DK948983
Clone id TST38A01NGRL0004_M09
Library
Length 657
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_M09. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
AGAGGGAGGGCGAGAGGCGGGGACACAGAGAGAGAGAGAAGAGAAGGAGGAGAAGAAGTA
GAAGAAGAGGAAAGAAGAGAAATTTTAACGTCCTAGAAACAGTCTCAATAGACAGATGGC
GATGGCGCATTCTTTGGGAGTGTTATCAGCATCGGCTACAAGGCCTCACAACGCTTTGAG
CCACAACACTCATTCGGAGTTGGCCTCTCTTAAGTTCTCCCCTCTCCTCTCTCTTTCCGC
CAGGTCCCGCTCTTCCTGTAAACGGCCTTTCTGCTTGACCAAAACTGTGCGATCGCAAGA
TGAGGCAGAACAGATGAAGGAAATGGCTGCCGCCGAGAAACGTTGGCGTGCTCAAGTACG
GGAGGGAAAAATACAATCCATTTCACCAAAGCAAGCAGGCTATGCTGCACAACTCTCTGA
TTACCGTATTCTTGATGTGCGACCATCCACAGAGAGAAACAAGGCTTGGGTCAAAGAATC
AATATGGATTCCACTTTTCGATGTTGACAATGGACTTGGACCAGAGACTATATTGAAGAA
GTTTTCAAATTTCACCATGGGAGGATGGTGGAGTGGTGCTCCTTTGATGAAATTTAACAA
CCAGTTTCTGCCTCAGGCAACTGAAAAAATATCTTTAGACTCCAAAGTCATTGTTTT
■■Homology search results ■■ -
sp_hit_id P25908
Definition sp|P25908|YPSL_SYNEN Uncharacterized 16.5 kDa protein in psaL 5'region OS=Synechococcus elongatus naegeli
Align length 38
Score (bit) 32.0
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948983|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_M09, 5'
(657 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P25908|YPSL_SYNEN Uncharacterized 16.5 kDa protein in psaL 5'... 32 2.9

>sp|P25908|YPSL_SYNEN Uncharacterized 16.5 kDa protein in psaL
5'region OS=Synechococcus elongatus naegeli PE=4 SV=1
Length = 150

Score = 32.0 bits (71), Expect = 2.9
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2

Query: 419 DYRILDVRPSTERNKAWVKESIWIPLFDVDNGLGPETI 532
DY ++DVR E A + S+ +PL +++NG G E I
Sbjct: 22 DYVLVDVRNPNEYEIARIPGSVLVPLSEIENGPGVEKI 59


tr_hit_id A9RKM5
Definition tr|A9RKM5|A9RKM5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 105
Score (bit) 132.0
E-value 2.0e-29
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK948983|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_M09, 5'
(657 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RKM5|A9RKM5_PHYPA Predicted protein OS=Physcomitrella paten... 132 2e-29
tr|Q501G8|Q501G8_ARATH At4g24750 OS=Arabidopsis thaliana PE=2 SV=1 128 4e-28
tr|Q0WWT7|Q0WWT7_ARATH Putative uncharacterized protein At4g2475... 128 4e-28
tr|A7PCP1|A7PCP1_VITVI Chromosome chr17 scaffold_12, whole genom... 126 1e-27
tr|Q6ZI49|Q6ZI49_ORYSJ Os02g0596000 protein OS=Oryza sativa subs... 119 2e-25
tr|B8AER2|B8AER2_ORYSI Putative uncharacterized protein OS=Oryza... 119 2e-25
tr|Q9SB69|Q9SB69_ARATH Putative uncharacterized protein AT4g2475... 115 3e-24
tr|A9T240|A9T240_PHYPA Predicted protein (Fragment) OS=Physcomit... 113 1e-23
tr|A3A8M6|A3A8M6_ORYSJ Putative uncharacterized protein OS=Oryza... 91 6e-17
tr|B4G1T0|B4G1T0_MAIZE Putative uncharacterized protein OS=Zea m... 72 2e-11
tr|Q9SR92|Q9SR92_ARATH T16O11.14 protein (Putative rhodanese fam... 71 7e-11
tr|Q8RY72|Q8RY72_ARATH Putative rhodanese family protein (Fragme... 71 7e-11
tr|Q8LBR6|Q8LBR6_ARATH Rhodanese-like family protein OS=Arabidop... 71 7e-11
tr|Q10MY4|Q10MY4_ORYSJ Os03g0289400 protein OS=Oryza sativa subs... 68 4e-10
tr|A9TJL4|A9TJL4_PHYPA Predicted protein OS=Physcomitrella paten... 67 1e-09
tr|A7QHR3|A7QHR3_VITVI Chromosome chr8 scaffold_99, whole genome... 62 4e-08
tr|A5B641|A5B641_VITVI Putative uncharacterized protein OS=Vitis... 60 9e-08
tr|A2XFF7|A2XFF7_ORYSI Putative uncharacterized protein OS=Oryza... 58 4e-07
tr|A9NS64|A9NS64_PICSI Putative uncharacterized protein OS=Picea... 56 2e-06
tr|A7KNZ8|A7KNZ8_GOSBA Rhodanese-like family protein-like protei... 56 2e-06
tr|A9SZ80|A9SZ80_PHYPA Predicted protein (Fragment) OS=Physcomit... 55 5e-06
tr|Q6H444|Q6H444_ORYSJ Os09g0279400 protein OS=Oryza sativa subs... 50 9e-05
tr|A3BWU3|A3BWU3_ORYSJ Putative uncharacterized protein OS=Oryza... 50 9e-05
tr|B6SNU6|B6SNU6_MAIZE Rhodanese family protein OS=Zea mays PE=2... 50 1e-04
tr|A2YZA3|A2YZA3_ORYSI Putative uncharacterized protein OS=Oryza... 50 1e-04
tr|Q94AY4|Q94AY4_ARATH At2g42220/T24P15.13 (Fragment) OS=Arabido... 49 2e-04
tr|O48529|O48529_ARATH Rhodanese-like family protein OS=Arabidop... 49 2e-04
tr|A7PVU0|A7PVU0_VITVI Chromosome chr8 scaffold_34, whole genome... 47 0.001
tr|B7FN62|B7FN62_MEDTR Putative uncharacterized protein OS=Medic... 43 0.019
tr|A2Q4U4|A2Q4U4_MEDTR Rhodanese-like OS=Medicago truncatula GN=... 43 0.019

