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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949115
Clone id TST38A01NGRL0005_C01
Library
Length 546
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_C01. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
AGAAACCGCTGTCGTATGGTTTAGGACTGGAGTGATCCCACCTCTAGGAACCTACAACTA
CTGGGCAGATCCCTACACGCTATTCGTCCTTGAGATGGCCCTCATGGGCTTTGCTGAGCA
CCGAAGAGCACAGGATTATTATAAGCCTGGATCGATGGGAAAGCAGTATTTCTTAGGTTT
CGAGAAGGGTCTTGGAGGCTCTGGAGATGCCGCCTACCCTGGCGGTCTCTTCAACTTCCT
AGGCTTCGGGAAGGATGAGAAGTCGATGAAGGAATTGAAGGTGAAAGAGGTCAAGAATGG
CAGGCTTGCGATGCTTGCTATCCTAGGTTACTTTATTCAAGCTTTGGTCACTGGCAAGGG
TCCCTTCGAGAATTTACTTGACCATCTTGCAGACCCTGTCGGCAACAATCTCCTCACTAA
TCTCAAGATTTTGTGGTGATAGGAGTTGTTCCAAATTGCTTCCTTTTGTAACTATTGTGC
TTTTAAACGGCTATGTTTCTCTTGTGTATTTTTTGATCAAAAAAAAAAAAAAAAAAAAAA
ACCCAA
■■Homology search results ■■ -
sp_hit_id P27522
Definition sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum
Align length 143
Score (bit) 253.0
E-value 3.0e-67
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949115|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_C01, 5'
         (504 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   253   3e-67
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   245   1e-64
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...   103   5e-22
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...   102   8e-22
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...   102   1e-21
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   102   1e-21
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   102   1e-21
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...   102   1e-21
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   102   1e-21
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   101   2e-21
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   101   2e-21
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   100   3e-21
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   100   3e-21
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   100   3e-21
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   100   5e-21
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   100   7e-21
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   100   7e-21
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   100   7e-21
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   100   7e-21
sp|P10707|CB2D_SOLLC Chlorophyll a-b binding protein 1D (Fragmen...    99   9e-21
sp|P14275|CB2C_SOLLC Chlorophyll a-b binding protein 1C, chlorop...    99   9e-21
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...    99   9e-21
sp|P14274|CB2A_SOLLC Chlorophyll a-b binding protein 1A, chlorop...    99   9e-21
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...    99   9e-21
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...    99   9e-21
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    99   9e-21
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...    99   9e-21
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...    99   9e-21
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    99   9e-21
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...    99   1e-20

>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  253 bits (647), Expect = 3e-67
 Identities = 123/143 (86%), Positives = 132/143 (92%), Gaps = 1/143 (0%)
 Frame = +2

Query: 2   ETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGF 181
           ETA+ WF+TGVIPP GTYNYWAD YTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLG 
Sbjct: 129 ETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGL 188

Query: 182 EKGLGGSGDAAYPGG-LFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGK 358
           EKGLGGSGD AYPGG LFN LGFGKDEKSMKELK+KE+KNGRLAMLAILGYFIQALVTG 
Sbjct: 189 EKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGV 248

Query: 359 GPFENLLDHLADPVGNNLLTNLK 427
           GP++NLLDHLADPV NN+LT+LK
Sbjct: 249 GPYQNLLDHLADPVNNNVLTSLK 271


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  245 bits (625), Expect = 1e-64
 Identities = 118/143 (82%), Positives = 129/143 (90%), Gaps = 1/143 (0%)
 Frame = +2

Query: 2   ETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGF 181
           ETA+ WF+TGVIPP GTYNYWAD YTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLG 
Sbjct: 131 ETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGL 190

Query: 182 EKGLGGSGDAAYPGG-LFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGK 358
           EKG GGSG+ AYPGG  FN LGFGKDEKS+KELK+KEVKNGRLAMLAILGYFIQ LVTG 
Sbjct: 191 EKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGV 250

Query: 359 GPFENLLDHLADPVGNNLLTNLK 427
           GP++NLLDH+ADPV NN+LT+LK
Sbjct: 251 GPYQNLLDHVADPVNNNVLTSLK 273


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score =  103 bits (257), Expect = 5e-22
 Identities = 61/128 (47%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
 Frame = +2

