DK949030 |
Clone id |
TST38A01NGRL0004_O10 |
Library |
TST38 |
Length |
792 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_O10. 5' end sequence. |
Accession |
DK949030 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL643Contig1 |
Sequence |
CGTAAGACAGCAGTTGCCCGTGTTTGCTTGCTCGAGGGCACTGGAAAAGTCATTATTAAC TATCGCACTGCACAGGATTATCTTCAAGGCAACCCTTTGTGGCTTCAATACGTCAAGTAC CCTCTTGTCAGTCTGGGGTATGAGACCAAGTATGATGTCATTGTGAAGGCAGAAGGTGGT GGTCTTTCTGGTCAAGCGCAGGCAATCCTGCTCGGAATTGCTCGTGCCCTCTGTGTTGCC AACCCAGCTAACAGAGATCCTTTGAAGAAGCAGGGTCTATTGAGGCGAGATCCGAGAAGT GTGGAGCGTAAGAAAGCAGGTCTGCACAAAGCTCGCAAGGCTCCACAATACTCCAAGCGT TGAGAGGATATGCAATGTGCAATGCTTTTGACACAAGCTCTAGTAAGTAATGAATGCTCT TGTTCTTACGTGGCTTGTGCATCGGTGTTTAGAGCCGACTGTGGTGTGAAGCTGGTGGTG TTTGGTACCATAGCCAAGCAAAATGTTAAGGGATACTGTTGGAGCAATATGTAACAGGAA TAGAAATATGATTGAAAGGGAACAATCATAGCTGAGCTTATTGAGTTTGGAAGCACTTCC AAGCTACATGTGTCTGAAATTTCATGTTAATTTTGGCATTACTCACCCATATCAGGTGGA GTTAGATTATGACTCTTGTTGTAAACAAAGGAAGGTAGTGCTTTTAATTTGAGCTGCTAT TTGAAGTTTTTTGCATCAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9XJ27 |
Definition |
sp|Q9XJ27|RR9_ARATH 30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana |
Align length |
120 |
Score (bit) |
180.0 |
E-value |
8.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949030|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_O10, 5' (737 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9XJ27|RR9_ARATH 30S ribosomal protein S9, chloroplastic OS=A... 180 8e-45 sp|P82278|RR9_SPIOL 30S ribosomal protein S9, chloroplastic (Fra... 175 3e-43 sp|Q2JL70|RS9_SYNJB 30S ribosomal protein S9 OS=Synechococcus sp... 150 7e-36 sp|Q2JUJ9|RS9_SYNJA 30S ribosomal protein S9 OS=Synechococcus sp... 150 7e-36 sp|Q3MF93|RS9_ANAVT 30S ribosomal protein S9 OS=Anabaena variabi... 147 4e-35 sp|Q8YPK7|RS9_ANASP 30S ribosomal protein S9 OS=Anabaena sp. (st... 147 4e-35 sp|Q8DMK7|RS9_THEEB 30S ribosomal protein S9 OS=Thermosynechococ... 146 1e-34 sp|B0JY34|RS9_MICAN 30S ribosomal protein S9 OS=Microcystis aeru... 146 1e-34 sp|Q9MUV1|RR9_MESVI 30S ribosomal protein S9, chloroplastic OS=M... 140 9e-33 sp|Q318L1|RS9_PROM9 30S ribosomal protein S9 OS=Prochlorococcus ... 138 3e-32 sp|A8G735|RS9_PROM2 30S ribosomal protein S9 OS=Prochlorococcus ... 138 3e-32 sp|B0C426|RS9_ACAM1 30S ribosomal protein S9 OS=Acaryochloris ma... 138 3e-32 sp|P73293|RS9_SYNY3 30S ribosomal protein S9 OS=Synechocystis sp... 137 5e-32 sp|A2BTB1|RS9_PROMS 30S ribosomal protein S9 OS=Prochlorococcus ... 137 6e-32 sp|Q7UZW9|RS9_PROMP 30S ribosomal protein S9 OS=Prochlorococcus ... 