DK949129 |
Clone id |
TST38A01NGRL0005_C15 |
Library |
TST38 |
Length |
701 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_C15. 5' end sequence. |
Accession |
DK949129 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL72Contig2 |
Sequence |
CTGTTTTTCGGCATCTTCAGAGTCGACCAAAAGGCTCAGAAGGAAGCGAGTCCAGTGTTT GCAAGACATCTTAATTCTCCTCCTTTGCCACTTAGCTCCATGGATTGCACATTTGCGGCG CAGGCCTCTCCGCAAACAGCTGCGGCTCCCCTAGCAGCCCTCTCACACAAGTCTTCTGTT CAGATCCCGCGGGGGGCTCTCCGCTCAAACTTCTGTGTGCAGACAGGTCTTTTAAAGTTG GATATTCAGAGAGGGATAAAGTCAAGGTTGAGGAGAAACAGGGGCAGTGTCAAGTTGGCA GTTGTTAGAGCAAGTGGTGATACTCAAGATAGTGGGTCTCCGATAGCTCCGTTCCAGCCA GAGTCTCCTACCGGTCAGTACTTGGCACAGCTTCTTCAAAGCCATCCCCATCTTGTTCCT GCTGCTGTTGAGCAAGAGCTTGAGAAGCTTGCTGAGAATCGTACTTTGCAGGATTCTTCC ACTGAGCCTAGCTCAAAGGGTTCCGAGCTTGTCCTCTACAGACGGATTGCTGAGCTCAAA GAGCAGGAAAGGCAAAGAGCATTGGAAGAGATAATCTACACCCTCATTGTTCAGAAGTTT GTAGGATCAGGCATTTCCATGGTACCCAACCTTGAGTCAATAACGTCACTCGAGAAGCTG TGGCAGATTCANGTGAAAGAGCTGGAGGCTGTGCACTCTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8BI22 |
Definition |
sp|Q8BI22|CN145_MOUSE Uncharacterized protein C14orf145 homolog OS=Mus musculus |
Align length |
128 |
Score (bit) |
35.8 |
E-value |
0.23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPW2 |
Definition |
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
148 |
Score (bit) |
139.0 |
E-value |
1.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949129|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_C15, 5' (701 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 139 1e-31 tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 139 2e-31 tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 130 8e-29 tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 130 8e-29 tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 130 8e-29 tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 129 1e-28 tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 128 4e-28 tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Ar... 128 4e-28 tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 122 2e-26 tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 122 2e-26 tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 120 6e-26 tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 120 8e-26 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 119 1e-25 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 119 1e-25 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 119 1e-25 tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 117 7e-25 tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 116 1e-24 tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 115 2e-24 tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 111 4e-23 tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (... 107 1e-21 tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 102 2e-20 tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 102 2e-20 tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 102 2e-20 tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 100 2e-19 tr|B6TD75|B6TD75_MAIZE Putative uncharacterized protein OS=Zea m... 89 2e-16 tr|B8LKC1|B8LKC1_PICSI Putative uncharacterized protein OS=Picea... 89 3e-16 tr|A4S3L6|A4S3L6_OSTLU Predicted protein OS=Ostreococcus lucimar... 89 3e-16 tr|Q2R4Y4|Q2R4Y4_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 88 6e-16 tr|Q2R4Y3|Q2R4Y3_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 88 6e-16 tr|A2ZDY7|A2ZDY7_ORYSI Putative uncharacterized protein OS=Oryza... 88 6e-16