Query: 47  GTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMG-----KQYFLGFEKGLGGSGDA 211
           G   Y+A   TLFV+E  L  + E RR QD   PGS+      KQY L         G+ 
Sbjct: 131 GKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP-------KGEV 183

Query: 212 AYPGGLFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGKGPFENLLDHLA 391
            YPGG+FN L F   +    E K KE+ NGRLAMLA LG+ +Q  VTGKGPFENLL HL+
Sbjct: 184 GYPGGIFNPLNFAPTQ----EAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLS 239

Query: 392 DPVGNNLL 415
           DP  N ++
Sbjct: 240 DPWHNTIV 247



 Score = 30.4 bits (67), Expect = 4.9
 Identities = 21/72 (29%), Positives = 30/72 (41%)
 Frame = +2

Query: 146 PGSMGKQYFLGFEKGLGGSGDAAYPGGLFNFLGFGKDEKSMKELKVKEVKNGRLAMLAIL 325
           PG     Y  G   G  G          F+ LG  +D +++K     E+ NGR AML + 
Sbjct: 59  PGLASPDYLTGSLAGDNG----------FDPLGLAEDPENLKWFVQAELVNGRWAMLGVA 108

Query: 326 GYFIQALVTGKG 361
           G  +  + T  G
Sbjct: 109 GMLLPEVFTKIG 120


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score =  102 bits (255), Expect = 8e-22
 Identities = 61/131 (46%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
 Frame = +2

Query: 47  GTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMG-----KQYFLGFEKGLGGSGDA 211
           G   Y+A   TLFV+E  L  + E RR QD   PGS+      KQY L        +G+ 
Sbjct: 130 GKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLP-------AGEV 182

Query: 212 AYPGGLFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGKGPFENLLDHLA 391
            YPGG+FN L F        E K KE+ NGRLAMLA LG+ IQ  VTGKGPF+NLL H++
Sbjct: 183 GYPGGIFNPLNFAPT----LEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHIS 238

Query: 392 DPVGNNLLTNL 424
           DP  N ++  L
Sbjct: 239 DPWHNTIVQTL 249


>sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1
          Length = 280

 Score =  102 bits (254), Expect = 1e-21
 Identities = 67/141 (47%), Positives = 82/141 (58%), Gaps = 6/141 (4%)
 Frame = +2

Query: 14  VWFRTGVIPPLG-TYNYWAD--PYTLF---VLEMALMGFAEHRRAQDYYKPGSMGKQYFL 175
           VWF+TG +   G T NY+    P  L    V E+ L+G AE+ R  +            L
Sbjct: 146 VWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNG-----------L 194

Query: 176 GFEKGLGGSGDAAYPGGLFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTG 355
            FE       D  +PGG F+ LG  KD +    LKVKE+KNGRLAM A+LG+FIQA VTG
Sbjct: 195 DFE-------DKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTG 247

Query: 356 KGPFENLLDHLADPVGNNLLT 418
           +GP ENL  HL+DP GNNLLT
Sbjct: 248 EGPVENLAKHLSDPFGNNLLT 268


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  102 bits (253), Expect = 1e-21
 Identities = 61/141 (43%), Positives = 80/141 (56%), Gaps = 9/141 (6%)
 Frame = +2

Query: 14  VWFRTGV-IPPLGTYNYWADP--------YTLFVLEMALMGFAEHRRAQDYYKPGSMGKQ 166
           VWF+ G  I   G  +Y  +P          ++ +++ LMGF E  R       G +G+ 
Sbjct: 127 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGG----GPLGE- 181

Query: 167 YFLGFEKGLGGSGDAAYPGGLFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQAL 346
                  GL    D  YPGG F+ LG   D  +  ELKVKE+KNGRLAM ++ G+F+QA+
Sbjct: 182 -------GL----DKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAI 230

Query: 347 VTGKGPFENLLDHLADPVGNN 409
           VTGKGP ENL DH+ADPV NN
Sbjct: 231 VTGKGPIENLFDHVADPVANN 251


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  102 bits (253), Expect = 1e-21
 Identities = 61/141 (43%), Positives = 80/141 (56%), Gaps = 9/141 (6%)
 Frame = +2

