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NBDC - LSDB Archive
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DK949058
Clone id TST38A01NGRL0004_P15
Library
Length 645
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_P15. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
ATATCTTCGGCCCTCATCTGTTGCCTCTCCCCTCTCACCCACATAGCACCTACTGCCTTC
GCAAGTAGGTTTAGGGTTTCTGCAGTAGAGCAGCTATGGTGTCCGCCTGCTTCTCTTCAG
TTAATGGTTCGTTTGCAGCAGCAGCTGCCTCCACCACTAGGCCAGAGGGGCGTTTAACCC
TGTTGCAGGCTCCCCGCTCCTTGCGGACCTTGCGACCGTTCGAGCTTCGCATGCTCTCGC
TGTCTGTCCCTCGCAAAGGTCTACACAGACATGGATATGGTGTGGTTGGGCAAGCTCATG
CAGAGCTTTCTGTGGAAGAAGTTCAAGCCCTCGATGCCTCCTCAGACGAAGATGAGCGCG
AAGAAGGTGACTCTCTTGATAACGGACCTTCTTTTCGGGACAACGGCCCGCCCTTTGGTG
AGTCTGTGGCCAAGCTGTATGTTGGGAACCTGCCATGGAGCTGCAACAGCGAAGAACTTG
CTGGCGTTTTTCAGAAAGTGGGCAGCGTAGACATGGTTGAGGTTATTTATGACAAAGAGT
CTGGCAGGAGTCGTGGTTTTGGGTTTGTCACTATGAGCTCTGTAGAGGACTGTAATACTG
CCATTGAGAAGCTAGACGGGGCTGATTATGCTGGAAGGACATTGC
■■Homology search results ■■ -
sp_hit_id P28644
Definition sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea
Align length 84
Score (bit) 89.4
E-value 1.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949058|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_P15, 5'
         (645 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=...    89   1e-17
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor...    88   4e-17
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O...    87   6e-17
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=...    87   7e-17
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S...    85   4e-16
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O...    85   4e-16
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=...    83   1e-15
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=...    82   2e-15
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=...    82   3e-15
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=...    80   7e-15
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=...    79   3e-14
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=...    78   3e-14
sp|Q44554|RBPB_ANASP Putative RNA-binding protein rbpB OS=Anabae...    69   2e-11
sp|Q9WX37|RBPE_ANASP Putative RNA-binding protein rbpE OS=Anabae...    69   3e-11
sp|Q57014|RBPA_SYNY3 Putative RNA-binding protein rbpA OS=Synech...    66   1e-10
sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit...    66   1e-10
sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit...    66   1e-10
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=...    66   2e-10
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=...    66   2e-10
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=...    66   2e-10
sp|Q9WX39|RBPF_ANASP Putative RNA-binding protein rbpF OS=Anabae...    65   2e-10
sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabae...    65   2e-10
sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sa...    65   3e-10
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh...    65   4e-10
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi...    64   5e-10
sp|Q5RDA3|CSTF2_PONAB Cleavage stimulation factor 64 kDa subunit...    64   5e-10
sp|P33240|CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit...    64   5e-10
sp|Q8HXM1|CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit...    64   5e-10
sp|Q9P3U1|YKX5_SCHPO Uncharacterized RNA-binding protein C328.05...    64   7e-10
sp|Q8BIQ5|CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit...    64   7e-10

>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 233

 Score = 89.4 bits (220), Expect = 1e-17
 Identities = 45/84 (53%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = +3

Query: 399 DNGPPFGE--SVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVT 572
           + G  F E    AKL+VGNLP+  +SE+LAG+F   G V++ EVIY++E+ RSRGFGFVT
Sbjct: 43  EGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVT 102

Query: 573 MSSVEDCNTAIEKLDGADYAGRTL 644
           MS+VE+   A+E L+G D  GR L
Sbjct: 103 MSTVEEAEKAVELLNGYDMDGRQL 126



 Score = 74.3 bits (181), Expect = 5e-13
 Identities = 36/75 (48%), Positives = 47/75 (62%)
 Frame = +3

Query: 420 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 599
           E   ++YVGNLPW  ++  L  +F + G V    V+ D+E+GRSRGFGFVTMSS  + N 
Sbjct: 146 EPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVND 205

