64   7e-09
tr|Q27J97|Q27J97_PICSI Dirigent protein pDIR15 OS=Picea sitchens...    64   1e-08
tr|Q943Q0|Q943Q0_ORYSJ Putative uncharacterized protein P0011G08...    64   1e-08
tr|Q27J94|Q27J94_PICGL Dirigent protein pDIR18 OS=Picea glauca P...    64   1e-08
tr|A2ZPF2|A2ZPF2_ORYSJ Putative uncharacterized protein OS=Oryza...    64   1e-08
tr|A2WKV1|A2WKV1_ORYSI Putative uncharacterized protein OS=Oryza...    64   1e-08
tr|Q27JA4|Q27JA4_9CONI Dirigent protein pDIR8 OS=Picea engelmann...    63   2e-08
tr|A6YR10|A6YR10_PICSI Dirigent-like protein OS=Picea sitchensis...    63   2e-08
tr|Q9SH66|Q9SH66_ARATH F22C12.8 (Putative dirigent protein) (At1...    63   2e-08
tr|A6YR09|A6YR09_PICSI Dirigent-like protein OS=Picea sitchensis...    63   2e-08
tr|Q9T019|Q9T019_ARATH Putative disease resistance response prot...    62   3e-08
tr|Q27J93|Q27J93_PICSI Dirigent protein pDIR19 (Fragment) OS=Pic...    62   3e-08
tr|O82498|O82498_ARATH F2P3.6 protein (Putative disease resistan...    62   4e-08
tr|Q27JA7|Q27JA7_9CONI Dirigent protein pDIR5 OS=Picea engelmann...    62   5e-08
tr|B6TVE6|B6TVE6_MAIZE Dirigent-like protein OS=Zea mays PE=2 SV=1     61   6e-08
tr|Q9SDQ7|Q9SDQ7_TSUHE Dirigent-like protein OS=Tsuga heterophyl...    61   8e-08
tr|B7FHC7|B7FHC7_MEDTR Putative uncharacterized protein OS=Medic...    61   8e-08

>tr|B2WS85|B2WS85_9BRAS Disease resistance-responsive family protein
           OS=Capsella rubella GN=6J23.5 PE=4 SV=1
          Length = 187

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 41/120 (34%), Positives = 62/120 (51%)
 Frame = +3

Query: 348 FTFYLHNTVYNPAVDNAXNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 527
           F+FY H+ +Y+   DN  N TS   V P       + FG    F+DP+T      S+ + 
Sbjct: 43  FSFYFHDILYDG--DNVANATSAAIVSP--PGLGNFKFGKFVIFDDPITMDKNYLSEPVA 98

Query: 528 VAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTGDFLGA 707
            A GF+  + K+ +  +  +T       HKGT++I G    ++P R L+V+GGTGDF  A
Sbjct: 99  RAQGFYFYDMKMDFNAWFCYTLVFNSTQHKGTLNIMGADLMMEPTRDLSVVGGTGDFFMA 158


>tr|A8IXC9|A8IXC9_BRACM Disease resistance response protein
           OS=Brassica campestris PE=2 SV=1
          Length = 187

 Score = 70.9 bits (172), Expect = 8e-11
 Identities = 41/120 (34%), Positives = 61/120 (50%)
 Frame = +3

Query: 348 FTFYLHNTVYNPAVDNAXNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 527
           F+FY H+ +Y+   DN  N TS   V P       + FG    F+ P+T      S+ + 
Sbjct: 43  FSFYFHDILYDG--DNVANATSAAIVSP--PGLGNFKFGKFVIFDGPITMDKNYLSEPVA 98

Query: 528 VAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTGDFLGA 707
            A GF+  + K  +  +  FT      +HKGT++I G    ++P R L+V+GGTGDF  A
Sbjct: 99  RAQGFYFYDMKTDFNSWFSFTLVFNSTEHKGTLNIMGADLMMEPTRDLSVVGGTGDFFMA 158


