DK949105 |
Clone id |
TST38A01NGRL0005_B15 |
Library |
TST38 |
Length |
452 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_B15. 5' end sequence. |
Accession |
DK949105 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL182Contig1 |
Sequence |
CTGTGCTGCTGCAGCAAACCAGCGGCCATGGTGAACGTTCCAAAGACGAAGAAGTCCTTT TGCAAGGGCAAGGACTGCAAGAAGCACACTTTGCATAAGGTGACTCAATACAAGAAGGGC AAGGACAGTCTCTATGTGCAAGGAAAGAGGCGTTATGACAGGAAGCAATCTGGCTATGGT GGCCAAACAAAGCCGGTCTTCCACAAGAAGGCTAAGACTACAAAGAAAATTGTGTTAAGG TTGCAATGTCAGAGTTGCAAGCATGTAACTCAGCATCCAATCAAGCGATGCAAGCACTTT GAGATTGGTGGTGACAAGAAGCGCAAGGGTGCCATGTACTAGGTCAATTTTTGCAGCATC ATGATGAATCGAAGAGTTTTGCTCAGACCTTTGCACTGTTTTAAGTATTAAATTGAACTG AATTTTGTGACAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q96499 |
Definition |
sp|Q96499|RL44_GOSHI 60S ribosomal protein L44 OS=Gossypium hirsutum |
Align length |
101 |
Score (bit) |
171.0 |
E-value |
1.0e-42 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9ST20 |
Definition |
tr|A9ST20|A9ST20_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
101 |
Score (bit) |
178.0 |
E-value |
1.0e-43 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949105|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_B15, 5' (431 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9ST20|A9ST20_PHYPA Predicted protein OS=Physcomitrella paten... 178 1e-43 tr|A9RQN3|A9RQN3_PHYPA Predicted protein OS=Physcomitrella paten... 176 4e-43 tr|A9RD45|A9RD45_PHYPA Predicted protein OS=Physcomitrella paten... 176 4e-43 tr|A9RFG1|A9RFG1_PHYPA Predicted protein (Fragment) OS=Physcomit... 174 2e-42 tr|A9PD13|A9PD13_POPTR Putative uncharacterized protein OS=Popul... 172 6e-42 tr|B8LKF1|B8LKF1_PICSI Putative uncharacterized protein OS=Picea... 171 2e-41 tr|Q00508|Q00508_CANMA Ribosomal protein L41 OS=Candida maltosa ... 171 2e-41 tr|A7Q2A2|A7Q2A2_VITVI Chromosome chr13 scaffold_45, whole genom... 170 3e-41 tr|Q8H5N0|Q8H5N0_ORYSJ Os07g0450000 protein OS=Oryza sativa subs... 169 5e-41 tr|B6TXV2|B6TXV2_MAIZE 60S ribosomal protein L44 OS=Zea mays PE=... 169 5e-41 tr|B3TLV9|B3TLV9_ELAGV 60S ribosomal protein L44 OS=Elaeis guine... 169 5e-41 tr|B3TLU1|B3TLU1_ELAGV 60S ribosomal protein L44 OS=Elaeis guine... 169 5e-41 tr|B3TLU0|B3TLU0_ELAGV 60S ribosomal protein L44 OS=Elaeis guine... 169 5e-41 tr|A6N0K7|A6N0K7_ORYSI Putative uncharacterized protein OS=Oryza... 169 5e-41 tr|A7P2V6|A7P2V6_VITVI Chromosome chr1 scaffold_5, whole genome ... 169 6e-41 tr|A7P2V5|A7P2V5_VITVI Chromosome chr1 scaffold_5, whole genome ... 169 6e-41 tr|A9P9G6|A9P9G6_POPTR Putative uncharacterized protein OS=Popul... 168 1e-40 tr|Q0D5Z3|Q0D5Z3_ORYSJ Os07g0523100 protein OS=Oryza sativa subs... 167 2e-40 tr|Q94ER6|Q94ER6_BRARP 60S ribosomal protein L144 (Fragment) OS=... 167 2e-40 tr|Q6RI22|Q6RI22_9ASPA 60S ribosomal protein L44 OS=Phalaenopsis... 166 4e-40 tr|B6SIY6|B6SIY6_MAIZE 60S ribosomal protein L44 OS=Zea mays PE=... 166 4e-40 tr|A9NQ93|A9NQ93_PICSI Putative uncharacterized protein OS=Picea... 166 4e-40 tr|B7FGY8|B7FGY8_MEDTR Putative uncharacterized protein OS=Medic... 166 7e-40 tr|B6SHJ5|B6SHJ5_MAIZE 60S ribosomal protein L44 OS=Zea mays PE=... 165 9e-40 tr|Q0D5Z2|Q0D5Z2_ORYSJ Os07g0523300 protein (Fragment) OS=Oryza ... 165 1e-39 tr|B8LRK8|B8LRK8_PICSI Putative uncharacterized protein OS=Picea... 164 3e-39 tr|Q2V9C3|Q2V9C3_SOLTU Ribosomal protein L41-like OS=Solanum tub... 162 1e-38 tr|A9UDU7|A9UDU7_9BILA Putative 60S ribosomal protein RPL36A OS=... 156 4e-37 tr|A9UPR3|A9UPR3_MONBE Predicted protein OS=Monosiga brevicollis... 156 6e-37 tr|B0Z9N5|B0Z9N5_9BILA Ribosomal protein rpl36a OS=Lineus viridi... 155 7e-37
>tr|A9ST20|A9ST20_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106959 PE=3 SV=1 Length = 105
Score = 178 bits (451), Expect = 1e-43 Identities = 85/101 (84%), Positives = 86/101 (85%) Frame = +1
Query: 28 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHK 207 MVNVP HTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHK Sbjct: 1 MVNVPKTKKSFCPGKACKKHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 208 KAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 330 KAKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG Sbjct: 61 KAKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101
>tr|A9RQN3|A9RQN3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177351 PE=3 SV=1 Length = 105
Score = 176 bits (447), Expect = 4e-43 Identities = 84/101 (83%), Positives = 85/101 (84%) Frame = +1
Query: 28 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHK 207 MVNVP HTLHKVTQYKKGKDSLY QGKRRYDRKQSGYGGQTKPVFHK Sbjct: 1 MVNVPKTKKSFCPGKACKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 208 KAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 330 KAKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG Sbjct: 61 KAKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101