Query: 600 AIEKLDGADYAGRTL 644
           AI  LDG    GR +
Sbjct: 206 AIAALDGQTLDGRAV 220


>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
           chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
           SV=1
          Length = 289

 Score = 87.8 bits (216), Expect = 4e-17
 Identities = 45/87 (51%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
 Frame = +3

Query: 393 FRDNGPPFGESVA---KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFG 563
           F D  PP  +S +   KL+VGNLP++ +S +LA +F+  G+V+MVEVIYDK +GRSRGFG
Sbjct: 76  FADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFG 135

Query: 564 FVTMSSVEDCNTAIEKLDGADYAGRTL 644
           FVTMSSV +   A ++ +G +  GR L
Sbjct: 136 FVTMSSVSEVEAAAQQFNGYELDGRPL 162



 Score = 74.3 bits (181), Expect = 5e-13
 Identities = 37/88 (42%), Positives = 51/88 (57%)
 Frame = +3

Query: 381 NGPSFRDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGF 560
           +G  +   G     S  ++YVGNL W  +   L  +F + G V    VIYD++SGRS+GF
Sbjct: 188 SGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGF 247

Query: 561 GFVTMSSVEDCNTAIEKLDGADYAGRTL 644
           GFVT  S ++   AI+ LDGAD  GR +
Sbjct: 248 GFVTYDSSQEVQNAIKSLDGADLDGRQI 275


>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 291

 Score = 87.4 bits (215), Expect = 6e-17
 Identities = 43/79 (54%), Positives = 60/79 (75%)
 Frame = +3

Query: 408 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 587
           P F E + KL+VGNLP+S +S  LAG+F++ G+V+MVEVIYDK +GRSRGFGFVTMS+ E
Sbjct: 81  PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139

Query: 588 DCNTAIEKLDGADYAGRTL 644
           +   A ++ +G +  GR +
Sbjct: 140 EVEAAEQQFNGYEIDGRAI 158



 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
 Frame = +3

Query: 396 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 551
           RD    FG        +S  ++YVGNL W  +   L  +F + G+V   +V+YD++SGRS
Sbjct: 188 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 247

Query: 552 RGFGFVTMSSVEDCNTAIEKLDGADYAGRTL 644
           RGFGFVT SS ++ N AI+ L+G D  GR++
Sbjct: 248 RGFGFVTYSSSKEVNDAIDSLNGVDLDGRSI 278


>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 292

 Score = 87.0 bits (214), Expect = 7e-17
 Identities = 43/79 (54%), Positives = 60/79 (75%)
 Frame = +3

Query: 408 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 587
           P F E + KL+VGNLP+S +S  LAG+F++ G+V++VEVIYDK SGRSRGFGFVTMS+ E
Sbjct: 82  PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140

Query: 588 DCNTAIEKLDGADYAGRTL 644
           +   A ++ +G +  GR +
Sbjct: 141 EVEAAEQQFNGYEIDGRAI 159



 Score = 75.9 bits (185), Expect = 2e-13
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
 Frame = +3

Query: 396 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 551
           RD    FG        +S  ++YVGNL W  +   L  +F + G+V   +V+YD++SGRS
Sbjct: 189 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 248

Query: 552 RGFGFVTMSSVEDCNTAIEKLDGADYAGRTL 644
           RGFGFVT SS ++ N AI+ L+G D  GR++
Sbjct: 249 RGFGFVTYSSAKEVNDAIDSLNGIDLDGRSI 279


>sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic
           OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1
          Length = 260

 Score = 84.7 bits (208), Expect = 4e-16
 Identities = 38/76 (50%), Positives = 55/76 (72%)
 Frame = +3

Query: 417 GESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCN 596
           GE   +LYVGN+P + N++EL  + ++ G++++ EV+YDK SGRSR FGFVTM +VED N
Sbjct: 80  GEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDAN 139

Query: 597 TAIEKLDGADYAGRTL 644
             IEKL+  +  GR +
Sbjct: 140 AVIEKLNDTEIGGRKI 155



 Score = 47.0 bits (110), Expect = 8e-05
 Identities = 27/77 (35%), Positives = 42/77 (54%)
 Frame = +3

