DK949085 |
Clone id |
TST38A01NGRL0005_A19 |
Library |
TST38 |
Length |
670 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_A19. 5' end sequence. |
Accession |
DK949085 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL691Contig1 |
Sequence |
CGCTTGGGCGCACCGCGACACACACACACACACACACACACACACAGAGTGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACAAGCTGAGCATTCGTGAT CTGAGAGACTGGGTGCGATCCATGGCTCAGCTTGTGGAAGATTGGTACAAGCAAATGCCT CTCATCACTCGCTCCTACCTTACCCTTTCTGTTCTTACCACTGTTGGCTGCGCCCTGGAT GTGATATCTCCTTATCACATATATCTCAACTCTGAGAAGGTCATTCGGCATTTTCAGTAC TGGAGACTGTTTACAAATTTTTTCTATTTTGGCAAGCTTGATCTTGATTTTTTGTTCCAC ATGTTTTTCCTGGCACGATACTGCAAACTGCTTGAGGAGACATCATTCAGGGGTCGAACG GCAGATTTCTTCTACATGCTTTTTTTTGGTGGAACTCTTTTGACAGGAGTTGTTCTTCTT GGTGGAATGTTTCAATTAGTGTCCGAGTCCTTGGCAAGAATACTGTTCTTGAGCAACTCC CTCACTTTCATGATGGTGTACGTTTGGAGTAAACGCAACCCACACGTACACATGAGTTTT CTTGGACTTTTTACTTTTACGGCGCCCTACTTGCCTTGGGTGCTCCTTGGCTTTTCGATT ATTGTTGGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q851X7 |
Definition |
sp|Q851X7|DERL2_ORYSJ Derlin-2 OS=Oryza sativa subsp. japonica |
Align length |
176 |
Score (bit) |
226.0 |
E-value |
8.0e-59 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TGM9 |
Definition |
tr|A9TGM9|A9TGM9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
176 |
Score (bit) |
227.0 |
E-value |
6.0e-58 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949085|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_A19, 5' (670 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TGM9|A9TGM9_PHYPA Predicted protein OS=Physcomitrella paten... 227 6e-58 tr|A9SDP4|A9SDP4_PHYPA Predicted protein OS=Physcomitrella paten... 227 6e-58 tr|Q0DLQ3|Q0DLQ3_ORYSJ Os03g0852200 protein OS=Oryza sativa subs... 226 1e-57 tr|B6TKJ7|B6TKJ7_MAIZE Derlin-2 OS=Zea mays PE=2 SV=1 226 1e-57 tr|A3APU4|A3APU4_ORYSJ Putative uncharacterized protein OS=Oryza... 226 1e-57 tr|A2XP56|A2XP56_ORYSI Putative uncharacterized protein OS=Oryza... 226 1e-57 tr|B7FN17|B7FN17_MEDTR Putative uncharacterized protein OS=Medic... 223 6e-57 tr|A7R0M5|A7R0M5_VITVI Chromosome chr10 scaffold_312, whole geno... 223 8e-57 tr|A5AGW9|A5AGW9_VITVI Putative uncharacterized protein OS=Vitis... 223 8e-57 tr|A4S6T5|A4S6T5_OSTLU Predicted protein OS=Ostreococcus lucimar... 162 1e-38 tr|B6M5A1|B6M5A1_BRAFL Putative uncharacterized protein OS=Branc... 155 2e-36 tr|A7RM47|A7RM47_NEMVE Predicted protein OS=Nematostella vectens... 152 2e-35 tr|Q4VBS8|Q4VBS8_DANRE Zgc:110436 OS=Danio rerio GN=zgc:110436 P... 149 1e-34 tr|A2I451|A2I451_MACHI Putative Der1-like domain family, member ... 149 1e-34 tr|Q28F56|Q28F56_XENTR Der1-like domain family, member 3derlin-3... 149 2e-34 tr|B5X6R0|B5X6R0_SALSA Derlin-2 OS=Salmo salar GN=DERL2 PE=2 SV=1 149 2e-34 tr|B7PLT4|B7PLT4_IXOSC Membrane protein, putative (Fragment) OS=... 148 3e-34 tr|Q5QNV2|Q5QNV2_MOUSE Der1-like domain family, member 2 OS=Mus ... 146 1e-33 tr|Q5QNV1|Q5QNV1_MOUSE Der1-like domain family, member 2 OS=Mus ... 