135 2e-31 sp|A2BYQ9|RS9_PROM5 30S ribosomal protein S9 OS=Prochlorococcus ... 135 2e-31 sp|A3PF21|RS9_PROM0 30S ribosomal protein S9 OS=Prochlorococcus ... 135 3e-31 sp|Q6B8X6|RR9_GRATL 30S ribosomal protein S9, chloroplastic OS=G... 134 5e-31 sp|Q0ID32|RS9_SYNS3 30S ribosomal protein S9 OS=Synechococcus sp... 133 9e-31 sp|A2CC55|RS9_PROM3 30S ribosomal protein S9 OS=Prochlorococcus ... 132 1e-30 sp|O07828|RS9_PROMA 30S ribosomal protein S9 OS=Prochlorococcus ... 131 3e-30 sp|Q3AW66|RS9_SYNS9 30S ribosomal protein S9 OS=Synechococcus sp... 131 4e-30 sp|Q7V520|RS9_PROMM 30S ribosomal protein S9 OS=Prochlorococcus ... 131 4e-30 sp|Q7ND17|RS9_GLOVI 30S ribosomal protein S9 OS=Gloeobacter viol... 130 6e-30 sp|Q7U4H4|RS9_SYNPX 30S ribosomal protein S9 OS=Synechococcus sp... 130 1e-29 sp|Q3AMQ7|RS9_SYNSC 30S ribosomal protein S9 OS=Synechococcus sp... 129 2e-29 sp|Q1XDJ7|RR9_PORYE 30S ribosomal protein S9, chloroplastic OS=P... 127 8e-29 sp|P48135|RR9_CYAPA 30S ribosomal protein S9, cyanelle OS=Cyanop... 126 1e-28 sp|P51291|RR9_PORPU 30S ribosomal protein S9, chloroplastic OS=P... 125 2e-28 sp|P19459|RR9_GUITH 30S ribosomal protein S9, chloroplastic OS=G... 125 2e-28
>sp|Q9XJ27|RR9_ARATH 30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana GN=RPS9 PE=2 SV=1 Length = 208
Score = 180 bits (456), Expect = 8e-45 Identities = 90/120 (75%), Positives = 100/120 (83%) Frame = +1
Query: 1 RKTAVARVCLLEGTGKVIINYRTAQDYLQGNPLWLQYVKYPLVSLGYETKYDVIVKAEGG 180 RK A+ARV L EGTGKVIINYR A++YLQGNPLWLQYVK PLV+LGYE YD+ VKA GG Sbjct: 89 RKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYENSYDIFVKAHGG 148
Query: 181 GLSGQAQAILLGIARALCVANPANRDPLKKQGLLRRDPRSVERKKAGLHKARKAPQYSKR 360 GLSGQAQAI LG+ARAL + +R PLKK+GLL RD R VERKKAGL KARKAPQ+SKR Sbjct: 149 GLSGQAQAITLGVARALLKVSADHRSPLKKEGLLTRDARVVERKKAGLKKARKAPQFSKR 208
>sp|P82278|RR9_SPIOL 30S ribosomal protein S9, chloroplastic (Fragment) OS=Spinacia oleracea GN=PRPS9 PE=1 SV=1 Length = 197
Score = 175 bits (443), Expect = 3e-43 Identities = 88/120 (73%), Positives = 99/120 (82%) Frame = +1
Query: 1 RKTAVARVCLLEGTGKVIINYRTAQDYLQGNPLWLQYVKYPLVSLGYETKYDVIVKAEGG 180 RK A+ARV L EGTGK IINYR A++YLQGNPLWLQYVK PL +LGYET YDV VKA GG Sbjct: 78 RKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKTPLATLGYETNYDVFVKAHGG 137
Query: 181 GLSGQAQAILLGIARALCVANPANRDPLKKQGLLRRDPRSVERKKAGLHKARKAPQYSKR 360 GLSGQAQAI LG+ARAL + ++R PLK++GLL RD R VERKK GL KARKAPQ+SKR Sbjct: 138 GLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVERKKPGLKKARKAPQFSKR 197
>sp|Q2JL70|RS9_SYNJB 30S ribosomal protein S9 OS=Synechococcus sp. GN=rpsI PE=3 SV=1 Length = 136
