DK949010 |
Clone id |
TST38A01NGRL0004_N13 |
Library |
TST38 |
Length |
685 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_N13. 5' end sequence. |
Accession |
DK949010 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL42Contig1 |
Sequence |
CGAGCTACCGTAATTCGGTCTTGTAGATCACTACAGAATTTCCGTATCGACGCGAGGTTT TGGGACACAGCAGATCTCTCTCGTTCTACTTCAGATCTGTGTCCAGGAGCTAAGCGAGCT CAGGATTGATGGAGAATATTTATTCTTTCTGGAGTCTAAATGACAATAATCGGCGCTCTC CCACTGAGATGCAAGAGGATCAAAGCTGGAAAGTAGCAGCTACCAAGCTTGCTTTTGCGG ATCAGATGAGGCTGAAGTTTGATAGGTCTAGATCTGATGCGAAGGTTGTGGCCCCTCATG AGAAGAACATTAAACAAGCAAAGGGACGATCCAAGGGCAGAGCTGAAGACATGCTGAAGG GGGAAGGTTTCAACCAGAAGTTTTCGGATGGGGATTTGAGATATGGAGATTTGGGTCAGA AGCTTGGAGCAGGTAACATGTCAACATCACAGATTGTTGGCAGTGCAGATAAACGATTCA AGTCTCTTCCGCCTGCTGAAACACTTCCTAGACACGAAACTTTGGGTGGCTACATATTTG TCTGCAACAATGATACCATGGCTGAGGACTTGAAGCGGCAATTATTTGGTTTGCCCCAAA GGTATCGTGATTCTGTGCGAGCCATTCAACCCGGATTGCCCTTGTTTTTGTATAATTATA CCACTCATCAGCTCCATGGTGTTTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P37707 |
Definition |
sp|P37707|B2_DAUCA B2 protein OS=Daucus carota |
Align length |
85 |
Score (bit) |
139.0 |
E-value |
1.0e-32 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQZ7 |
Definition |
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
206 |
Score (bit) |
172.0 |
E-value |
1.0e-41 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949010|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_N13, 5' (685 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea... 172 1e-41 tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea... 159 2e-37 tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medic... 156 1e-36 tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citru... 154 5e-36 tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solan... 152 3e-35 tr|Q9LSC7|Q9LSC7_ARATH Similarity to unknown protein (AT3g27090/... 147 8e-34 tr|Q8LBT1|Q8LBT1_ARATH Gda-1, putative OS=Arabidopsis thaliana P... 147 8e-34 tr|A9RF70|A9RF70_PHYPA Predicted protein OS=Physcomitrella paten... 145 2e-33 tr|A9T5I7|A9T5I7_PHYPA Predicted protein OS=Physcomitrella paten... 145 3e-33 tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 142 2e-32 tr|B8A073|B8A073_MAIZE Putative uncharacterized protein OS=Zea m... 141 4e-32 tr|A9REG4|A9REG4_PHYPA Predicted protein OS=Physcomitrella paten... 140 6e-32 tr|Q8L6E9|Q8L6E9_PEA GDA2 protein OS=Pisum sativum GN=gda2 PE=2 ... 139 1e-31 tr|A9PHN9|A9PHN9_POPTR Putative uncharacterized protein OS=Popul... 139 2e-31 tr|B4FUR5|B4FUR5_MAIZE Putative uncharacterized protein OS=Zea m... 138 3e-31 tr|B6TDG4|B6TDG4_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 137 5e-31 tr|Q9FHX9|Q9FHX9_ARATH Arabidopsis thaliana genomic DNA, chromos... 137 6e-31 tr|Q8RXN8|Q8RXN8_ARATH Putative uncharacterized protein At5g4205... 137 6e-31 tr|Q6L4U7|Q6L4U7_ORYSJ Os05g0498700 protein OS=Oryza sativa subs... 137 8e-31 tr|B8AZL0|B8AZL0_ORYSI Putative uncharacterized protein OS=Oryza... 137 8e-31 tr|A3B5I3|A3B5I3_ORYSJ Putative uncharacterized protein OS=Oryza... 137 8e-31 tr|Q5JK83|Q5JK83_ORYSJ cDNA clone:001-207-H09, full insert seque... 