DK949138 |
Clone id |
TST38A01NGRL0005_C24 |
Library |
TST38 |
Length |
676 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_C24. 5' end sequence. |
Accession |
DK949138 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1723Contig1 |
Sequence |
AGCCGGCAAATTCTGGGTGATGTTTGCGATTGTCAATTTGTCGCAGGGGAAGTGAAAGCG TATCCCAACGATGGACTCGCTGTGTTTTCAAGTCTCTCATCCCTTGCAGGCTCGGTCGCC CCCATTGAACCAATCGCTGTTCTTTGCTCCACCCATCTCTCCTCTCTCTTCGTCCTCCTC ATTTCTCTTCATAAAAAGCCCGAAATACTACACGCTTACTGCAAGGGCGAAGAGAGACAA CTCCAAGCAGGAAGCCGCTCCAACAGCGGCTGCAGACAAAGGCAAGTCACCTGCCACTGC TAAAGAGGAGGATGAAGAGTATGAAGAGGTTGAGATTCCATGGCTTCAAGAAAAAGCAGA GACTTTATATGAGAATGTTGGAGTTGCAGTAAATGCCATACCAGGTCCAAGAGTTGGCAG CACATCACTTCCATGGCTTCTTGCAGCCCCCATTGGCTACCTCGGCATCACCTTTGTAAT TGCGGTAGTGAAGACCGTGCTCAAGTATAGCTCCCCCAAAGCTAAAAGGCGTCGCCGAGT GGACCAAAATCTATTCTTGTGCACATCAATTGATGAGGTTTTTGCTTCAAGCAGATCTGA TTTGGATAGCAAGGAGCTAAACTCATTGAAAAGCAAGACAGGTTTTACAACACATGAGAT TTTGCGGAAGTACATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A5DDB7 |
Definition |
sp|A5DDB7|BYE1_PICGU Transcription factor BYE1 OS=Pichia guilliermondii |
Align length |
40 |
Score (bit) |
33.1 |
E-value |
1.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9FNN4 |
Definition |
tr|Q9FNN4|Q9FNN4_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAH20 OS=Arabidopsis thaliana |
Align length |
157 |
Score (bit) |
136.0 |
E-value |
1.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949138|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_C24, 5' (676 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9FNN4|Q9FNN4_ARATH Arabidopsis thaliana genomic DNA, chromos... 136 1e-30 tr|Q93VT6|Q93VT6_ARATH Putative uncharacterized protein At5g0854... 136 1e-30 tr|Q8LCU2|Q8LCU2_ARATH Putative uncharacterized protein OS=Arabi... 135 2e-30 tr|Q7XKI6|Q7XKI6_ORYSJ Os04g0527800 protein OS=Oryza sativa subs... 134 4e-30 tr|Q01HN9|Q01HN9_ORYSA OSIGBa0115K01-H0319F09.13 protein OS=Oryz... 134 4e-30 tr|B8ASC1|B8ASC1_ORYSI Putative uncharacterized protein OS=Oryza... 134 4e-30 tr|A3AVR8|A3AVR8_ORYSJ Putative uncharacterized protein OS=Oryza... 134 4e-30 tr|A7QNP1|A7QNP1_VITVI Chromosome undetermined scaffold_133, who... 131 3e-29 tr|A9TBF4|A9TBF4_PHYPA Predicted protein (Fragment) OS=Physcomit... 125 2e-27 tr|A5BDZ0|A5BDZ0_VITVI Putative uncharacterized protein OS=Vitis... 119 2e-25 tr|Q00VM5|Q00VM5_OSTTA RNA-binding protein RBM5 and related prot... 48 7e-04 tr|A4SBH3|A4SBH3_OSTLU Predicted protein (Fragment) OS=Ostreococ... 45 0.003 tr|A7EPQ5|A7EPQ5_SCLS1 Putative uncharacterized protein OS=Scler... 35 3.3 tr|A4WK74|A4WK74_PYRAR Sulfite reductase, dissimilatory-type bet... 34 7.4 tr|Q5YJI0|Q5YJI0_SHEEP CD80/B7-1 transmembrane form OS=Ovis arie... 34 9.7 tr|A3MW48|A3MW48_PYRCJ Sulfite reductase, dissimilatory-type bet... 34 9.7