>tr|A9RKM5|A9RKM5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_175931 PE=4 SV=1
Length = 302

Score = 132 bits (332), Expect = 2e-29
Identities = 57/105 (54%), Positives = 78/105 (74%)
Frame = +2

Query: 341 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 520
RW QV+EGK++ +S K+AGYA QL+DY LDVRPS E ++ VK+SI IP++DVD +
Sbjct: 89 RWEQQVKEGKVKQLSAKEAGYAMQLNDYTFLDVRPSNEHSRVSVKDSIHIPIYDVDQSVD 148

Query: 521 PETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIV 655
P ++ KKFSNFTMGGWW+G P+MK+N +F+P KI + +IV
Sbjct: 149 PASLSKKFSNFTMGGWWNGLPVMKYNERFMPDVVAKIPKTANIIV 193


>tr|Q501G8|Q501G8_ARATH At4g24750 OS=Arabidopsis thaliana PE=2 SV=1
Length = 266

Score = 128 bits (321), Expect = 4e-28
Identities = 56/105 (53%), Positives = 77/105 (73%)
Frame = +2

Query: 341 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 520
RW +REGK++ ++P++AGYA LS+ +LDVRPS+ERNKAW+K S W+P+FD D+ L
Sbjct: 52 RWDGLLREGKVKLLTPREAGYAISLSNKPLLDVRPSSERNKAWIKGSTWVPIFDNDDNLD 111

Query: 521 PETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIV 655
T+ KK ++F MGGWWSGAP + FN FL + EK DS++IV
Sbjct: 112 AGTLSKKVTSFAMGGWWSGAPTLSFNRLFLSKVEEKFPKDSELIV 156


>tr|Q0WWT7|Q0WWT7_ARATH Putative uncharacterized protein At4g24750
(At4g24750) OS=Arabidopsis thaliana GN=At4g24750 PE=2
SV=1
Length = 292

Score = 128 bits (321), Expect = 4e-28
Identities = 56/105 (53%), Positives = 77/105 (73%)
Frame = +2

Query: 341 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 520
RW +REGK++ ++P++AGYA LS+ +LDVRPS+ERNKAW+K S W+P+FD D+ L
Sbjct: 78 RWDGLLREGKVKLLTPREAGYAISLSNKPLLDVRPSSERNKAWIKGSTWVPIFDNDDNLD 137

Query: 521 PETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIV 655
T+ KK ++F MGGWWSGAP + FN FL + EK DS++IV
Sbjct: 138 AGTLSKKVTSFAMGGWWSGAPTLSFNRLFLSKVEEKFPKDSELIV 182


>tr|A7PCP1|A7PCP1_VITVI Chromosome chr17 scaffold_12, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00015945001
PE=4 SV=1
Length = 286

Score = 126 bits (316), Expect = 1e-27
Identities = 55/105 (52%), Positives = 77/105 (73%)
Frame = +2

Query: 341 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 520
RW A +RE K++ +SP++AGYA QLS+ +LDVRPSTER KAWVK S WIP+F+VD+
Sbjct: 72 RWEALIREEKVKILSPREAGYAIQLSNKTLLDVRPSTERKKAWVKGSTWIPIFEVDDRFD 131

