DK949014 |
Clone id |
TST38A01NGRL0004_N17 |
Library |
TST38 |
Length |
658 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_N17. 5' end sequence. |
Accession |
DK949014 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL624Contig1 |
Sequence |
GGTGATCCAGATACTTTTGAAGCTTGCATGGAGGCAATGGCGTCCTCGTTAAAGCCGCCT GCCTGCTCGTTTGTGAAGGTTACTCGAAGATTAGAAAGCAGACAGAGCAAGCTCTATGCA AAATCATTATGGCATCAGCCTTTTGGTCTTCAGTCAAGGCCAAGCAGGATATGTTTACAG GTCGATTGCTCCGCAAGGGGCCTCGAAGAGGTGAAGCCACTTCAAGCTCCAAAGTTGCAG GACAAATTTGGCTCAGAGAATCTGCAATTTTCGGATGTTGCTGGTAGGACTGTGGCAGAG CTCAAACTGGCATCAGGTACCTCAGTACGCCTACTATTGGCAGAGGCACGGATCACATCT TACAGCTGCTGCCTTTGGCATGGTAGCTGCGAAGAAATGTTGTATACTGATGTGTCAGAA AGCTCCGTCAACGGCATTGATAGAAGTGTACATGGGGCTACTCCTCAGCAGTTTTTTGTA ACTGGTGGCATGGCTCCCTCTTTAGCTCACTCTCTTGATCCTCACATTAGCCTTTGCAAT AACAATTGGTCAGTACAGTCGGTGGCAGTCGATCCAAAGGAGCACGTTCAGGTGACTCTT AGGTGTGCCAATGAAAATCGAGATGACTATCACTTCAAGCTACATAACATTTTTACCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A7MV92 |
Definition |
sp|A7MV92|Y1411_VIBHB UPF0061 protein VIBHAR_01411 OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) |
Align length |
103 |
Score (bit) |
33.1 |
E-value |
1.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9C503 |
Definition |
tr|Q9C503|Q9C503_ARATH Putative uncharacterized protein F7A10.12 (Putative uncharacterized protein T18I3.2) OS=Arabidopsis thaliana |
Align length |
141 |
Score (bit) |
62.0 |
E-value |
3.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949014|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_N17, 5' (658 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9C503|Q9C503_ARATH Putative uncharacterized protein F7A10.12... 62 3e-08 tr|Q3ECP4|Q3ECP4_ARATH Uncharacterized protein At1g55370.1 (Puta... 62 3e-08 tr|Q8LBH1|Q8LBH1_ARATH Putative uncharacterized protein OS=Arabi... 62 4e-08 tr|A7PW58|A7PW58_VITVI Chromosome chr8 scaffold_34, whole genome... 55 3e-06 tr|A5AUH5|A5AUH5_VITVI Putative uncharacterized protein OS=Vitis... 55 3e-06 tr|Q9XIR6|Q9XIR6_ARATH F13O11.8 protein OS=Arabidopsis thaliana ... 53 1e-05 tr|Q94AQ8|Q94AQ8_ARATH Putative uncharacterized protein At1g6477... 53 1e-05 tr|Q8W307|Q8W307_ORYSA Putative antifreeze glycoprotein OS=Oryza... 47 8e-04 tr|Q10CW2|Q10CW2_ORYSJ Os03g0748300 protein OS=Oryza sativa subs... 47 8e-04 tr|A2XM00|A2XM00_ORYSI Putative uncharacterized protein OS=Oryza... 47 8e-04 tr|Q10RI6|Q10RI6_ORYSJ Os03g0158300 protein OS=Oryza sativa subs... 47 0.001 tr|B8ANU6|B8ANU6_ORYSI Putative uncharacterized protein OS=Oryza... 47 0.001 tr|A3AEA6|A3AEA6_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.009 tr|A9SKF3|A9SKF3_PHYPA Predicted protein OS=Physcomitrella paten... 44 0.012 tr|B4FJP7|B4FJP7_MAIZE Putative uncharacterized protein OS=Zea m... 43 0.015 tr|B4FWG2|B4FWG2_MAIZE Putative uncharacterized protein OS=Zea m... 43 0.020 tr|Q8H8C2|Q8H8C2_ORYSJ Putative uncharacterized protein OJ1134F0... 