Query: 14  VWFRTGV-IPPLGTYNYWADP--------YTLFVLEMALMGFAEHRRAQDYYKPGSMGKQ 166
           VWF+ G  I   G  +Y  +P          ++ +++ LMGF E  R       G +G+ 
Sbjct: 127 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGG----GPLGE- 181

Query: 167 YFLGFEKGLGGSGDAAYPGGLFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQAL 346
                  GL    D  YPGG F+ LG   D  +  ELKVKE+KNGRLAM ++ G+F+QA+
Sbjct: 182 -------GL----DKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAI 230

Query: 347 VTGKGPFENLLDHLADPVGNN 409
           VTGKGP ENL DH+ADPV NN
Sbjct: 231 VTGKGPIENLFDHVADPVANN 251


>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1,
           chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1
          Length = 266

 Score =  102 bits (253), Expect = 1e-21
 Identities = 60/141 (42%), Positives = 78/141 (55%), Gaps = 9/141 (6%)
 Frame = +2

Query: 14  VWFRTGV-IPPLGTYNYWADP--------YTLFVLEMALMGFAEHRRAQDYYKPGSMGKQ 166
           VWF+ G  I   G  +Y  +P          ++  ++ LMG  E                
Sbjct: 129 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEG--------------- 173

Query: 167 YFLGFEKGLGGSGDAAYPGGLFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQAL 346
           Y +  E  LG + D  YPGG F+ LG   D ++  ELKVKE+KNGRLAM ++ G+F+QA+
Sbjct: 174 YRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 233

Query: 347 VTGKGPFENLLDHLADPVGNN 409
           VTGKGP ENL DHLADPV NN
Sbjct: 234 VTGKGPLENLADHLADPVNNN 254


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  102 bits (253), Expect = 1e-21
 Identities = 62/141 (43%), Positives = 79/141 (56%), Gaps = 9/141 (6%)
 Frame = +2

Query: 14  VWFRTGV-IPPLGTYNYWADP--------YTLFVLEMALMGFAEHRRAQDYYKPGSMGKQ 166
           VWF+ G  I   G  +Y  +P          ++  ++ LMGF E  R       G +G+ 
Sbjct: 129 VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGG----GPLGE- 183

Query: 167 YFLGFEKGLGGSGDAAYPGGLFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQAL 346
                  GL    D  YPGG F+ LG   D  +  ELKVKE+KNGRLAM ++ G+F+QA+
Sbjct: 184 -------GL----DPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAI 232

Query: 347 VTGKGPFENLLDHLADPVGNN 409
           VTGKGP ENL DHLADPV NN
Sbjct: 233 VTGKGPIENLFDHLADPVANN 253


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  101 bits (252), Expect = 2e-21
 Identities = 57/119 (47%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
 Frame = +2

Query: 47  GTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGSGDAAYPGG 226
           G   Y+ D  TLFV+E+ L+G+AE RR  D  KPG +         K  G   D  YPGG
Sbjct: 142 GEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPGG 199

Query: 227 L-FNFLGFGKDEKS-MKELKVKEVKNGRLAMLAILGYFIQALVTGKGPFENLLDHLADP 397
           L F+ LG+G    + +KEL+ KE+KNGRLAMLA++G + Q + TG GP +NL  HLADP
Sbjct: 200 LWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258



 Score = 32.0 bits (71), Expect = 1.7
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +2