>tr|Q9FNN4|Q9FNN4_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAH20 OS=Arabidopsis thaliana PE=4 SV=1 Length = 471
Score = 136 bits (342), Expect = 1e-30 Identities = 74/157 (47%), Positives = 97/157 (61%) Frame = +2
Query: 206 YYTLTARAKRDNSKQEAAPTAAADKGKSPATAKXXXXXXXXXXIPWLQEKAETLYENVGV 385 + +++A A + S+ APT AA K S + +PW+QEKA L E G Sbjct: 146 HISISAAAPKKKSETVTAPTPAAKKNSS---VEEETEEEVEEDMPWIQEKALDLVEFTGS 202
Query: 386 AVNAIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSSPKAKRRRRVDQNLFLCT 565 AIPGPRVGS+ LPW+LA P+ Y G+TFV A VKTV K+SSPKA+R++ V+QN LC Sbjct: 203 VSQAIPGPRVGSSKLPWMLAVPLAYAGVTFVTAFVKTVQKFSSPKAQRKKLVNQNAMLCR 262
Query: 566 SIDEVFASSRSDLDSKELNSLKSKTGFTTHEILRKYI 676 SIDE+ + + S EL +L+ KT F EILRKYI Sbjct: 263 SIDELLRKA-GTVHSSELKALEQKTEFNMEEILRKYI 298
>tr|Q93VT6|Q93VT6_ARATH Putative uncharacterized protein At5g08540 OS=Arabidopsis thaliana GN=At5g08540 PE=2 SV=1 Length = 346
Score = 136 bits (342), Expect = 1e-30 Identities = 74/157 (47%), Positives = 97/157 (61%) Frame = +2
Query: 206 YYTLTARAKRDNSKQEAAPTAAADKGKSPATAKXXXXXXXXXXIPWLQEKAETLYENVGV 385 + +++A A + S+ APT AA K S + +PW+QEKA L E G Sbjct: 44 HISISAAAPKKKSETVTAPTPAAKKNSS---VEEETEEEVEEDMPWIQEKALDLVEFTGS 100
Query: 386 AVNAIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSSPKAKRRRRVDQNLFLCT 565 AIPGPRVGS+ LPW+LA P+ Y G+TFV A VKTV K+SSPKA+R++ V+QN LC Sbjct: 101 VSQAIPGPRVGSSKLPWMLAVPLAYAGVTFVTAFVKTVQKFSSPKAQRKKLVNQNAMLCR 160
Query: 566 SIDEVFASSRSDLDSKELNSLKSKTGFTTHEILRKYI 676 SIDE+ + + S EL +L+ KT F EILRKYI Sbjct: 161 SIDELLRKA-GTVHSSELKALEQKTEFNMEEILRKYI 196
>tr|Q8LCU2|Q8LCU2_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 346
Score = 135 bits (341), Expect = 2e-30 Identities = 74/157 (47%), Positives = 96/157 (61%) Frame = +2
Query: 206 YYTLTARAKRDNSKQEAAPTAAADKGKSPATAKXXXXXXXXXXIPWLQEKAETLYENVGV 385 + +++A A + S+ APT AA K S + +PW+QEKA L E G Sbjct: 44 HISISAAAPKKQSETVTAPTPAAKKNSS---VEEETEEEVEEDMPWIQEKALDLVEFTGS 100
Query: 386 AVNAIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSSPKAKRRRRVDQNLFLCT 565 AIPGPRVGS+ LPW+LA P+ Y G+TFV A VKTV K+SSPKA+R++ V+QN LC Sbjct: 101 VSQAIPGPRVGSSKLPWMLAVPLAYAGVTFVTAFVKTVQKFSSPKAQRKKLVNQNAMLCR 160
Query: 566 SIDEVFASSRSDLDSKELNSLKSKTGFTTHEILRKYI 676 SIDE+ + S EL +L+ KT F EILRKYI Sbjct: 161 SIDELLRKD-GTVHSSELKALEQKTEFNMEEILRKYI 196
>tr|Q7XKI6|Q7XKI6_ORYSJ Os04g0527800 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0038O10.22 PE=2 SV=2 Length = 338
Score = 134 bits (338), Expect = 4e-30 Identities = 67/154 (43%), Positives = 96/154 (62%) Frame = +2
Query: 215 LTARAKRDNSKQEAAPTAAADKGKSPATAKXXXXXXXXXXIPWLQEKAETLYENVGVAVN 394 L ARAKR S+ AA A+ P + +PW+Q+KA L E G Sbjct: 49 LVARAKRPGSRTAAASRQPANPSDVPKR-EADEEVEVEEEMPWIQDKALDLVEFTGTVTQ 107
Query: 395 AIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSSPKAKRRRRVDQNLFLCTSID 574 AIPGPRVGS+ +PWLLA P+ Y+G++FV+AVV+TV +++SP+ +++RRV +N+FL S+D Sbjct: 108 AIPGPRVGSSPVPWLLAVPLAYVGVSFVLAVVRTVRRFTSPRTQKKRRVSKNIFLLKSLD 167