Score = 150 bits (379), Expect = 7e-36 Identities = 78/120 (65%), Positives = 89/120 (74%) Frame = +1
Query: 1 RKTAVARVCLLEGTGKVIINYRTAQDYLQGNPLWLQYVKYPLVSLGYETKYDVIVKAEGG 180 RKTAVARV L+ GTGK+IIN R YLQ L VK PL LG E YD++V+A GG Sbjct: 17 RKTAVARVRLVPGTGKIIINDRPGDQYLQYQEALLASVKGPLEILGLENSYDILVRAHGG 76
Query: 181 GLSGQAQAILLGIARALCVANPANRDPLKKQGLLRRDPRSVERKKAGLHKARKAPQYSKR 360 G+ GQA AI LG+ARALC +PANR PLK +G L+RDPR+VERKK GL KARKAPQYSKR Sbjct: 77 GVHGQADAIKLGVARALCEVDPANRGPLKVEGYLKRDPRAVERKKYGLRKARKAPQYSKR 136
>sp|Q2JUJ9|RS9_SYNJA 30S ribosomal protein S9 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpsI PE=3 SV=1 Length = 137
Score = 150 bits (379), Expect = 7e-36 Identities = 78/120 (65%), Positives = 89/120 (74%) Frame = +1
Query: 1 RKTAVARVCLLEGTGKVIINYRTAQDYLQGNPLWLQYVKYPLVSLGYETKYDVIVKAEGG 180 RKTAVARV L+ GTGK+IIN R YLQ L VK PL LG E YD++V+A GG Sbjct: 18 RKTAVARVRLVPGTGKLIINDRPGDQYLQYQEALLASVKAPLELLGLENSYDILVRAHGG 77
Query: 181 GLSGQAQAILLGIARALCVANPANRDPLKKQGLLRRDPRSVERKKAGLHKARKAPQYSKR 360 G+ GQA AI LG+ARALC +PANR PLK +G L+RDPR+VERKK GL KARKAPQYSKR Sbjct: 78 GVHGQADAIKLGVARALCEVDPANRGPLKTEGYLKRDPRAVERKKYGLRKARKAPQYSKR 137
>sp|Q3MF93|RS9_ANAVT 30S ribosomal protein S9 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rpsI PE=3 SV=1 Length = 138
Score = 147 bits (372), Expect = 4e-35 Identities = 73/120 (60%), Positives = 92/120 (76%) Frame = +1
Query: 1 RKTAVARVCLLEGTGKVIINYRTAQDYLQGNPLWLQYVKYPLVSLGYETKYDVIVKAEGG 180 RK+AVARV L+ GTG++I+N + Y Q N +L +K PL +LG E +YD++VKAEGG Sbjct: 19 RKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLENEYDILVKAEGG 78
Query: 181 GLSGQAQAILLGIARALCVANPANRDPLKKQGLLRRDPRSVERKKAGLHKARKAPQYSKR 360 GL+GQA ++ LG+ARALC +P NR PLK +G L RDPR+ ERKK GLHKARKAPQYSKR Sbjct: 79 GLTGQADSVRLGVARALCQLDPENRPPLKTEGYLTRDPRAKERKKYGLHKARKAPQYSKR 138
>sp|Q8YPK7|RS9_ANASP 30S ribosomal protein S9 OS=Anabaena sp. (strain PCC 7120) GN=rpsI PE=3 SV=1 Length = 138
Score = 147 bits (372), Expect = 4e-35 Identities = 73/120 (60%), Positives = 92/120 (76%) Frame = +1
Query: 1 RKTAVARVCLLEGTGKVIINYRTAQDYLQGNPLWLQYVKYPLVSLGYETKYDVIVKAEGG 180 RK+AVARV L+ GTG++I+N + Y Q N +L +K PL +LG E +YD++VKAEGG Sbjct: 19 RKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLENEYDILVKAEGG 78
Query: 181 GLSGQAQAILLGIARALCVANPANRDPLKKQGLLRRDPRSVERKKAGLHKARKAPQYSKR 360 GL+GQA ++ LG+ARALC +P NR PLK +G L RDPR+ ERKK GLHKARKAPQYSKR Sbjct: 79 GLTGQADSVRLGVARALCQLDPENRPPLKTEGYLTRDPRAKERKKYGLHKARKAPQYSKR 138
>sp|Q8DMK7|RS9_THEEB 30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpsI PE=3 SV=1 Length = 137
Score = 146 bits (368), Expect = 1e-34 Identities = 75/120 (62%), Positives = 89/120 (74%) Frame = +1