Query: 414 FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDC 593
           F ES  K+Y+GNL  +  +E L   F + G V   +V     + +S GFGFV+ SS E+ 
Sbjct: 179 FVESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEV 238

Query: 594 NTAIEKLDGADYAGRTL 644
             AI+ L+ +   G+ +
Sbjct: 239 EAAIQALNNSVLEGQKI 255


>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 273

 Score = 84.7 bits (208), Expect = 4e-16
 Identities = 40/71 (56%), Positives = 55/71 (77%)
 Frame = +3

Query: 432 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 611
           K++VGNLP+S +S  LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+   A ++
Sbjct: 88  KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 612 LDGADYAGRTL 644
            +G +  GR L
Sbjct: 148 FNGYELDGRAL 158



 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 38/75 (50%), Positives = 51/75 (68%)
 Frame = +3

Query: 420 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 599
           +S  ++YVGNL W  + + L  +F + G V   +V+YD++SGRSRGFGFVT SS E+ N 
Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244

Query: 600 AIEKLDGADYAGRTL 644
           AIE LDG D  GR +
Sbjct: 245 AIESLDGVDLNGRAI 259


>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1
          Length = 329

 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 39/72 (54%), Positives = 56/72 (77%)
 Frame = +3

Query: 429 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 608
           AKL+VGNL +  NS+ LA +F++ G+V++ EVIY++E+ +SRGFGFVTMSSV++  TA+E
Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209

Query: 609 KLDGADYAGRTL 644
           K +  D  GR L
Sbjct: 210 KFNRYDLNGRLL 221



 Score = 81.3 bits (199), Expect = 4e-15
 Identities = 38/82 (46%), Positives = 52/82 (63%)
 Frame = +3

Query: 399 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 578
           +  P   E   ++YVGNLPW  ++  L  +F + G V    V+YD+E+GRSRGFGFVTMS
Sbjct: 234 ERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMS 293

Query: 579 SVEDCNTAIEKLDGADYAGRTL 644
            V++ N AI  LDG +  GR +
Sbjct: 294 DVDELNEAISALDGQNLEGRAI 315


>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 279

 Score = 82.4 bits (202), Expect = 2e-15
 Identities = 43/93 (46%), Positives = 57/93 (61%), Gaps = 8/93 (8%)
 Frame = +3

Query: 390 SFRDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 545
           SFR+N    G        +S  ++YVGNL W  + + L  +F + G V   +V+YD++SG
Sbjct: 173 SFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSG 232

Query: 546 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTL 644
           RSRGFGFVT SS E+ N AIE LDG D  GR +
Sbjct: 233 RSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAI 265



 Score = 80.9 bits (198), Expect = 5e-15
 Identities = 39/71 (54%), Positives = 54/71 (76%)
 Frame = +3

Query: 432 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 611
           K++VGNL +S +S  LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+   A ++
Sbjct: 88  KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 612 LDGADYAGRTL 644
            +G +  GR L
Sbjct: 148 FNGYELDGRAL 158


>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana sylvestris PE=1 SV=1
          Length = 276

 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 40/72 (55%), Positives = 54/72 (75%)
 Frame = +3

Query: 429 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 608
           AKL+VGNLP+  +SE LA +FQ+ G V++ EVIY++E+ RSRGFGFVTMS+VE+ + A+E
Sbjct: 97  AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVE 156

Query: 609 KLDGADYAGRTL 644
                D  GR L
Sbjct: 157 LYSQYDLNGRLL 168



 Score = 77.4 bits (189), Expect = 6e-14
 Identities = 37/82 (45%), Positives = 50/82 (60%)
 Frame = +3

Query: 399 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 578
           +  P   +   ++YVGN+PW  +   L  VF + G V    V++D+ESGRSRGFGFVTMS
Sbjct: 181 ERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMS 240

Query: 579 SVEDCNTAIEKLDGADYAGRTL 644
           S  + + AI  LDG    GRT+
Sbjct: 241 SEAEMSEAIANLDGQTLDGRTI 262


>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2
          Length = 342

 Score = 80.5 bits (197), Expect = 7e-15
 Identities = 37/71 (52%), Positives = 54/71 (76%)
 Frame = +3