146 1e-33 tr|Q6P2A0|Q6P2A0_DANRE Der1-like domain family, member 3 OS=Dani... 146 1e-33 tr|B8C4L3|B8C4L3_THAPS Putative uncharacterized protein OS=Thala... 146 1e-33 tr|Q7Q4X4|Q7Q4X4_ANOGA AGAP000832-PA OS=Anopheles gambiae GN=AGA... 146 1e-33 tr|B5FZE4|B5FZE4_TAEGU Putative carcinoma related gene variant 3... 144 5e-33 tr|B6ZDK9|B6ZDK9_HUMAN Putative uncharacterized protein DERL3 OS... 137 6e-31 tr|Q4VIV0|Q4VIV0_DROBU Dbuz\CG14899-PA OS=Drosophila buzzatii GN... 136 1e-30 tr|B5DY45|B5DY45_DROPS GA26359 OS=Drosophila pseudoobscura pseud... 136 1e-30 tr|B4K687|B4K687_DROMO GI23500 OS=Drosophila mojavensis GN=GI235... 136 1e-30 tr|B4M4E0|B4M4E0_DROVI GJ10254 OS=Drosophila virilis GN=GJ10254 ... 136 1e-30 tr|Q9VEU2|Q9VEU2_DROME CG14899 OS=Drosophila melanogaster GN=CG1... 135 2e-30 tr|B4QX19|B4QX19_DROSI GD20283 OS=Drosophila simulans GN=GD20283... 135 2e-30
>tr|A9TGM9|A9TGM9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_194907 PE=4 SV=1 Length = 243
Score = 227 bits (578), Expect = 6e-58 Identities = 116/176 (65%), Positives = 125/176 (71%) Frame = +1
Query: 142 MAQLVEDWYKQMPLITRSYLTLSVLTTVGCALDVISPYHIYLNSEKVIRHFQYWRLFTNF 321 MAQLVEDWYKQMP+ITRSYLTLSVLTT GCAL+VIS Y +YLNS +I +Q WRL TNF Sbjct: 1 MAQLVEDWYKQMPIITRSYLTLSVLTTAGCALEVISAYDVYLNSTLIIHDYQVWRLITNF 60
Query: 322 FYFGKXXXXXXXXXXXXARYCKLLEETSFRGRTADXXXXXXXXXXXXXXXXXXXXXXQLV 501 FYFGK ARYCKLLEETSFRGRTAD Sbjct: 61 FYFGKLDLDFLFHMFFLARYCKLLEETSFRGRTADFFFMLLFGGTLLTIYVVGGGMLTFA 120
Query: 502 SESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSIIVG 669 + A ILFLSNSLTFMMVYVWSKRNPHV MSFLGLF+FTAPYLPWVLLGFS++VG Sbjct: 121 A-PFADILFLSNSLTFMMVYVWSKRNPHVQMSFLGLFSFTAPYLPWVLLGFSVMVG 175
>tr|A9SDP4|A9SDP4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106279 PE=4 SV=1 Length = 236
Score = 227 bits (578), Expect = 6e-58 Identities = 113/176 (64%), Positives = 129/176 (73%) Frame = +1
Query: 142 MAQLVEDWYKQMPLITRSYLTLSVLTTVGCALDVISPYHIYLNSEKVIRHFQYWRLFTNF 321 MAQLVEDWYKQMP+ITR+YLTLSVLTT GCAL+VISP+ +YLNS+ +I +++ WRL TNF Sbjct: 1 MAQLVEDWYKQMPIITRTYLTLSVLTTAGCALEVISPFDVYLNSKLIIHNYEVWRLITNF 60
Query: 322 FYFGKXXXXXXXXXXXXARYCKLLEETSFRGRTADXXXXXXXXXXXXXXXXXXXXXXQLV 501 FYFGK ARYCKLLE+TSFRGRTAD + Sbjct: 61 FYFGKLDLDFLFHMFFLARYCKLLEDTSFRGRTADFFFMLLFGGTILTIIVVGGGLL-MF 119
Query: 502 SESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSIIVG 669 + A ILFLSNSLTFMMVYVWSKRNPHV MSFLGLF+FTAPYLPWVLLGFS++VG Sbjct: 120 AAPFADILFLSNSLTFMMVYVWSKRNPHVQMSFLGLFSFTAPYLPWVLLGFSVMVG 175
>tr|Q0DLQ3|Q0DLQ3_ORYSJ Os03g0852200 protein OS=Oryza sativa subsp. japonica GN=Os03g0852200 PE=2 SV=1 Length = 249
Score = 226 bits (576), Expect = 1e-57 Identities = 109/176 (61%), Positives = 126/176 (71%) Frame = +1
Query: 142 MAQLVEDWYKQMPLITRSYLTLSVLTTVGCALDVISPYHIYLNSEKVIRHFQYWRLFTNF 321 MAQ VE+WY+QMP+ITRSYLT +V+TTVGC L++ISPYH+YLN + V++H++ WRL TNF Sbjct: 1 MAQAVEEWYRQMPIITRSYLTAAVVTTVGCTLEIISPYHLYLNPKLVVQHYEIWRLVTNF 60
Query: 322 FYFGKXXXXXXXXXXXXARYCKLLEETSFRGRTADXXXXXXXXXXXXXXXXXXXXXXQLV 501 YF K ARYCKLLEE SFRGRTAD + Sbjct: 61 LYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYI 120