>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 434
Score = 139 bits (351), Expect = 1e-31 Identities = 77/148 (52%), Positives = 100/148 (67%), Gaps = 3/148 (2%) Frame = +1
Query: 265 RLRRNRGSVKLAVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELE 444 R RRN G VRA+G+ +S PIAP Q ESPTGQ+L+QLL+ HPHL+PAAVEQ+LE Sbjct: 74 RSRRNFG------VRAAGNYDESSKPIAPLQLESPTGQFLSQLLKDHPHLLPAAVEQQLE 127
Query: 445 KLAENRTLQDSSTEPSSKGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMV 624 +L +R PSS +ELVLYRRIAE+K ER++ALEEI+Y LIVQKF+ + IS++ Sbjct: 128 RLVADRDAAAQQDPPSSTSTELVLYRRIAEVKAAERRKALEEIMYALIVQKFMDARISLI 187
Query: 625 PNL---ESITSLEKLWQIXVKELEAVHS 699 P + + +T W +LE VHS Sbjct: 188 PCISMPDPVTGQIDTWPKQDHKLEGVHS 215
>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006608001 PE=4 SV=1 Length = 362
Score = 139 bits (350), Expect = 2e-31 Identities = 74/145 (51%), Positives = 99/145 (68%), Gaps = 6/145 (4%) Frame = +1
Query: 283 GSVKLAVVRASGDTQDSGS--PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAE 456 G K +VRAS SGS PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L Sbjct: 4 GCKKCTIVRASASADSSGSAAPIAPLQLESPIGQFLSQILISHPHLVPAAVEQQLEQLQT 63
Query: 457 NRTLQDSSTEPSSKGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNLE 636 +R ++ E S+ G+ELVLYRRIAE+K ER++ALEEI+Y L+VQKF+ + +S++P + Sbjct: 64 DRDAEEHKEESSASGTELVLYRRIAEVKANERKKALEEILYALVVQKFMDANVSLIPTIS 123
Query: 637 SITSLEK----LWQIXVKELEAVHS 699 S +S W +LE +HS Sbjct: 124 SSSSDSSDRVDTWPSQDGKLEQLHS 148
>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 130 bits (327), Expect = 8e-29 Identities = 71/142 (50%), Positives = 99/142 (69%), Gaps = 9/142 (6%) Frame = +1
Query: 301 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 465 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 466 LQDSSTEPSS-KGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNLESI 642 Q + + +S G+++VLYRRIAELKE ER+R LEEI+Y L+VQKF+ + +S+VP++ Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEILYALVVQKFMEANVSLVPSVSPS 192
Query: 643 TSLE---KLWQIXVKELEAVHS 699 + W V++LE +HS Sbjct: 193 SDPSGRVDTWPTKVEKLERLHS 214
>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800; MEB5.2 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1 Length = 421
Score = 130 bits (327), Expect = 8e-29 Identities = 71/142 (50%), Positives = 99/142 (69%), Gaps = 9/142 (6%) Frame = +1
Query: 301 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 465 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 466 LQDSSTEPSS-KGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNLESI 642 Q + + +S G+++VLYRRIAELKE ER+R LEEI+Y L+VQKF+ + +S+VP++ Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEILYALVVQKFMEANVSLVPSVSPS 192
Query: 643 TSLE---KLWQIXVKELEAVHS 699 + W V++LE +HS Sbjct: 193 SDPSGRVDTWPTKVEKLERLHS 214
>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800 OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 130 bits (327), Expect = 8e-29 Identities = 71/142 (50%), Positives = 99/142 (69%), Gaps = 9/142 (6%) Frame = +1
Query: 301 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 465 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 466 LQDSSTEPSS-KGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNLESI 642 Q + + +S G+++VLYRRIAELKE ER+R LEEI+Y L+VQKF+ + +S+VP++ Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEILYALVVQKFMEANVSLVPSVSPS 192
Query: 643 TSLE---KLWQIXVKELEAVHS 699 + W V++LE +HS Sbjct: 193 SDPSGRVDTWPTKVEKLERLHS 214