Query: 432 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 611
           KL+VGNL ++ +S +LA +F+  G+V+MVEVIYDK +GRSRGFGFVTMS+  +   A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159

Query: 612 LDGADYAGRTL 644
            +G ++ GR L
Sbjct: 160 FNGYEFEGRPL 170



 Score = 74.3 bits (181), Expect = 5e-13
 Identities = 35/71 (49%), Positives = 47/71 (66%)
 Frame = +3

Query: 432 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 611
           +LYVGNL W  +   L  +F + G V    VIYD++SGRS+GFGFVT+SS ++   AI  
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317

Query: 612 LDGADYAGRTL 644
           L+GAD  GR +
Sbjct: 318 LNGADLDGRQI 328
tr_hit_id A5BDH4
Definition tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 71
Score (bit) 107.0
E-value 5.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949058|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_P15, 5'
         (645 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis...   107   5e-22
tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome ...   106   1e-21
tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomit...   102   3e-20
tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea m...    99   2e-19
tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseo...    99   2e-19
tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Popul...    97   6e-19
tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medic...    96   2e-18
tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subs...    95   4e-18
tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza...    95   4e-18
tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1       94   5e-18
tr|O04240|O04240_VICFA RNA- or ssDNA-binding protein (Fragment) ...    93   2e-17
tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein (Fra...    93   2e-17
tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subs...    92   2e-17
tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1       92   2e-17
tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella paten...    92   2e-17
tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella paten...    92   2e-17
tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza...    92   2e-17
tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativ...    92   4e-17
tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subs...    92   4e-17
tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment) OS=Physcomit...    92   4e-17
tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea...    92   4e-17
tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza...    92   4e-17
tr|A7PT43|A7PT43_VITVI Chromosome chr8 scaffold_29, whole genome...    91   8e-17
tr|A9P1T0|A9P1T0_PICSI Putative uncharacterized protein OS=Picea...    90   1e-16
tr|A9NNN9|A9NNN9_PICSI Putative uncharacterized protein OS=Picea...    90   1e-16
tr|Q8L941|Q8L941_ARATH Putative RNA-binding protein OS=Arabidops...    88   5e-16
tr|Q7GA50|Q7GA50_ARATH Putative RNA-binding protein OS=Arabidops...    88   5e-16
tr|Q41367|Q41367_SPIOL 24 kDa RNA binding protein (Fragment) OS=...    88   5e-16
tr|Q9ZUJ3|Q9ZUJ3_ARATH T2K10.5 protein (Nucleic acid-binding pro...    86   1e-15
tr|B6SS58|B6SS58_MAIZE Ribonucleoprotein OS=Zea mays PE=2 SV=1         86   2e-15

>tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_026573 PE=4 SV=1
          Length = 355

 Score =  107 bits (268), Expect = 5e-22
 Identities = 48/71 (67%), Positives = 59/71 (83%)
 Frame = +3

Query: 432 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 611
           KLY GNLP+SC+S  LAG+ Q  GS ++VEV+YD+++GRSRGF FVTMSSVEDCN  IE 
Sbjct: 67  KLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVEDCNAVIEN 126

Query: 612 LDGADYAGRTL 644
           LDG++Y GRTL
Sbjct: 127 LDGSEYGGRTL 137



 Score = 47.0 bits (110), Expect = 0.001
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = +3

Query: 408 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 545
           P + E+  KL+VGNL WS  SE L  VFQ+ G+V    V+YD E+G
Sbjct: 150 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETG 195


>tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020349001
           PE=4 SV=1
          Length = 283

 Score =  106 bits (265), Expect = 1e-21
 Identities = 47/71 (66%), Positives = 60/71 (84%)
 Frame = +3

Query: 432 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 611
           KLY GNLP+SC+S +LAG+ Q  GS ++VEV+Y++++GRSRGF FVTMSSVEDCN  IE 
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171

Query: 612 LDGADYAGRTL 644
           LDG++Y GRTL
Sbjct: 172 LDGSEYGGRTL 182



 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 38/79 (48%), Positives = 53/79 (67%)
 Frame = +3