132 2e-29 tr|Q5JK82|Q5JK82_ORYSJ Putative GDA2 protein (Os01g0550300 prote... 132 2e-29 tr|B8AA12|B8AA12_ORYSI Putative uncharacterized protein OS=Oryza... 132 2e-29 tr|A2ZU93|A2ZU93_ORYSJ Putative uncharacterized protein OS=Oryza... 132 2e-29 tr|Q5JZR1|Q5JZR1_SOYBN N-rich protein OS=Glycine max GN=nrp PE=2... 132 2e-29 tr|A7Q7R8|A7Q7R8_VITVI Chromosome chr18 scaffold_61, whole genom... 129 2e-28 tr|A5AK97|A5AK97_VITVI Putative uncharacterized protein OS=Vitis... 129 2e-28 tr|B6TMX1|B6TMX1_MAIZE N-rich protein OS=Zea mays PE=2 SV=1 128 3e-28 tr|B7ZZ36|B7ZZ36_MAIZE Putative uncharacterized protein OS=Zea m... 127 5e-28
>tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 282
Score = 172 bits (437), Expect = 1e-41 Identities = 100/206 (48%), Positives = 120/206 (58%), Gaps = 21/206 (10%) Frame = +3
Query: 129 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 308 M N YSFW + R +D W +AA++LA A+ R K DR+ +P E Sbjct: 1 MANPYSFWQFGEE-LRGQARASDDHKWTLAASQLALAEHKRSKGDRTNRSEPTESPSEA- 58
Query: 309 IKQAKGRSKGRAE-DMLKGEGFNQKFSDGDLRYGDLGQKLGA------------------ 431 + KG+ KG++E L+ N K + D + GD G K GA Sbjct: 59 --KQKGKYKGKSEVSKLEALTLNLKQMNLDWKPGDAGVKGGALNDIYNASTPYHNNNSGN 116
Query: 432 --GNMSTSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAEDLKRQLFGLPQRY 605 N + S + DKRFK+LP E LPR+E LGGYIFVCNNDTM EDLKRQLFGLPQRY Sbjct: 117 NNNNNNGSNNNNAYDKRFKTLPSTEMLPRNEILGGYIFVCNNDTMQEDLKRQLFGLPQRY 176
Query: 606 RDSVRAIQPGLPLFLYNYTTHQLHGV 683 RDSVRAI PGLPLFLYNYTTHQLHG+ Sbjct: 177 RDSVRAITPGLPLFLYNYTTHQLHGI 202
>tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 273
Score = 159 bits (401), Expect = 2e-37 Identities = 96/198 (48%), Positives = 124/198 (62%), Gaps = 14/198 (7%) Frame = +3
Query: 129 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 308 M + ++FW L ++ R +E DQ+W +AA+KLA +Q R K DR S + E Sbjct: 1 MVDSFAFWQLGESLRGLSSE---DQNWTLAASKLATFEQTRGKSDRINSLEPKTSYAE-- 55
Query: 309 IKQAKGRSKGRAEDMLKGEGFNQ--KFSDGDLRYG------DLGQKLGAGNMSTSQIVG- 461 +K G+S G+ E++ + FN K ++ + G ++ + N +TS Sbjct: 56 VKHRGGKSNGKLEEVNDNQ-FNLIWKPAEAGTKVGIVHGGYNINHVINYNNNNTSSNGNN 114
Query: 462 -----SADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAEDLKRQLFGLPQRYRDSVRAI 626 S +KRFK+LP +E LPR+E LGGYIFVCNNDTM EDLKRQLFGLPQRYRDSVRAI Sbjct: 115 NYNNNSFEKRFKTLPSSEMLPRNEILGGYIFVCNNDTMQEDLKRQLFGLPQRYRDSVRAI 174
Query: 627 QPGLPLFLYNYTTHQLHG 680 PGLPLFLYNYTTHQLHG Sbjct: 175 TPGLPLFLYNYTTHQLHG 192
>tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 302
Score = 156 bits (394), Expect = 1e-36 Identities = 100/224 (44%), Positives = 120/224 (53%), Gaps = 39/224 (17%) Frame = +3
Query: 129 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 308 M+N++SFW L D R ++ ED W + A+KLA + R K +R + P E Sbjct: 1 MDNMHSFWQLGDE-LRGHSKASEDHKWLMVASKLA---EQRSKAERFNNLDLSKGPLETR 56
Query: 309 IKQAKGRSKGRAEDMLK------GEGFNQKFSDGDLRYGDLG-----QKLG---AGNMST 446 + G + D L F + S LR G QK AGNM++ Sbjct: 57 PRDKFGFQEENKFDTLNLSMLNLDSKFTENMSKSSLRNGVYNMNAVYQKSNVNFAGNMNS 116
Query: 447 SQIVGSA-------------------------DKRFKSLPPAETLPRHETLGGYIFVCNN 551 ++ G+ DKRFK+LP AETLPR+E LGGYIFVCNN Sbjct: 117 NKYSGNVQLNKDPHNNNSNNNNNNNENNSNATDKRFKTLPAAETLPRNEVLGGYIFVCNN 176