Query: 206 DAAYPGGL-FNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGKG 361
           D + PG   F+ LG G D +S+K     E+ + R AML   G FI   +T  G
Sbjct: 79  DGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIG 131
tr_hit_id A9TB65
Definition tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 144
Score (bit) 252.0
E-value 8.0e-66
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949115|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_C01, 5'
         (504 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment) OS=Physcomit...   252   8e-66
tr|A9U226|A9U226_PHYPA Predicted protein (Fragment) OS=Physcomit...   251   1e-65
tr|A9TEM8|A9TEM8_PHYPA Predicted protein OS=Physcomitrella paten...   251   1e-65
tr|A9TEM7|A9TEM7_PHYPA Predicted protein (Fragment) OS=Physcomit...   251   1e-65
tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea...   251   2e-65
tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein ...   251   2e-65
tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein...   250   2e-65
tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein ...   249   4e-65
tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Popul...   248   2e-64
tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Popul...   247   2e-64
tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding prot...   244   2e-63
tr|Q43381|Q43381_ARATH PSI type III chlorophyll a/b-binding prot...   244   2e-63
tr|Q2V2R9|Q2V2R9_ARATH Uncharacterized protein At1g61520.2 OS=Ar...   244   2e-63
tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding prot...   241   1e-62
tr|Q6Y0E5|Q6Y0E5_VITVI Chlorophyll a/b binding protein (Fragment...   238   9e-62
tr|B6T4Y7|B6T4Y7_MAIZE Chlorophyll a-b binding protein 8 OS=Zea ...   238   9e-62
tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea ...   238   9e-62
tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome...   238   9e-62
tr|Q9M538|Q9M538_ALOME Chlorophyll a/b-binding protein type III ...   238   2e-61
tr|Q8LCR7|Q8LCR7_ARATH PSI type III chlorophyll a/b-binding prot...   237   3e-61
tr|Q6H748|Q6H748_ORYSJ Os02g0197600 protein OS=Oryza sativa subs...   223   4e-57
tr|A6N105|A6N105_ORYSI Chloroplast chlorophyll a-b binding prote...   223   4e-57
tr|A6N104|A6N104_ORYSI Chloroplast chlorophyll a-b binding prote...   223   4e-57
tr|A2X218|A2X218_ORYSI Putative uncharacterized protein OS=Oryza...   223   4e-57
tr|A4QPL5|A4QPL5_MESVI Chloroplast light-harvesting complex I pr...   201   1e-50
tr|A2SY14|A2SY14_MESVI Light-harvesting chlorophyll-a/b binding ...   201   1e-50
tr|Q75VY9|Q75VY9_CHLRE Light-harvesting chlorophyll-a/b protein ...   195   1e-48
tr|A8JF10|A8JF10_CHLRE Light-harvesting chlorophyll-a/b protein ...   195   1e-48
tr|A2SY38|A2SY38_CHLIN Light-harvesting chlorophyll-a/b binding ...   193   4e-48
tr|A3F4K0|A3F4K0_BRAJU Chloroplast PSI type III chlorophyll a/b-...   182   1e-44

>tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_142913 PE=4 SV=1
          Length = 227

 Score =  252 bits (643), Expect = 8e-66
 Identities = 117/144 (81%), Positives = 134/144 (93%), Gaps = 1/144 (0%)
 Frame = +2

Query: 2   ETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGF 181
           ETA+ WF++GVIPP+G Y+YWADPYTLFVLE+ALMGFAEHRRAQDYYKPGSMGKQYFLG 
Sbjct: 83  ETAIPWFQSGVIPPVGNYSYWADPYTLFVLELALMGFAEHRRAQDYYKPGSMGKQYFLGL 142

Query: 182 EKGLGGSGDAAYPGG-LFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGK 358
           EK LGGSG+ AYPGG +FNFLGFGK+EK +KELK+KE+KNGRLAM+A+LGYFIQA+ TG 
Sbjct: 143 EKFLGGSGNPAYPGGPIFNFLGFGKNEKELKELKLKEIKNGRLAMMAVLGYFIQAIFTGV 202

Query: 359 GPFENLLDHLADPVGNNLLTNLKI 430
           GPF+NLLDHLADPV NN+LTNLKI
Sbjct: 203 GPFQNLLDHLADPVHNNVLTNLKI 226


>tr|A9U226|A9U226_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_154531 PE=4 SV=1
          Length = 224

 Score =  251 bits (641), Expect = 1e-65
 Identities = 118/144 (81%), Positives = 133/144 (92%), Gaps = 1/144 (0%)
 Frame = +2

Query: 2   ETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGF 181
           ETA+ WF++GVIPP+G Y+YWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 
Sbjct: 80  ETAIPWFQSGVIPPVGNYSYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGL 139

Query: 182 EKGLGGSGDAAYPGG-LFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGK 358
           EK LGGSG+ AYPGG +FNFLGFGK+EK ++ELKVKEVKNGRLAM+A+LGYF QA+ TG 
Sbjct: 140 EKFLGGSGNPAYPGGPIFNFLGFGKNEKELQELKVKEVKNGRLAMMAVLGYFTQAIFTGV 199