Query: 408 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 587
           P + E+  KL+VGNL WS  SE L  VFQ+ G+V    V+YD E+GRSRG+GFV  S+  
Sbjct: 195 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKA 254

Query: 588 DCNTAIEKLDGADYAGRTL 644
           + +TA+E L+G +  GR +
Sbjct: 255 EMDTALESLNGVELEGRAI 273


>tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_47163 PE=4 SV=1
          Length = 192

 Score =  102 bits (253), Expect = 3e-20
 Identities = 46/71 (64%), Positives = 57/71 (80%)
 Frame = +3

Query: 432 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 611
           KLY+GNLPW C+S +LAG+ Q+ GSV++VEVIYD+ESGRSRGF FVTM++ ED    IE+
Sbjct: 1   KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60

Query: 612 LDGADYAGRTL 644
           LDG D  GR L
Sbjct: 61  LDGHDVGGRPL 71



 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 36/71 (50%), Positives = 48/71 (67%)
 Frame = +3

Query: 432 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 611
           K++VGNL W  ++  L  +F   G V    V+YD+ESGRSRGFGFVT S V + + AI+ 
Sbjct: 108 KVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDS 167

Query: 612 LDGADYAGRTL 644
           LDGA++ GR L
Sbjct: 168 LDGAEFDGREL 178


>tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 287

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
 Frame = +3

Query: 384 GPSFRDNGPPFGESVA--KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 557
           G S  D+GP    S    KLY GNLP++C+S +LAG+ Q+  S +MVEV+YD+ +GRSRG
Sbjct: 99  GASSDDSGPSVAASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRG 158

Query: 558 FGFVTMSSVEDCNTAIEKLDGADYAGRTL 644
           F FVTM++V+DC   I+ LDG+ Y GRT+
Sbjct: 159 FAFVTMTTVQDCELVIKNLDGSLYGGRTM 187



 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
 Frame = +3

Query: 390 SFRDNGPP----FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 557
           +F D   P    + E+  KL+VGNL W+  SE L   F + G+V    V+YD E+GRSRG
Sbjct: 190 NFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRG 249

Query: 558 FGFVTMSSVEDCNTAIEKLDGADYAGRTL 644
           +GFV  S+ E+ + A+  L+G +  GR +
Sbjct: 250 YGFVCYSTREEMDEALSSLNGMEMEGREM 278


>tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseolus
           vulgaris GN=RNP1 PE=2 SV=1
          Length = 287

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 43/71 (60%), Positives = 57/71 (80%)
 Frame = +3

Query: 432 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 611
           KLY GNLP+S +S +LAG+ Q  GS +++EV+YD+++G+SRGF FVTMS +EDCN  IE 
Sbjct: 114 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 173

Query: 612 LDGADYAGRTL 644
           LDG +Y GRTL
Sbjct: 174 LDGKEYLGRTL 184



 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 34/79 (43%), Positives = 49/79 (62%)
 Frame = +3

Query: 408 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 587
           P + E+  KL+VGNL WS  +E L   FQ+ G+V    V+YD E+GRSRG+GFV  S+ E
Sbjct: 197 PLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKE 256

Query: 588 DCNTAIEKLDGADYAGRTL 644
           +   A+  L+  +  GR +
Sbjct: 257 EMEAALGALNDVELEGRAM 275


>tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 279

 Score = 97.4 bits (241), Expect = 6e-19
 Identities = 44/71 (61%), Positives = 57/71 (80%)
 Frame = +3

Query: 432 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 611
           KLY GNLP++ +S +LAG+ Q+ G+ +MVEV+Y +E+GRSRGF FVTMSS+EDC T IE 
Sbjct: 108 KLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCETVIEN 167

Query: 612 LDGADYAGRTL 644
           LDG+ Y GR L
Sbjct: 168 LDGSQYMGRIL 178



 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 36/79 (45%), Positives = 52/79 (65%)
 Frame = +3

Query: 408 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 587
           P + E+  KL++GNL WS  SE L   FQ+ G+V    V+YD E+G+SRG+GFV  S+ E
Sbjct: 191 PLYPETEYKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKE 250