>tr|B2WS65|B2WS65_ARAHA Putative disease resistance protein
           OS=Arabidopsis halleri GN=8F2.4 PE=4 SV=1
          Length = 187

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 40/120 (33%), Positives = 62/120 (51%)
 Frame = +3

Query: 348 FTFYLHNTVYNPAVDNAXNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 527
           F+FY H+ +Y+   DN  N TS   V P       + FG    F+ P+T      S+ + 
Sbjct: 43  FSFYFHDILYDG--DNVANATSAAIVSP--PGLGNFKFGKFVIFDGPITMDKNYLSKPLA 98

Query: 528 VAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTGDFLGA 707
            A GF+  + K+ +  +  +T      +HKGT++I G    ++P R L+V+GGTGDF  A
Sbjct: 99  RAQGFYFYDMKMDFNAWFCYTLVFNSTEHKGTLNIMGADLMMEPTRDLSVVGGTGDFFMA 158


>tr|Q9SUQ8|Q9SUQ8_ARATH Putative disease resistance response protein
           OS=Arabidopsis thaliana GN=F9D16.160 PE=2 SV=1
          Length = 187

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/120 (33%), Positives = 62/120 (51%)
 Frame = +3

Query: 348 FTFYLHNTVYNPAVDNAXNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 527
           F+FY H+ +Y+   DN  N TS   V P       + FG    F+ P+T      S+ + 
Sbjct: 43  FSFYFHDILYDG--DNVANATSAAIVSP--PGLGNFKFGKFVIFDGPITMDKNYLSKPVA 98

Query: 528 VAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTGDFLGA 707
            A GF+  + K+ +  +  +T      +HKGT++I G    ++P R L+V+GGTGDF  A
Sbjct: 99  RAQGFYFYDMKMDFNSWFSYTLVFNSTEHKGTLNIMGADLMMEPTRDLSVVGGTGDFFMA 158


>tr|Q9T017|Q9T017_ARATH Putative disease resistance response protein
           (At4g11190) OS=Arabidopsis thaliana GN=AT4g11190 PE=2
           SV=1
          Length = 184

 Score = 68.6 bits (166), Expect = 4e-10
 Identities = 39/118 (33%), Positives = 59/118 (50%)
 Frame = +3

Query: 348 FTFYLHNTVYNPAVDNAXNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 527
           F FYLHN  Y+   DN  N TS   V P       ++FG     ++P+T      S+Q+ 
Sbjct: 39  FVFYLHNVAYDG--DNTDNATSAAIVNP--LGLGDFSFGKFVIMDNPVTMDQNMLSEQVA 94

Query: 528 VAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTGDFL 701
              GF+  + K  Y  +  ++       HKG ++I G+   ++P R L V+GGTGDF+
Sbjct: 95  RVQGFFFYHGKTKYDTWLSWSVVFNSTQHKGALNIMGENAFMEPTRDLPVVGGTGDFV 152


>tr|Q9SDQ9|Q9SDQ9_THUPL Dirigent protein OS=Thuja plicata GN=psd_Tp7
           PE=2 SV=1
          Length = 192

 Score = 68.6 bits (166), Expect = 4e-10
 Identities = 45/125 (36%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
 Frame = +3

Query: 345 SFTFYLHNTVYNPAVDNAXNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 512
           +   Y H+ +YN    NA N TS     P   N+T  T  Y FG  S F+DP+T      
Sbjct: 41  NLVLYFHDIIYNGK--NAGNATSTLVAAPQGANLTIMTGNYHFGDLSVFDDPITVDNNLH 98

Query: 513 SQQIGVAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTG 692
           S  +G A GF+  + K  ++ +  FT  +   D+KGTI   G    +   R ++V+GGTG
Sbjct: 99  SPPVGRAQGFYFYDMKNTFSAWLGFTFVLNSTDYKGTITFGGADPILAKYRDISVVGGTG 158

Query: 693 DFLGA 707
           DFL A
Sbjct: 159 DFLMA 163


>tr|Q9SDQ8|Q9SDQ8_THUPL Dirigent-like protein OS=Thuja plicata
           GN=psd_Tp8 PE=2 SV=1
          Length = 192