Query: 1 RKTAVARVCLLEGTGKVIINYRTAQDYLQGNPLWLQYVKYPLVSLGYETKYDVIVKAEGG 180 RK+AVARV L+ G+G++ IN R DYLQ NP++L VK PL +LG E YD+ V A GG Sbjct: 18 RKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLENSYDIYVNATGG 77
Query: 181 GLSGQAQAILLGIARALCVANPANRDPLKKQGLLRRDPRSVERKKAGLHKARKAPQYSKR 360 GL+GQA AI LGIARALC + NR PLK +G L RDPR+ ER+K GL KARKAPQYSKR Sbjct: 78 GLTGQADAIRLGIARALCQLDIENRKPLKTEGYLTRDPRAKERRKYGLRKARKAPQYSKR 137
>sp|B0JY34|RS9_MICAN 30S ribosomal protein S9 OS=Microcystis aeruginosa (strain NIES-843) GN=rpsI PE=3 SV=1 Length = 137
Score = 146 bits (368), Expect = 1e-34 Identities = 72/120 (60%), Positives = 89/120 (74%) Frame = +1
Query: 1 RKTAVARVCLLEGTGKVIINYRTAQDYLQGNPLWLQYVKYPLVSLGYETKYDVIVKAEGG 180 RK+AVA V L+ GTG + +N R + + P ++Q +K PL +LG E +YD+IVKAEGG Sbjct: 18 RKSAVAAVRLVPGTGAITVNGRDGETHFNRIPTYIQTIKAPLETLGLENEYDIIVKAEGG 77
Query: 181 GLSGQAQAILLGIARALCVANPANRDPLKKQGLLRRDPRSVERKKAGLHKARKAPQYSKR 360 GL+GQA A+ LG+ARALC P NR PLK +G L RDPR+ ERKK GLHKARKAPQYSKR Sbjct: 78 GLTGQADAVKLGVARALCQLAPENRPPLKSEGYLTRDPRAKERKKYGLHKARKAPQYSKR 137
>sp|Q9MUV1|RR9_MESVI 30S ribosomal protein S9, chloroplastic OS=Mesostigma viride GN=rps9 PE=3 SV=1 Length = 137
Score = 140 bits (352), Expect = 9e-33 Identities = 74/120 (61%), Positives = 89/120 (74%) Frame = +1
Query: 1 RKTAVARVCLLEGTGKVIINYRTAQDYLQGNPLWLQYVKYPLVSLGYETKYDVIVKAEGG 180 RK+AVARV L+ G G+VIIN +YLQ N +L V+ PL +LG E YD+IVKA GG Sbjct: 18 RKSAVARVRLVPGNGEVIINGLPGTNYLQFNGSYLSAVRSPLETLGLEDNYDIIVKAVGG 77
Query: 181 GLSGQAQAILLGIARALCVANPANRDPLKKQGLLRRDPRSVERKKAGLHKARKAPQYSKR 360 GL+GQA+AI LG+ARALC + +NR PLKK+G L RD R ERKK GL KARKAPQ+SKR Sbjct: 78 GLTGQAEAIRLGVARALCTIDTSNRHPLKKEGFLTRDSRVKERKKYGLKKARKAPQFSKR 137
>sp|Q318L1|RS9_PROM9 30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT 9312) GN=rpsI PE=3 SV=1 Length = 136
Score = 138 bits (348), Expect = 3e-32 Identities = 71/120 (59%), Positives = 86/120 (71%) Frame = +1
Query: 1 RKTAVARVCLLEGTGKVIINYRTAQDYLQGNPLWLQYVKYPLVSLGYETKYDVIVKAEGG 180 RKT+VARV L+ G G++ IN R+ DYL NPL L +K PL +LG E YD++V GG Sbjct: 17 RKTSVARVRLIPGNGQIKINGRSGDDYLNFNPLHLNSIKAPLQTLGLENSYDILVNVFGG 76
Query: 181 GLSGQAQAILLGIARALCVANPANRDPLKKQGLLRRDPRSVERKKAGLHKARKAPQYSKR 360 GL+GQA AI G ARALC +P NR PLK +G L RDPR+ ER+K GL KARKAPQ+SKR Sbjct: 77 GLTGQADAIKQGAARALCELSPDNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQFSKR 136
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P2K3 |
Definition |
tr|A9P2K3|A9P2K3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
120 |
Score (bit) |
211.0 |
E-value |
3.0e-53 |
Report |
|