Query: 502 SESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSIIVG 669 SE+ ARILFLSNSLTFMMVYVWSK NP +HMSFLGLFTFTA YLPWVLLGFSI+VG Sbjct: 121 SETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVG 176
>tr|B6TKJ7|B6TKJ7_MAIZE Derlin-2 OS=Zea mays PE=2 SV=1 Length = 249
Score = 226 bits (576), Expect = 1e-57 Identities = 109/176 (61%), Positives = 126/176 (71%) Frame = +1
Query: 142 MAQLVEDWYKQMPLITRSYLTLSVLTTVGCALDVISPYHIYLNSEKVIRHFQYWRLFTNF 321 MAQ VE+WY+QMP+ITRSYLT +V+TTVGC L++ISPYH+YLN + V++H++ WRL TNF Sbjct: 1 MAQAVEEWYRQMPIITRSYLTAAVVTTVGCTLEIISPYHLYLNPKLVVQHYEIWRLVTNF 60
Query: 322 FYFGKXXXXXXXXXXXXARYCKLLEETSFRGRTADXXXXXXXXXXXXXXXXXXXXXXQLV 501 YF K ARYCKLLEE SFRGRTAD + Sbjct: 61 LYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYI 120
Query: 502 SESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSIIVG 669 SE+ ARILFLSNSLTFMMVYVWSK NP +HMSFLGLFTFTA YLPWVLLGFSI+VG Sbjct: 121 SETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVG 176
>tr|A3APU4|A3APU4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012816 PE=4 SV=1 Length = 269
Score = 226 bits (576), Expect = 1e-57 Identities = 109/176 (61%), Positives = 126/176 (71%) Frame = +1
Query: 142 MAQLVEDWYKQMPLITRSYLTLSVLTTVGCALDVISPYHIYLNSEKVIRHFQYWRLFTNF 321 MAQ VE+WY+QMP+ITRSYLT +V+TTVGC L++ISPYH+YLN + V++H++ WRL TNF Sbjct: 1 MAQAVEEWYRQMPIITRSYLTAAVVTTVGCTLEIISPYHLYLNPKLVVQHYEIWRLVTNF 60
Query: 322 FYFGKXXXXXXXXXXXXARYCKLLEETSFRGRTADXXXXXXXXXXXXXXXXXXXXXXQLV 501 YF K ARYCKLLEE SFRGRTAD + Sbjct: 61 LYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYI 120
Query: 502 SESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSIIVG 669 SE+ ARILFLSNSLTFMMVYVWSK NP +HMSFLGLFTFTA YLPWVLLGFSI+VG Sbjct: 121 SETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVG 176
>tr|A2XP56|A2XP56_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14361 PE=4 SV=1 Length = 249
Score = 226 bits (576), Expect = 1e-57 Identities = 109/176 (61%), Positives = 126/176 (71%) Frame = +1
Query: 142 MAQLVEDWYKQMPLITRSYLTLSVLTTVGCALDVISPYHIYLNSEKVIRHFQYWRLFTNF 321 MAQ VE+WY+QMP+ITRSYLT +V+TTVGC L++ISPYH+YLN + V++H++ WRL TNF Sbjct: 1 MAQAVEEWYRQMPIITRSYLTAAVVTTVGCTLEIISPYHLYLNPKLVVQHYEIWRLVTNF 60
Query: 322 FYFGKXXXXXXXXXXXXARYCKLLEETSFRGRTADXXXXXXXXXXXXXXXXXXXXXXQLV 501 YF K ARYCKLLEE SFRGRTAD + Sbjct: 61 LYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYI 120
Query: 502 SESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSIIVG 669 SE+ ARILFLSNSLTFMMVYVWSK NP +HMSFLGLFTFTA YLPWVLLGFSI+VG Sbjct: 121 SETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVG 176
>tr|B7FN17|B7FN17_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 244
Score = 223 bits (569), Expect = 6e-57 Identities = 106/176 (60%), Positives = 127/176 (72%) Frame = +1
Query: 142 MAQLVEDWYKQMPLITRSYLTLSVLTTVGCALDVISPYHIYLNSEKVIRHFQYWRLFTNF 321 MAQ VE+WYKQMP+ITRSYLT +V+TT+GC+L++ISPYH+YLN V++ +Q+WRL TNF Sbjct: 1 MAQAVEEWYKQMPVITRSYLTAAVVTTIGCSLEIISPYHLYLNPRLVVKQYQFWRLVTNF 60