 Score = 67.4 bits (163), Expect = 9e-10
 Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
 Frame = +3

Query: 345 SFTFYLHNTVYNPAVDNAXNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 512
           +   Y H+ +YN    NA N TS     P   N+T  T  Y FG  + F+DP+T      
Sbjct: 41  NLVLYFHDIIYNGK--NAGNATSTLVAAPQGANLTIMTGNYHFGDLAVFDDPITVDNNLH 98

Query: 513 SQQIGVAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTG 692
           S  +G A GF+  + K  ++ +  FT  +   D+KGTI   G    +   R ++V+GGTG
Sbjct: 99  SPPVGRAQGFYFYDMKNTFSAWLGFTFVLNSTDYKGTITFGGADPILAKYRDISVVGGTG 158

Query: 693 DFLGA 707
           DFL A
Sbjct: 159 DFLMA 163


>tr|Q9SDR1|Q9SDR1_THUPL Dirigent-like protein OS=Thuja plicata
           GN=psd_Tp5 PE=2 SV=1
          Length = 190

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
 Frame = +3

Query: 345 SFTFYLHNTVYNPAVDNAXNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 512
           +   Y H+ +YN    NA N TS     P   N+T  T    FG  + F+DP+T      
Sbjct: 39  NLVLYFHDIIYNGK--NAENATSALVAAPEGANLTIMTGNNHFGNLAVFDDPITLDNNLH 96

Query: 513 SQQIGVAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTG 692
           S  +G A GF+  + K  ++ +  FT  +   DHKGTI   G    +   R ++V+GGTG
Sbjct: 97  SPPVGRAQGFYFYDMKNTFSAWLGFTFVLNSTDHKGTITFNGADPILTKYRDISVVGGTG 156

Query: 693 DFLGA 707
           DFL A
Sbjct: 157 DFLMA 161


>tr|Q9SDR0|Q9SDR0_THUPL Dirigent-like protein OS=Thuja plicata
           GN=psd_Tp6 PE=2 SV=1
          Length = 190

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
 Frame = +3

Query: 345 SFTFYLHNTVYNPAVDNAXNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 512
           +   Y H+ +YN    NA N TS     P   N+T  T    FG  + F+DP+T      
Sbjct: 39  NLVLYFHDIIYNGK--NAENATSALVAAPEGANLTIMTGNNHFGNLAVFDDPITLDNNLH 96

Query: 513 SQQIGVAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTG 692
           S  +G A GF+  + K  ++ +  FT  +   DHKGTI   G    +   R ++V+GGTG
Sbjct: 97  SPPVGRAQGFYFYDMKNTFSAWLGFTFVLNSTDHKGTITFNGADPILTKYRDISVVGGTG 156

Query: 693 DFLGA 707
           DFL A
Sbjct: 157 DFLMA 161


>tr|Q9SDR5|Q9SDR5_THUPL Dirigent-like protein OS=Thuja plicata
           GN=psd_Tp1 PE=2 SV=1
          Length = 189

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
 Frame = +3

Query: 345 SFTFYLHNTVYNPAVDNAXNFTSVYGVQPN----VTWTNTYAFGTTSTFEDPLTSGPATD 512
           +   Y H+ +YN    N  N T+     P      T+   + FG    F+DP+T      
Sbjct: 38  NLVLYFHDILYNGK--NIHNATAALVAAPAWGNLTTFAEPFKFGDVVVFDDPITLDNNLH 95

Query: 513 SQQIGVAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTG 692
           S  +G A GF+  N K  Y  +  FT  +   D+KGTI   G    +   R ++V+GGTG
Sbjct: 96  SPPVGRAQGFYLYNMKTTYNAWLGFTFVLNSTDYKGTITFNGADPPLVKYRDISVVGGTG 155

Query: 693 DFLGA 707
           DFL A
Sbjct: 156 DFLMA 160