Query: 359 GPFENLLDHLADPVGNNLLTNLKI 430
           GPF+NLLDHLADPV NN+LTNLKI
Sbjct: 200 GPFQNLLDHLADPVHNNVLTNLKI 223


>tr|A9TEM8|A9TEM8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_60069 PE=4 SV=1
          Length = 242

 Score =  251 bits (641), Expect = 1e-65
 Identities = 118/144 (81%), Positives = 133/144 (92%), Gaps = 1/144 (0%)
 Frame = +2

Query: 2   ETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGF 181
           ETA+ WF++GVIPP+G Y+YWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 
Sbjct: 98  ETAIPWFQSGVIPPVGNYSYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGL 157

Query: 182 EKGLGGSGDAAYPGG-LFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGK 358
           EK LGGSG+ AYPGG +FNFLGFGK+EK ++ELKVKEVKNGRLAM+A+LGYF QA+ TG 
Sbjct: 158 EKFLGGSGNPAYPGGPIFNFLGFGKNEKELQELKVKEVKNGRLAMMAVLGYFTQAIFTGV 217

Query: 359 GPFENLLDHLADPVGNNLLTNLKI 430
           GPF+NLLDHLADPV NN+LTNLKI
Sbjct: 218 GPFQNLLDHLADPVHNNVLTNLKI 241


>tr|A9TEM7|A9TEM7_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_144392 PE=4 SV=1
          Length = 224

 Score =  251 bits (641), Expect = 1e-65
 Identities = 118/144 (81%), Positives = 133/144 (92%), Gaps = 1/144 (0%)
 Frame = +2

Query: 2   ETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGF 181
           ETA+ WF++GVIPP+G Y+YWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 
Sbjct: 80  ETAIPWFQSGVIPPVGNYSYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGL 139

Query: 182 EKGLGGSGDAAYPGG-LFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGK 358
           EK LGGSG+ AYPGG +FNFLGFGK+EK ++ELKVKEVKNGRLAM+A+LGYF QA+ TG 
Sbjct: 140 EKFLGGSGNPAYPGGPIFNFLGFGKNEKELQELKVKEVKNGRLAMMAVLGYFTQAIFTGV 199

Query: 359 GPFENLLDHLADPVGNNLLTNLKI 430
           GPF+NLLDHLADPV NN+LTNLKI
Sbjct: 200 GPFQNLLDHLADPVHNNVLTNLKI 223


>tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 289

 Score =  251 bits (640), Expect = 2e-65
 Identities = 123/144 (85%), Positives = 131/144 (90%), Gaps = 1/144 (0%)
 Frame = +2

Query: 2   ETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGF 181
           ETA+ WFRTGVIPP GTY+YWADP+TLFVLEMALMGFAEHRR QDY  PGSM KQYFLGF
Sbjct: 144 ETALPWFRTGVIPPAGTYDYWADPFTLFVLEMALMGFAEHRRLQDYRYPGSMSKQYFLGF 203

Query: 182 EKGLGGSGDAAYPGG-LFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGK 358
           EK LGGSG+ +YPGG LFN LGFGKDEKSMKELK+KEVKNGRLAMLAI+GYFIQ LVTG 
Sbjct: 204 EKYLGGSGNPSYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAIVGYFIQGLVTGV 263

Query: 359 GPFENLLDHLADPVGNNLLTNLKI 430
           GPF+NLLDHLADPV NNLLTNLKI
Sbjct: 264 GPFQNLLDHLADPVNNNLLTNLKI 287


>tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  251 bits (640), Expect = 2e-65
 Identities = 122/143 (85%), Positives = 132/143 (92%), Gaps = 1/143 (0%)
 Frame = +2

Query: 2   ETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGF 181
           ETA+ WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLGF
Sbjct: 131 ETALPWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGF 190

Query: 182 EKGLGGSGDAAYPGG-LFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGK 358
           EK LGGSGD AYPGG +FN LGFGKDEKSMKELK+KEVKNGRLAMLAILG+FIQ LVTG 
Sbjct: 191 EKFLGGSGDPAYPGGPIFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGFFIQGLVTGV 250