Query: 521 PETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIV 655
T+ +K +NF MGGWWSG P + +++QFL + +K D+ +IV
Sbjct: 132 VGTLSRKITNFMMGGWWSGVPALSYDSQFLTKVEQKFPKDTDLIV 176


>tr|Q6ZI49|Q6ZI49_ORYSJ Os02g0596000 protein OS=Oryza sativa subsp.
japonica GN=OJ1126_D09.34 PE=2 SV=1
Length = 292

Score = 119 bits (298), Expect = 2e-25
Identities = 54/105 (51%), Positives = 71/105 (67%)
Frame = +2

Query: 341 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 520
RW +RE KI++++P++AGY +L+D +LDVRPS ER KAWVK S WIP+FDVD
Sbjct: 78 RWETLIREQKIKTLTPREAGYTFKLTDKVLLDVRPSNERQKAWVKGSTWIPVFDVDTSFD 137

Query: 521 PETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIV 655
KKF+N+ MGGWWSG+ M N F+ Q EK S D+ +IV
Sbjct: 138 LGGAGKKFTNYVMGGWWSGSSTMTVNKNFVQQVEEKFSKDTDIIV 182


>tr|B8AER2|B8AER2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_07903 PE=4 SV=1
Length = 292

Score = 119 bits (298), Expect = 2e-25
Identities = 54/105 (51%), Positives = 71/105 (67%)
Frame = +2

Query: 341 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 520
RW +RE KI++++P++AGY +L+D +LDVRPS ER KAWVK S WIP+FDVD
Sbjct: 78 RWETLIREQKIKTLTPREAGYTFKLTDKVLLDVRPSNERQKAWVKGSTWIPVFDVDTSFD 137

Query: 521 PETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIV 655
KKF+N+ MGGWWSG+ M N F+ Q EK S D+ +IV
Sbjct: 138 LGGAGKKFTNYVMGGWWSGSSTMTVNKNFVQQVEEKFSKDTDIIV 182


>tr|Q9SB69|Q9SB69_ARATH Putative uncharacterized protein AT4g24750
OS=Arabidopsis thaliana GN=F22K18.50 PE=2 SV=1
Length = 260

Score = 115 bits (287), Expect = 3e-24
Identities = 48/86 (55%), Positives = 66/86 (76%)
Frame = +2

Query: 341 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 520
RW +REGK++ ++P++AGYA LS+ +LDVRPS+ERNKAW+K S W+P+FD D+ L
Sbjct: 78 RWDGLLREGKVKLLTPREAGYAISLSNKPLLDVRPSSERNKAWIKGSTWVPIFDNDDNLD 137

Query: 521 PETILKKFSNFTMGGWWSGAPLMKFN 598
T+ KK ++F MGGWWSGAP + FN
Sbjct: 138 AGTLSKKVTSFAMGGWWSGAPTLSFN 163


>tr|A9T240|A9T240_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_139049 PE=4 SV=1
Length = 209

Score = 113 bits (282), Expect = 1e-23
Identities = 50/100 (50%), Positives = 69/100 (69%)
Frame = +2

Query: 356 VREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLGPETIL 535
V++G+++S+SPK+AG+A + +Y LDVRPS ER KA VK S WIP++DV+ P T+
Sbjct: 1 VKDGRVKSMSPKEAGFAVKSGEYTFLDVRPSNERAKASVKNSTWIPMYDVNKHGDPGTLY 60

Query: 536 KKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIV 655
KK N MGGWWSG LMK+N +F+P I +KV+V
Sbjct: 61 KKVQNLAMGGWWSGQALMKYNERFMPDVVATIPKSAKVVV 100


>tr|A3A8M6|A3A8M6_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_007148 PE=4 SV=1
Length = 267

Score = 90.9 bits (224), Expect = 6e-17
Identities = 46/105 (43%), Positives = 63/105 (60%)
Frame = +2

Query: 341 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 520
RW +RE KI++++P++AGY +L+D +LDVRPS ER KAWVK S WIP+FDVD
Sbjct: 78 RWETLIREQKIKTLTPREAGYTFKLTDKVLLDVRPSNERQKAWVKGSTWIPVFDVDTSFD 137

Query: 521 PETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIV 655
KKF+N+ M + F+ Q EK S D+ +IV
Sbjct: 138 LGGAGKKFTNYVMD---------QIARNFVQQVEEKFSKDTDIIV 173


>tr|B4G1T0|B4G1T0_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 253

Score = 72.4 bits (176), Expect = 2e-11
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = +2

Query: 464 AWVKESIWIPLFDVDNGLGPETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDS 643
AWVK S WIP+FDVD + + KK SNF MGGWWSG+ + N F+ Q EK S D+
Sbjct: 80 AWVKGSTWIPIFDVDASVDLGGLSKKVSNFVMGGWWSGSSTLSLNKNFVQQVEEKFSKDT 139

Query: 644 KVIV 655
+++
Sbjct: 140 DIML 143