BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949096|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_B06, 5'
         (511 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8A7D1|TILS_BACTN tRNA(Ile)-lysidine synthase OS=Bacteroides ...    32   2.2  
sp|A4D0S4|LAMB4_HUMAN Laminin subunit beta-4 OS=Homo sapiens GN=...    31   2.9  
sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protei...    30   5.0  
sp|Q9M2Y4|PP276_ARATH Pentatricopeptide repeat-containing protei...    30   6.6  
sp|Q0Q4F2|SPIKE_BC133 Spike glycoprotein OS=Bat coronavirus 133/...    30   8.5  
sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Dan...    30   8.5  

>sp|Q8A7D1|TILS_BACTN tRNA(Ile)-lysidine synthase OS=Bacteroides
           thetaiotaomicron GN=tilS PE=3 SV=1
          Length = 426

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -2

Query: 294 ILHTTGFSLNALPDLLHGKGDQ*CRSDIQTCDQLTSNHGIQVHFTLINKTGTAT 133
           +LHT G+   A     H +G++  R D +   QL   +GI++H T  N T  AT
Sbjct: 38  VLHTAGYQCEAAHCNFHLRGEESNR-DERFVRQLCQKYGIRLHITDFNTTQYAT 90


>sp|A4D0S4|LAMB4_HUMAN Laminin subunit beta-4 OS=Homo sapiens
           GN=LAMB4 PE=2 SV=1
          Length = 1761

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 21  RCCNLCSDGSYLRM*HYGCGPWVC 92
           RCC+ CS GSY  + H+GC P  C
Sbjct: 797 RCCDRCSTGSY-DLGHHGCHPCHC 819


>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein
           At1g31430 OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
          Length = 570

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 13/52 (25%)
 Frame = +3

Query: 219 SCIIDLLCHAE--DQARHSVKSL-----------WCEVYNASRNWGDLQVGQ 335
           SC+IDLLC A   D+A   +  +           +C + +A+RN+G++++ +
Sbjct: 420 SCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAE 471


>sp|Q9M2Y4|PP276_ARATH Pentatricopeptide repeat-containing protein
           At3g49740 OS=Arabidopsis thaliana GN=PCMP-E84 PE=2 SV=1
          Length = 737

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
 Frame = +3

Query: 171 LECHGCLSVGRTFGYHSCIIDLLCHAE--DQARHSVK----------SLWCEVYNASRNW 314
           +E HG +   R   + SC++DLL  A   D+A   VK           +W  +++A    
Sbjct: 618 VEFHGVI---RNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAH 674

Query: 315 GDLQVGQM 338
           GDL++G+M
Sbjct: 675 GDLKLGKM 682


>sp|Q0Q4F2|SPIKE_BC133 Spike glycoprotein OS=Bat coronavirus
           133/2005 GN=S PE=3 SV=1
          Length = 1350

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 477 TGDRCTSKTYYSSYFLVSKKHSITCLSVINQ 385
           TG+RC S + Y++YF+    HS  C S IN+
Sbjct: 197 TGNRCPSGSDYNAYFIYETIHS-DCQSTINR 226


>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio
           rerio GN=nek8 PE=2 SV=1
          Length = 697

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 259 QGIQ*KACGVKYTMLVGT-GEIYRWDK 336
           QGI   ACG  +T+ +G  GE+Y W K
Sbjct: 618 QGITMAACGDAFTLAIGAEGEVYTWGK 644

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949096|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_B06, 5'
         (511 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6GQZ6|Q6GQZ6_XENLA MGC83148 protein OS=Xenopus laevis GN=MGC...    37   0.74 
tr|Q6DF77|Q6DF77_XENLA Gphn protein OS=Xenopus laevis GN=gphn PE...    35   2.8  

>tr|Q6GQZ6|Q6GQZ6_XENLA MGC83148 protein OS=Xenopus laevis
           GN=MGC83148 PE=2 SV=1
          Length = 860

 Score = 36.6 bits (83), Expect = 0.74
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -2

Query: 381 NAEPPLS-CEHHMQMAFVPPVNLPSSY*HCILHTTGFSLNALPDLLHGKGDQ 229
           +AEP  S C HH+  +F  P+  P+S   C  HTT  +L  +PD +  +G Q
Sbjct: 315 SAEPSHSGCSHHLLSSFAEPI--PTSSTSCSHHTTSSALEPIPDSIISRGVQ 364


>tr|Q6DF77|Q6DF77_XENLA Gphn protein OS=Xenopus laevis GN=gphn PE=2
           SV=1
          Length = 857

 Score = 34.7 bits (78), Expect = 2.8
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = -2

Query: 432 LVSKKHSITCLSVINQCNAEPPLS-CEHHMQMAFVPPVNLPSSY*HCILHTTGFSLNALP 256
           L+S  H  T        + EP  S C HH+  +FV P+  P+S   C  H T  +L  +P
Sbjct: 306 LISSSHHTT--------SVEPSHSGCSHHLSSSFVEPI--PTS---CSHHATSIALEPIP 352

Query: 255 DLLHGKGDQ 229
           D +  +G Q
Sbjct: 353 DSIISRGVQ 361