Query: 588 DCNTAIEKLDGADYAGRTL 644
           +  TA++ L+G +  GR L
Sbjct: 251 ELETALQSLNGVELEGRAL 269


>tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 285

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 45/82 (54%), Positives = 62/82 (75%), Gaps = 6/82 (7%)
 Frame = +3

Query: 417 GESVA------KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 578
           GE+VA      KLY GNLP+S +S  LAG+ ++ GS +++EV+YD+++G+SRGF FVTMS
Sbjct: 103 GETVAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMS 162

Query: 579 SVEDCNTAIEKLDGADYAGRTL 644
            VEDCN  I+ LDG ++ GRTL
Sbjct: 163 CVEDCNAVIQNLDGKEFMGRTL 184



 Score = 70.9 bits (172), Expect = 6e-11
 Identities = 33/79 (41%), Positives = 52/79 (65%)
 Frame = +3

Query: 408 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 587
           P + E+  KL+VGNL W+  SE L   FQ+ G+V    V++D E+G+SRG+GFV+ ++  
Sbjct: 197 PLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKS 256

Query: 588 DCNTAIEKLDGADYAGRTL 644
           + +TA+  +D  +  GRTL
Sbjct: 257 EMDTALAIMDNVELEGRTL 275


>tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subsp.
           japonica GN=P0643F09.1 PE=2 SV=1
          Length = 316

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 41/71 (57%), Positives = 57/71 (80%)
 Frame = +3

Query: 432 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 611
           KLY GNLP++C+S +LAG+ Q   + +MVEV+YD+ +GRSRGF FVTMS++EDC   I+ 
Sbjct: 146 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 205

Query: 612 LDGADYAGRTL 644
           LDG+ Y+GRT+
Sbjct: 206 LDGSLYSGRTM 216



 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 36/79 (45%), Positives = 52/79 (65%)
 Frame = +3

Query: 408 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 587
           P + E+  KL+VGNL W+  SE L  +FQK G+V    V+YD E+GRSRG+GFV  S+ E
Sbjct: 229 PLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKE 288

Query: 588 DCNTAIEKLDGADYAGRTL 644
           + + A+  L+G +  GR +
Sbjct: 289 EMDEALSSLNGTELEGREI 307


>tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09422 PE=4 SV=1
          Length = 318

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 41/71 (57%), Positives = 57/71 (80%)
 Frame = +3

Query: 432 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 611
           KLY GNLP++C+S +LAG+ Q   + +MVEV+YD+ +GRSRGF FVTMS++EDC   I+ 
Sbjct: 148 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 207

Query: 612 LDGADYAGRTL 644
           LDG+ Y+GRT+
Sbjct: 208 LDGSLYSGRTM 218



 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 36/79 (45%), Positives = 52/79 (65%)
 Frame = +3

Query: 408 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 587
           P + E+  KL+VGNL W+  SE L  +FQK G+V    V+YD E+GRSRG+GFV  S+ E
Sbjct: 231 PLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKE 290

Query: 588 DCNTAIEKLDGADYAGRTL 644
           + + A+  L+G +  GR +
Sbjct: 291 EMDEALSSLNGTELEGREI 309


>tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
          Length = 268

 Score = 94.4 bits (233), Expect = 5e-18
 Identities = 45/82 (54%), Positives = 62/82 (75%)
 Frame = +3

Query: 399 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 578
           D    F E + KL+VGNLP+S +S +LAG+F++ GSV+MVEV+YD+ +GRSRGFGFVTMS
Sbjct: 70  DGSEEFSEDL-KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMS 128

Query: 579 SVEDCNTAIEKLDGADYAGRTL 644
           S E+   A+E+ +G  + GR L
Sbjct: 129 SAEEAEAAVEQFNGYAFQGRQL 150



 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 39/80 (48%), Positives = 51/80 (63%)
 Frame = +3

Query: 405 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 584
           G  F +S  K+YVGNL W  ++  L  +F + G V   +VIYD++SGRSRGFGFVT  S 
Sbjct: 176 GGGFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSA 235

Query: 585 EDCNTAIEKLDGADYAGRTL 644
           ++ N AI  LDG D  GR +
Sbjct: 236 QEVNNAISNLDGIDLDGRQI 255