42 0.026 tr|A2Q5N9|A2Q5N9_MEDTR Galactose mutarotase-like OS=Medicago tru... 42 0.026 tr|B6U6C8|B6U6C8_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.044 tr|A7PW57|A7PW57_VITVI Chromosome chr8 scaffold_34, whole genome... 42 0.044 tr|A7SEF8|A7SEF8_NEMVE Predicted protein OS=Nematostella vectens... 35 4.1 tr|B3EB59|B3EB59_GEOLS Putative uncharacterized protein OS=Geoba... 34 7.0 tr|Q7XIK0|Q7XIK0_ORYSJ Putative peptidyl-prolycis-trans isomeras... 34 7.0 tr|Q7XIJ9|Q7XIJ9_ORYSJ Os07g0565600 protein OS=Oryza sativa subs... 34 7.0 tr|B8B7H0|B8B7H0_ORYSI Putative uncharacterized protein OS=Oryza... 34 7.0 tr|A5B7H4|A5B7H4_VITVI Putative uncharacterized protein OS=Vitis... 34 7.0 tr|Q2H5Q6|Q2H5Q6_CHAGB Putative uncharacterized protein OS=Chaet... 34 9.0 tr|A5BPH8|A5BPH8_VITVI Putative uncharacterized protein OS=Vitis... 34 9.1
>tr|Q9C503|Q9C503_ARATH Putative uncharacterized protein F7A10.12 (Putative uncharacterized protein T18I3.2) OS=Arabidopsis thaliana GN=T18I3.2 PE=4 SV=1 Length = 354
Score = 62.0 bits (149), Expect = 3e-08 Identities = 37/141 (26%), Positives = 66/141 (46%) Frame = +1
Query: 217 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCCLWHGSCEE 396 P+ L+ +F F D+ +A LKL +G+S ++L ITSY +WHG E Sbjct: 59 PIDVEYLRREFSGHGATFEDIGETCIARLKLDNGSSANVMLTRGMITSYKVRVWHGGKVE 118
Query: 397 MLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQSVAVDP 576 +L+T V + ++ + GG++ + S IS +W +Q ++ D Sbjct: 119 LLHTWVEQEE-------------EEVVIRGGVSSAFRSSDSDEIS----DWRLQGISGDS 161
Query: 577 KEHVQVTLRCANENRDDYHFK 639 K+ VQ+ LR +++ + K Sbjct: 162 KDCVQMELRRSDKKIKEIELK 182
>tr|Q3ECP4|Q3ECP4_ARATH Uncharacterized protein At1g55370.1 (Putative uncharacterized protein At1g55370) OS=Arabidopsis thaliana GN=At1g55370 PE=2 SV=1 Length = 308
Score = 62.0 bits (149), Expect = 3e-08 Identities = 37/141 (26%), Positives = 66/141 (46%) Frame = +1
Query: 217 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCCLWHGSCEE 396 P+ L+ +F F D+ +A LKL +G+S ++L ITSY +WHG E Sbjct: 59 PIDVEYLRREFSGHGATFEDIGETCIARLKLDNGSSANVMLTRGMITSYKVRVWHGGKVE 118
Query: 397 MLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQSVAVDP 576 +L+T V + ++ + GG++ + S IS +W +Q ++ D Sbjct: 119 LLHTWVEQEE-------------EEVVIRGGVSSAFRSSDSDEIS----DWRLQGISGDS 161
Query: 577 KEHVQVTLRCANENRDDYHFK 639 K+ VQ+ LR +++ + K Sbjct: 162 KDCVQMELRRSDKKIKEIELK 182
>tr|Q8LBH1|Q8LBH1_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 354
Score = 61.6 bits (148), Expect = 4e-08 Identities = 37/141 (26%), Positives = 65/141 (46%) Frame = +1
Query: 217 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCCLWHGSCEE 396 P+ L+ +F F D+ +A LKL G+S ++L ITSY +WHG E Sbjct: 59 PIDVEYLRREFSGHGATFEDIGETCIARLKLDDGSSANVMLTRGMITSYKVRVWHGGKVE 118