Query: 322 FYFGKXXXXXXXXXXXXARYCKLLEETSFRGRTADXXXXXXXXXXXXXXXXXXXXXXQLV 501 YF K ARYCKLLEE SFRGRTAD + Sbjct: 61 LYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGASVLTGIVLPGGMIPYL 120
Query: 502 SESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSIIVG 669 SES A+I+FLSNSLTF+MVYVWSK+NP +HMSFLGLFTFTA YLPWVLLGFS++VG Sbjct: 121 SESFAKIIFLSNSLTFVMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVG 176
>tr|A7R0M5|A7R0M5_VITVI Chromosome chr10 scaffold_312, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011502001 PE=4 SV=1 Length = 247
Score = 223 bits (568), Expect = 8e-57 Identities = 106/176 (60%), Positives = 127/176 (72%) Frame = +1
Query: 142 MAQLVEDWYKQMPLITRSYLTLSVLTTVGCALDVISPYHIYLNSEKVIRHFQYWRLFTNF 321 MAQ VE+WYKQMP+ITRSYLT +++TT+GC+LD+ISPY++YLN + V++ ++ WRL TNF Sbjct: 1 MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIISPYNLYLNPKLVVKQYEVWRLITNF 60
Query: 322 FYFGKXXXXXXXXXXXXARYCKLLEETSFRGRTADXXXXXXXXXXXXXXXXXXXXXXQLV 501 YF K ARYCKLLEE SFRGRTAD V Sbjct: 61 LYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYV 120
Query: 502 SESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSIIVG 669 SES A+I+FLSNSLTFMMVYVWSK+NP +HMSFLGLFTFTA YLPWVLLGFS++VG Sbjct: 121 SESFAKIIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVG 176
>tr|A5AGW9|A5AGW9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027642 PE=4 SV=1 Length = 238
Score = 223 bits (568), Expect = 8e-57 Identities = 106/176 (60%), Positives = 127/176 (72%) Frame = +1
Query: 142 MAQLVEDWYKQMPLITRSYLTLSVLTTVGCALDVISPYHIYLNSEKVIRHFQYWRLFTNF 321 MAQ VE+WYKQMP+ITRSYLT +++TT+GC+LD+ISPY++YLN + V++ ++ WRL TNF Sbjct: 1 MAQAVEEWYKQMPIITRSYLTAAIVTTIGCSLDIISPYNLYLNPKLVVKQYEVWRLITNF 60
Query: 322 FYFGKXXXXXXXXXXXXARYCKLLEETSFRGRTADXXXXXXXXXXXXXXXXXXXXXXQLV 501 YF K ARYCKLLEE SFRGRTAD V Sbjct: 61 LYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYV 120
Query: 502 SESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSIIVG 669 SES A+I+FLSNSLTFMMVYVWSK+NP +HMSFLGLFTFTA YLPWVLLGFS++VG Sbjct: 121 SESFAKIIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVG 176
>tr|A4S6T5|A4S6T5_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_27234 PE=4 SV=1 Length = 247
Score = 162 bits (411), Expect = 1e-38 Identities = 79/176 (44%), Positives = 103/176 (58%) Frame = +1
Query: 142 MAQLVEDWYKQMPLITRSYLTLSVLTTVGCALDVISPYHIYLNSEKVIRHFQYWRLFTNF 321 MA +E+WY +P +TR YLTL+ TVGCAL++ISP ++Y NS+ + + ++ WRL TNF Sbjct: 1 MANTLEEWYASVPTVTRMYLTLTFAVTVGCALELISPLNVYFNSKLIFQEYELWRLVTNF 60
Query: 322 FYFGKXXXXXXXXXXXXARYCKLLEETSFRGRTADXXXXXXXXXXXXXXXXXXXXXXQLV 501 F+FG +RYC++LEE SF+GR+ D Sbjct: 61 FFFGSLGVDFVFHMFFLSRYCRMLEEGSFQGRSCDFFYMLLFGGTLL-----------TA 109
Query: 502 SESLARILFLSNSLTFMMVYVWSKRNPHVHMSFLGLFTFTAPYLPWVLLGFSIIVG 669 + FL SLTFMMVYVW +RN MSFLGLF FTAPYLPWVLL FS ++G Sbjct: 110 FAPFVNVQFLGTSLTFMMVYVWGRRNAATQMSFLGLFNFTAPYLPWVLLIFSTLIG 165
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