Query: 552 DTMAEDLKRQLFGLPQRYRDSVRAIQPGLPLFLYNYTTHQLHGV 683 DTM EDLKRQLFGLP RYRDSVRAI PGLPLFLYNYTTHQLHGV Sbjct: 177 DTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGV 220
>tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citrus paradisi PE=2 SV=1 Length = 305
Score = 154 bits (389), Expect = 5e-36 Identities = 102/237 (43%), Positives = 123/237 (51%), Gaps = 52/237 (21%) Frame = +3
Query: 129 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 308 M+N++SFW L D R + EDQSW AA++LA +Q R K +R N Sbjct: 1 MDNMHSFWQLGDE-LRGQSRTSEDQSWLRAASRLA--EQTRFKGERMN-----------N 46
Query: 309 IKQAKGRSKGRAEDML------KGEGFNQKFS-------------DGDLRYG-------- 407 + +KG ++ R D + E FN F+ LR G Sbjct: 47 LDLSKGMTEIRPRDKIMYHEDNNFESFNFNFNMMNLDNKVVENVTKSSLRNGIYNMNAVY 106
Query: 408 ------DLGQ----KLGAGNMST---------------SQIVGSADKRFKSLPPAETLPR 512 ++G K G N+S S + DKRFK+LP ETLPR Sbjct: 107 QKNSGHNMGNLMVNKYGGNNLSVKEAENNNNNNNNNNDSNANSALDKRFKTLPATETLPR 166
Query: 513 HETLGGYIFVCNNDTMAEDLKRQLFGLPQRYRDSVRAIQPGLPLFLYNYTTHQLHGV 683 +E LGGYIFVCNNDTM EDLKRQLFGLP RYRDSVRAI PGLPLFLYNYTTHQLHG+ Sbjct: 167 NEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGI 223
>tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 298
Score = 152 bits (383), Expect = 3e-35 Identities = 94/222 (42%), Positives = 117/222 (52%), Gaps = 37/222 (16%) Frame = +3
Query: 129 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLA----FADQMRLKFDRSRSDAKVVAP 296 MEN+ S+W D R ++ ED W AA KL+ + + R D S+S A++ P Sbjct: 1 MENMQSYWQFGDE-LRGQSKASEDHKWSTAALKLSEQMKYKGERRNNLDLSKSSAEI-RP 58
Query: 297 HEKNI-------------------KQAKGRSKGRAEDMLK--------------GEGFNQ 377 ++ K + SK R D + G Sbjct: 59 RGNHMFQEDNKWESLNFNMLNLESKMTENMSKNRIMDSIYNANPVYLNPNFNSLGNSSLS 118
Query: 378 KFSDGDLRYGDLGQKLGAGNMSTSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDT 557 KF+ + Y K N+ ++ S DKRFK+LP AETLP++E LGGYIFVCNNDT Sbjct: 119 KFNASN--YTKEPSKNNNNNVESTNGNNSVDKRFKTLPAAETLPKNEVLGGYIFVCNNDT 176
Query: 558 MAEDLKRQLFGLPQRYRDSVRAIQPGLPLFLYNYTTHQLHGV 683 M EDLKR LFGLP RYRDSVRAI PGLPLFLYNYTTHQLHG+ Sbjct: 177 MQEDLKRLLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGI 218
>tr|Q9LSC7|Q9LSC7_ARATH Similarity to unknown protein (AT3g27090/MOJ10_18) OS=Arabidopsis thaliana GN=At3g27090 PE=2 SV=1 Length = 296
Score = 147 bits (370), Expect = 8e-34 Identities = 92/224 (41%), Positives = 113/224 (50%), Gaps = 44/224 (19%) Frame = +3
Query: 144 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRS-----------DAKVV 290 SFW L D R T ED W ATKLA +Q R+K +R + ++ Sbjct: 3 SFWQLGDE-LRGQTRASEDHKWSTVATKLA--EQTRMKGERMNNLDLSKGYTEFRPSEKF 59
Query: 291 APHEKNIKQAKGRSKGRAEDMLKGE--------GFNQKFSDGDLRYGDLGQKLGAGNMST 446 + E N+ G+ + + G+ N F D + G GNM Sbjct: 60 SFQENNLNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSG--------GNMKV 111
Query: 447 SQIVGSA-------------------------DKRFKSLPPAETLPRHETLGGYIFVCNN 551 ++ G+ DKRFK+LP +ETLPR+E LGGYIFVCNN Sbjct: 112 NKYNGNVVANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNN 171
Query: 552 DTMAEDLKRQLFGLPQRYRDSVRAIQPGLPLFLYNYTTHQLHGV 683 DTM ED+KR LFGLP RYRDSVRAI PGLPLFLYNYTTHQLHG+ Sbjct: 172 DTMQEDMKRHLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGI 215