Query: 397 MLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQSVAVDP 576 +L+T V + ++ + GG++ + S IS +W +Q ++ D Sbjct: 119 LLHTWVEQEE-------------EEVVIRGGVSSAFRSSDSDEIS----DWRLQGISGDS 161
Query: 577 KEHVQVTLRCANENRDDYHFK 639 K+ VQ+ LR +++ + K Sbjct: 162 KDCVQMELRRSDKKIKEIELK 182
>tr|A7PW58|A7PW58_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025482001 PE=4 SV=1 Length = 349
Score = 55.5 bits (132), Expect = 3e-06 Identities = 33/128 (25%), Positives = 58/128 (45%) Frame = +1
Query: 217 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCCLWHGSCEE 396 P L+ +F + F + V ++ L +G+ L+L ITSY +WHG E Sbjct: 51 PANVDYLETQFSGHGVTFEGIGDSYVVKMGLENGSLASLMLPSGLITSYKAPMWHGGTLE 110
Query: 397 MLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQSVAVDP 576 +L+T V+E + + GG++ +L D IS ++W +Q V + Sbjct: 111 VLHTTVTEEDSGAV-------------IQGGVSLALECESDGGISWSPSSWILQDVRGNA 157
Query: 577 KEHVQVTL 600 +E +QV + Sbjct: 158 EELIQVEM 165
>tr|A5AUH5|A5AUH5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016184 PE=4 SV=1 Length = 754
Score = 55.5 bits (132), Expect = 3e-06 Identities = 33/128 (25%), Positives = 58/128 (45%) Frame = +1
Query: 217 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCCLWHGSCEE 396 P L+ +F + F + V ++ L +G+ L+L ITSY +WHG E Sbjct: 421 PANVDYLETQFSGHGVTFEGIGDSYVVKMGLENGSLASLMLPSGLITSYKAPMWHGGTLE 480
Query: 397 MLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQSVAVDP 576 +L+T V+E + + GG++ +L D IS ++W +Q V + Sbjct: 481 VLHTTVTEEDSGAV-------------IQGGVSLALECESDGGISWSPSSWILQDVRGNA 527
Query: 577 KEHVQVTL 600 +E +QV + Sbjct: 528 EELIQVEM 535
Score = 41.6 bits (96), Expect = 0.044 Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 4/134 (2%) Frame = +1
Query: 235 LQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCCL-W-HGSCEEMLYT 408 L KFG + ++F + + EL + +G+S+RL + + +TSY + W EE+LYT Sbjct: 84 LDQKFGRKGIKFLESGNVPLVELTVRNGSSLRLRIPDGLVTSYKPKVNWKDDGFEEVLYT 143
Query: 409 DVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDP--HISLCNNNWSVQSVAVDPKE 582 + A GG+ + DP +S + W+V+ V D + Sbjct: 144 -------------LPAAASDSTKPKGGIGLVINDVSDPASKLSPLSTEWAVKDVDSDAID 190
Query: 583 HVQVTLRCANENRD 624 +QV L C + D Sbjct: 191 ALQVELSCTSGTLD 204
>tr|Q9XIR6|Q9XIR6_ARATH F13O11.8 protein OS=Arabidopsis thaliana GN=F13O11.8 PE=4 SV=1 Length = 338
Score = 53.1 bits (126), Expect = 1e-05 Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 2/135 (1%) Frame = +1
Query: 208 EVKPLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCCLW--H 381 + + + KL+DKFG + ++FS+ + ELK+ +G+S++L L++A + SY ++ Sbjct: 24 QTQTINTEKLEDKFGRKGIKFSESNNIPMVELKVRNGSSLKLSLSDAHVLSYKPKVYWKD 83
Query: 382 GSCEEMLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQS 561 EE+LYT + S G+ + G P S+ IS C +WSV+ Sbjct: 84 EGFEEVLYTVDGDESRGGVG----------VVIVNGEEPKGGSSV---ISGC--DWSVKD 128
Query: 562 VAVDPKEHVQVTLRC 606 D + +Q+ L C Sbjct: 129 TDSDAIDALQIELSC 143