>tr|A9RD45|A9RD45_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_109414 PE=3 SV=1 Length = 105
Score = 176 bits (447), Expect = 4e-43 Identities = 84/101 (83%), Positives = 85/101 (84%) Frame = +1
Query: 28 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHK 207 MVNVP HTLHKVTQYKKGKDSLY QGKRRYDRKQSGYGGQTKPVFHK Sbjct: 1 MVNVPKTKKSFCPGKSCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 208 KAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 330 KAKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG Sbjct: 61 KAKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101
>tr|A9RFG1|A9RFG1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129054 PE=3 SV=1 Length = 105
Score = 174 bits (442), Expect = 2e-42 Identities = 83/100 (83%), Positives = 84/100 (84%) Frame = +1
Query: 31 VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHKK 210 VNVP HTLHKVTQYKKGKDSLY QGKRRYDRKQSGYGGQTKPVFHKK Sbjct: 2 VNVPKTKKSFCPGKACKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 211 AKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 330 AKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG Sbjct: 62 AKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101
>tr|A9PD13|A9PD13_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=3 SV=1 Length = 105
Score = 172 bits (437), Expect = 6e-42 Identities = 83/101 (82%), Positives = 84/101 (83%) Frame = +1
Query: 28 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHK 207 MVNVP HTLHKVTQYKKGKDSL QGKRRYDRKQSGYGGQTKPVFHK Sbjct: 1 MVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 208 KAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 330 KAKTTKKIVLRLQCQSCKHV+QHPIKRCKHFEIGGDKK KG Sbjct: 61 KAKTTKKIVLRLQCQSCKHVSQHPIKRCKHFEIGGDKKGKG 101
>tr|B8LKF1|B8LKF1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 105
Score = 171 bits (433), Expect = 2e-41 Identities = 82/101 (81%), Positives = 84/101 (83%) Frame = +1
Query: 28 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHK 207 MVNVP HTLHKVTQYKKGKDSL VQGKRRYDRKQSGYGGQTKPVFHK Sbjct: 1 MVNVPKTKKTFCKNKACKKHTLHKVTQYKKGKDSLAVQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 208 KAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 330 KAKTTKKIVL+LQCQSCKH +QHPIKRCKHFEIGGDKK KG Sbjct: 61 KAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>tr|Q00508|Q00508_CANMA Ribosomal protein L41 OS=Candida maltosa PE=3 SV=1 Length = 105
Score = 171 bits (433), Expect = 2e-41 Identities = 82/101 (81%), Positives = 83/101 (82%) Frame = +1
Query: 28 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHK 207 MVNVP HTLHKVTQYKKGKDSL QGKRRYDRKQSGYGGQTKPVFHK Sbjct: 1 MVNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 208 KAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 330 KAKTTKKIVLRLQCQ CKHV+QHPIKRCKHFEIGGDKK KG Sbjct: 61 KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 101
>tr|A7Q2A2|A7Q2A2_VITVI Chromosome chr13 scaffold_45, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028799001 PE=3 SV=1 Length = 115
Score = 170 bits (431), Expect = 3e-41 Identities = 82/104 (78%), Positives = 83/104 (79%) Frame = +1
Query: 19 PAAMVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPV 198 P VNVP HTLHKVTQYKKGKDSL QGKRRYDRKQSGYGGQTKPV Sbjct: 8 PQFSVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPV 67
Query: 199 FHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 330 FHKKAKTTKKIVLRLQCQ CKHV+QHPIKRCKHFEIGGDKK KG Sbjct: 68 FHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 111
>tr|Q8H5N0|Q8H5N0_ORYSJ Os07g0450000 protein OS=Oryza sativa subsp. japonica GN=OJ1047_A06.130 PE=3 SV=1 Length = 105
Score = 169 bits (429), Expect = 5e-41 Identities = 81/101 (80%), Positives = 83/101 (82%) Frame = +1
Query: 28 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHK 207 MVNVP HTLHKVTQYKKGKDSL QGKRRYDRKQSGYGGQTKPVFHK Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 208 KAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 330 KAKTTKKIVL+LQCQSCKH +QHPIKRCKHFEIGGDKK KG Sbjct: 61 KAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>tr|B6TXV2|B6TXV2_MAIZE 60S ribosomal protein L44 OS=Zea mays PE=4 SV=1 Length = 105
Score = 169 bits (429), Expect = 5e-41 Identities = 81/101 (80%), Positives = 83/101 (82%) Frame = +1
Query: 28 MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFHK 207 MVNVP HTLHKVTQYKKGKDSL QGKRRYDRKQSGYGGQTKPVFHK Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 208 KAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 330 KAKTTKKIVL+LQCQSCKH +QHPIKRCKHFEIGGDKK KG Sbjct: 61 KAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
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