>tr|Q8LBT1|Q8LBT1_ARATH Gda-1, putative OS=Arabidopsis thaliana PE=2 SV=1 Length = 296
Score = 147 bits (370), Expect = 8e-34 Identities = 92/224 (41%), Positives = 113/224 (50%), Gaps = 44/224 (19%) Frame = +3
Query: 144 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRS-----------DAKVV 290 SFW L D R T ED W ATKLA +Q R+K +R + ++ Sbjct: 3 SFWQLGDE-LRGQTRASEDHKWSTVATKLA--EQTRMKGERMNNLDLSKGYTEFRPSEKF 59
Query: 291 APHEKNIKQAKGRSKGRAEDMLKGE--------GFNQKFSDGDLRYGDLGQKLGAGNMST 446 + E N+ G+ + + G+ N F D + G GNM Sbjct: 60 SFQENNLNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSG--------GNMKV 111
Query: 447 SQIVGS-------------------------ADKRFKSLPPAETLPRHETLGGYIFVCNN 551 ++ G+ DKRFK+LP +ETLPR+E LGGYIFVCNN Sbjct: 112 NKYNGNIVANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNN 171
Query: 552 DTMAEDLKRQLFGLPQRYRDSVRAIQPGLPLFLYNYTTHQLHGV 683 DTM ED+KR LFGLP RYRDSVRAI PGLPLFLYNYTTHQLHG+ Sbjct: 172 DTMQEDMKRHLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGI 215
>tr|A9RF70|A9RF70_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113222 PE=4 SV=1 Length = 174
Score = 145 bits (366), Expect = 2e-33 Identities = 68/78 (87%), Positives = 71/78 (91%) Frame = +3
Query: 450 QIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAEDLKRQLFGLPQRYRDSVRAIQ 629 QI + DKRFKSLPPAE LPR+ TLGGYIFVCNNDTM EDLKRQLFGLPQRYRDSVR IQ Sbjct: 12 QITVNPDKRFKSLPPAEILPRNTTLGGYIFVCNNDTMQEDLKRQLFGLPQRYRDSVRTIQ 71
Query: 630 PGLPLFLYNYTTHQLHGV 683 PGLPLFLYNYTTHQLHG+ Sbjct: 72 PGLPLFLYNYTTHQLHGI 89
>tr|A9T5I7|A9T5I7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191832 PE=4 SV=1 Length = 177
Score = 145 bits (365), Expect = 3e-33 Identities = 71/94 (75%), Positives = 76/94 (80%), Gaps = 1/94 (1%) Frame = +3
Query: 405 GDLGQKLGAGNMSTS-QIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAEDLKRQ 581 G K G N +T Q+ S +KRFKSLP AE LPR+ TLGGYIFVCNNDTM EDLKRQ Sbjct: 3 GPTAPKTGVSNGNTQFQVTVSHEKRFKSLPSAEVLPRNVTLGGYIFVCNNDTMQEDLKRQ 62
Query: 582 LFGLPQRYRDSVRAIQPGLPLFLYNYTTHQLHGV 683 LFGLPQRYRDSVR IQPGLPLFLYNYTTHQLHG+ Sbjct: 63 LFGLPQRYRDSVRTIQPGLPLFLYNYTTHQLHGI 96
>tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 Length = 301
Score = 142 bits (358), Expect = 2e-32 Identities = 92/220 (41%), Positives = 113/220 (51%), Gaps = 40/220 (18%) Frame = +3
Query: 144 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAF-----ADQMRLKFDRSRSDAKVVAPHEKN 308 S W L D R P ++ ED+ W + +KLA ++M D + D H+ + Sbjct: 3 SLWHLGDELRGQP-KVVEDRQWSLMTSKLAEITRSKGERMNTVPDAKQWDKTSYQLHDDS 61
Query: 309 ---------------IKQA-------KGRSKGRAEDMLKGEGFNQKFSDGDLRYG----- 407 + +A +G + LKG N + + G Sbjct: 62 RMGHINLGLMNLDLKMNEAAAMKLPFRGMPYNMNQMYLKGSNANSNVNAFKMNVGVNKYS 121
Query: 408 ------DLGQKLGAGNMSTSQIVGS--ADKRFKSLPPAETLPRHETLGGYIFVCNNDTMA 563 D K GN + G+ ADKRFK+LP +E LPR+E LGGYIFVCNNDTM Sbjct: 122 NSPNGKDANGKNNGGNNNNGSANGTSVADKRFKTLPTSEMLPRNEVLGGYIFVCNNDTMQ 181
Query: 564 EDLKRQLFGLPQRYRDSVRAIQPGLPLFLYNYTTHQLHGV 683 EDLKRQLFGLP RYRDSVRAI PGLPLFLYNYTTHQLHGV Sbjct: 182 EDLKRQLFGLPARYRDSVRAITPGLPLFLYNYTTHQLHGV 221
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