>tr|Q94AQ8|Q94AQ8_ARATH Putative uncharacterized protein At1g64770 (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At1g64770 PE=2 SV=1 Length = 348
Score = 53.1 bits (126), Expect = 1e-05 Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 2/135 (1%) Frame = +1
Query: 208 EVKPLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCCLW--H 381 + + + KL+DKFG + ++FS+ + ELK+ +G+S++L L++A + SY ++ Sbjct: 24 QTQTINTEKLEDKFGRKGIKFSESNNIPMVELKVRNGSSLKLSLSDAHVLSYKPKVYWKD 83
Query: 382 GSCEEMLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQS 561 EE+LYT + S G+ + G P S+ IS C +WSV+ Sbjct: 84 EGFEEVLYTVDGDESRGGVG----------VVIVNGEEPKGGSSV---ISGC--DWSVKD 128
Query: 562 VAVDPKEHVQVTLRC 606 D + +Q+ L C Sbjct: 129 TDSDAIDALQIELSC 143
>tr|Q8W307|Q8W307_ORYSA Putative antifreeze glycoprotein OS=Oryza sativa GN=OSJNBa0069E14.14 PE=4 SV=1 Length = 411
Score = 47.4 bits (111), Expect = 8e-04 Identities = 34/131 (25%), Positives = 58/131 (44%) Frame = +1
Query: 217 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCCLWHGSCEE 396 P L +F + F V G +++L +G++ +LL +TSY +WHG+ E Sbjct: 75 PPNVDYLAAEFAGHGVSFEAVGGSCAVKMELRNGSAAHVLLPGGLVTSYKPAMWHGAPTE 134
Query: 397 MLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQSVAVDP 576 +++T V+E + G R+V GG A + P + WS++ V P Sbjct: 135 VIHTTVAE-GLGG--RAVIRGGVSLDLRCGGAAGGGGDGMPPWSP--SGAWSLRDVRGSP 189
Query: 577 KEHVQVTLRCA 609 ++V L A Sbjct: 190 TGSIEVELASA 200
>tr|Q10CW2|Q10CW2_ORYSJ Os03g0748300 protein OS=Oryza sativa subsp. japonica GN=Os03g0748300 PE=2 SV=1 Length = 411
Score = 47.4 bits (111), Expect = 8e-04 Identities = 34/131 (25%), Positives = 58/131 (44%) Frame = +1
Query: 217 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCCLWHGSCEE 396 P L +F + F V G +++L +G++ +LL +TSY +WHG+ E Sbjct: 75 PPNVDYLAAEFAGHGVSFEAVGGSCAVKMELRNGSAAHVLLPGGLVTSYKPAMWHGAPTE 134
Query: 397 MLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQSVAVDP 576 +++T V+E + G R+V GG A + P + WS++ V P Sbjct: 135 VIHTTVAE-GLGG--RAVIRGGVSLDLRCGGAAGGGGDGMPPWSP--SGAWSLRDVRGSP 189
Query: 577 KEHVQVTLRCA 609 ++V L A Sbjct: 190 TGSIEVELASA 200
>tr|A2XM00|A2XM00_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13506 PE=4 SV=1 Length = 411
Score = 47.4 bits (111), Expect = 8e-04 Identities = 34/131 (25%), Positives = 58/131 (44%) Frame = +1
Query: 217 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCCLWHGSCEE 396 P L +F + F V G +++L +G++ +LL +TSY +WHG+ E Sbjct: 75 PPNVDYLAAEFAGHGVSFEAVGGSCAVKMELRNGSAAHVLLPGGLVTSYKPAMWHGAPTE 134
Query: 397 MLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQSVAVDP 576 +++T V+E + G R+V GG A + P + WS++ V P Sbjct: 135 VIHTTVAE-GLGG--RAVIRGGVSLDLRCGGAAGGGGDGMPPWSP--SGAWSLRDVRGSP 189
Query: 577 KEHVQVTLRCA 609 ++V L A Sbjct: 190 TGSIEVELASA 200
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