>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 417
Score = 129 bits (325), Expect = 1e-28 Identities = 70/148 (47%), Positives = 99/148 (66%), Gaps = 9/148 (6%) Frame = +1
Query: 283 GSVKLAVVRASGDTQDSGS----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKL 450 GS + VRAS + S PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L Sbjct: 59 GSRRCMAVRASSSSSSDSSGSIVPIAPLQLESPIGQFLSQILVSHPHLVPAAVEQQLEQL 118
Query: 451 AENRTLQDSSTEPSSKGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPN 630 +R + +PS+ G++LVLYRRIAE K +R++ALEEI+Y L+VQKF+ + +S++P Sbjct: 119 QTDRDSEKQKEDPSATGTDLVLYRRIAEAKANDRRKALEEILYALVVQKFMDANVSLIPT 178
Query: 631 L-----ESITSLEKLWQIXVKELEAVHS 699 + ES ++ W ++LE +HS Sbjct: 179 IGPSSAESSGQVD-TWPSQDEKLEQLHS 205
>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana GN=At1g48450 PE=2 SV=1 Length = 423
Score = 128 bits (321), Expect = 4e-28 Identities = 69/138 (50%), Positives = 98/138 (71%), Gaps = 5/138 (3%) Frame = +1
Query: 301 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 480 VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 481 TEPSS-KGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNLESITS--- 648 + SS G+++VLYRRIAE+KE+ER+RALEEI+Y L+VQKF+ + +++VP++ S ++ Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKERRRALEEILYALVVQKFMDANVTLVPSITSSSADPS 188
Query: 649 -LEKLWQIXVKELEAVHS 699 W ELE +HS Sbjct: 189 GRVDTWPTLDGELERLHS 206
>tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Arabidopsis thaliana GN=At1g48450 PE=4 SV=1 Length = 342
Score = 128 bits (321), Expect = 4e-28 Identities = 69/138 (50%), Positives = 98/138 (71%), Gaps = 5/138 (3%) Frame = +1
Query: 301 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 480 VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 481 TEPSS-KGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNLESITS--- 648 + SS G+++VLYRRIAE+KE+ER+RALEEI+Y L+VQKF+ + +++VP++ S ++ Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKERRRALEEILYALVVQKFMDANVTLVPSITSSSADPS 188
Query: 649 -LEKLWQIXVKELEAVHS 699 W ELE +HS Sbjct: 189 GRVDTWPTLDGELERLHS 206
>tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015667001 PE=4 SV=1 Length = 403
Score = 122 bits (307), Expect = 2e-26 Identities = 68/140 (48%), Positives = 94/140 (67%), Gaps = 3/140 (2%) Frame = +1
Query: 289 VKLAVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTL 468 V+ VRAS ++ D P+AP Q ESP GQ LAQ+LQ+HPHL+PAA++Q+LE L +R Sbjct: 60 VRGLTVRASVNSDDELVPVAPLQLESPIGQLLAQILQTHPHLLPAAIDQQLENLQTDRDA 119
Query: 469 QDSSTEPSSKGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNLESIT- 645 Q T PSS +L+LY RIA ++E+ERQ+ LEEI+Y LIVQKFV ISM+P + + + Sbjct: 120 QREETPPSS--HDLLLY-RIAAVREKERQKVLEEILYCLIVQKFVDKNISMIPKISATSD 176
Query: 646 --SLEKLWQIXVKELEAVHS 699 W ++LE++HS Sbjct: 177 PVGRVDFWPNQEQKLESIHS 196
>tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 401
Score = 122 bits (306), Expect = 2e-26 Identities = 59/114 (51%), Positives = 85/114 (74%) Frame = +1
Query: 298 AVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDS 477 A + +S D+ S + IAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R + Sbjct: 68 ASLSSSSDSSGSIASIAPLQLESPVGQFLSQILISHPHLVPAAVEQQLEQLQTDRDAEKQ 127
Query: 478 STEPSSKGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNLES 639 EPS+ ++LVLYR+IAE+K ER++ALEEI+Y L+VQKF+ + +S++ + S Sbjct: 128 KEEPSATSTDLVLYRKIAEVKANERRKALEEILYALVVQKFMDANVSLISTMAS 181
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