Query: 359 GPFENLLDHLADPVGNNLLTNLK 427
           GPF+NLLDHLADPV NN+LT+LK
Sbjct: 251 GPFQNLLDHLADPVNNNVLTSLK 273


>tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein
           OS=Pinus sylvestris GN=lhaC1 PE=2 SV=1
          Length = 286

 Score =  250 bits (639), Expect = 2e-65
 Identities = 122/144 (84%), Positives = 130/144 (90%), Gaps = 1/144 (0%)
 Frame = +2

Query: 2   ETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGF 181
           ETA+ WF+TGVIPP GTYNYWADP+TLFVLEMALMGFAEHRR QDY  PGSMGKQYFLG 
Sbjct: 142 ETALPWFQTGVIPPAGTYNYWADPFTLFVLEMALMGFAEHRRLQDYRNPGSMGKQYFLGL 201

Query: 182 EKGLGGSGDAAYPGG-LFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGK 358
           EK LGGSG+ AYPGG LFN LGFGKDEKSMKELK+KEVKNGRLAMLAILGYFIQ LVTG 
Sbjct: 202 EKFLGGSGNPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFIQGLVTGV 261

Query: 359 GPFENLLDHLADPVGNNLLTNLKI 430
           GPF+NLLDHLADPV NN LTN+K+
Sbjct: 262 GPFQNLLDHLADPVHNNFLTNMKL 285


>tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  249 bits (637), Expect = 4e-65
 Identities = 121/143 (84%), Positives = 132/143 (92%), Gaps = 1/143 (0%)
 Frame = +2

Query: 2   ETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGF 181
           ETA+ WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLGF
Sbjct: 131 ETALPWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGF 190

Query: 182 EKGLGGSGDAAYPGG-LFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGK 358
           EK LGGSGD AYPGG +FN LGFGKDE+SMKELK+KEVKNGRLAMLAILG+FIQ LVTG 
Sbjct: 191 EKFLGGSGDPAYPGGPIFNPLGFGKDERSMKELKLKEVKNGRLAMLAILGFFIQGLVTGV 250

Query: 359 GPFENLLDHLADPVGNNLLTNLK 427
           GPF+NLLDHLADPV NN+LT+LK
Sbjct: 251 GPFQNLLDHLADPVNNNVLTSLK 273


>tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 274

 Score =  248 bits (632), Expect = 2e-64
 Identities = 119/143 (83%), Positives = 131/143 (91%), Gaps = 1/143 (0%)
 Frame = +2

Query: 2   ETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGF 181
           ETA+ WFRTGVIPP GTY+YWADPYTLFV EMALMGFAEHRR QD+ KPGSMGKQYFLGF
Sbjct: 130 ETALPWFRTGVIPPAGTYSYWADPYTLFVFEMALMGFAEHRRLQDWAKPGSMGKQYFLGF 189

Query: 182 EKGLGGSGDAAYPGG-LFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGK 358
           EK LGGSG+ AYPGG LFN LGFGKDEKS+K+LK+KEVKNGRLAMLAILGYF+Q LVTG 
Sbjct: 190 EKYLGGSGEPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGV 249

Query: 359 GPFENLLDHLADPVGNNLLTNLK 427
           GP++NLLDHLADPV NN+LT+LK
Sbjct: 250 GPYQNLLDHLADPVHNNILTSLK 272


>tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 274

 Score =  247 bits (631), Expect = 2e-64
 Identities = 119/143 (83%), Positives = 131/143 (91%), Gaps = 1/143 (0%)
 Frame = +2

Query: 2   ETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGF 181
           ETA+ WFRTGVIPP GTY+YWADPYTLFV EMALMGFAEHRR QD+ KPGSMGKQYFLGF
Sbjct: 130 ETALPWFRTGVIPPAGTYSYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGF 189

Query: 182 EKGLGGSGDAAYPGG-LFNFLGFGKDEKSMKELKVKEVKNGRLAMLAILGYFIQALVTGK 358
           EK LGGSG+ AYPGG LFN LGFGKDEKS+K+LK+KEVKNGRLAMLAILGYF+Q LVTG 
Sbjct: 190 EKYLGGSGEPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGV 249

Query: 359 GPFENLLDHLADPVGNNLLTNLK 427
           GP++NLLDHLADPV NN+LT+LK
Sbjct: 250 GPYQNLLDHLADPVHNNILTSLK 272