Query: 575 EVFASSRSDLDSKELNSLKSKTGFTTHEILRKYI 676 E+F R +D L L KTGF +++RKYI Sbjct: 168 ELFQKGREAVDFPALQELMEKTGFDMDDVVRKYI 201
>tr|Q01HN9|Q01HN9_ORYSA OSIGBa0115K01-H0319F09.13 protein OS=Oryza sativa GN=OSIGBa0115K01-H0319F09.13 PE=4 SV=1 Length = 338
Score = 134 bits (338), Expect = 4e-30 Identities = 67/154 (43%), Positives = 96/154 (62%) Frame = +2
Query: 215 LTARAKRDNSKQEAAPTAAADKGKSPATAKXXXXXXXXXXIPWLQEKAETLYENVGVAVN 394 L ARAKR S+ AA A+ P + +PW+Q+KA L E G Sbjct: 49 LVARAKRPGSRTAAASRQPANPSDVPKR-EADEEVEVEEEMPWIQDKALDLVEFTGTVTQ 107
Query: 395 AIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSSPKAKRRRRVDQNLFLCTSID 574 AIPGPRVGS+ +PWLLA P+ Y+G++FV+AVV+TV +++SP+ +++RRV +N+FL S+D Sbjct: 108 AIPGPRVGSSPVPWLLAVPLAYVGVSFVLAVVRTVRRFTSPRTQKKRRVSKNIFLLKSLD 167
Query: 575 EVFASSRSDLDSKELNSLKSKTGFTTHEILRKYI 676 E+F R +D L L KTGF +++RKYI Sbjct: 168 ELFQKGREAVDFPALQELMEKTGFDMDDVVRKYI 201
>tr|B8ASC1|B8ASC1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16722 PE=4 SV=1 Length = 338
Score = 134 bits (338), Expect = 4e-30 Identities = 67/154 (43%), Positives = 96/154 (62%) Frame = +2
Query: 215 LTARAKRDNSKQEAAPTAAADKGKSPATAKXXXXXXXXXXIPWLQEKAETLYENVGVAVN 394 L ARAKR S+ AA A+ P + +PW+Q+KA L E G Sbjct: 49 LVARAKRPGSRTAAASRQPANPSDVPKR-EADEEVEVEEEMPWIQDKALDLVEFTGTVTQ 107
Query: 395 AIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSSPKAKRRRRVDQNLFLCTSID 574 AIPGPRVGS+ +PWLLA P+ Y+G++FV+AVV+TV +++SP+ +++RRV +N+FL S+D Sbjct: 108 AIPGPRVGSSPVPWLLAVPLAYVGVSFVLAVVRTVRRFTSPRTQKKRRVSKNIFLLKSLD 167
Query: 575 EVFASSRSDLDSKELNSLKSKTGFTTHEILRKYI 676 E+F R +D L L KTGF +++RKYI Sbjct: 168 ELFQKGREAVDFPALQELMEKTGFDMDDVVRKYI 201
>tr|A3AVR8|A3AVR8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_014890 PE=4 SV=1 Length = 368
Score = 134 bits (338), Expect = 4e-30 Identities = 67/154 (43%), Positives = 96/154 (62%) Frame = +2
Query: 215 LTARAKRDNSKQEAAPTAAADKGKSPATAKXXXXXXXXXXIPWLQEKAETLYENVGVAVN 394 L ARAKR S+ AA A+ P + +PW+Q+KA L E G Sbjct: 49 LVARAKRPGSRTAAASRQPANPSDVPKR-EADEEVEVEEEMPWIQDKALDLVEFTGTVTQ 107
Query: 395 AIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSSPKAKRRRRVDQNLFLCTSID 574 AIPGPRVGS+ +PWLLA P+ Y+G++FV+AVV+TV +++SP+ +++RRV +N+FL S+D Sbjct: 108 AIPGPRVGSSPVPWLLAVPLAYVGVSFVLAVVRTVRRFTSPRTQKKRRVSKNIFLLKSLD 167
Query: 575 EVFASSRSDLDSKELNSLKSKTGFTTHEILRKYI 676 E+F R +D L L KTGF +++RKYI Sbjct: 168 ELFQKGREAVDFPALQELMEKTGFDMDDVVRKYI 201
>tr|A7QNP1|A7QNP1_VITVI Chromosome undetermined scaffold_133, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002604001 PE=4 SV=1 Length = 345
Score = 131 bits (330), Expect = 3e-29 Identities = 64/114 (56%), Positives = 79/114 (69%) Frame = +2
Query: 335 IPWLQEKAETLYENVGVAVNAIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSS 514 +PW++EKA L E G AIPGPRVG +S PW+LA P+ Y GITFVIA V+TV K++S Sbjct: 88 LPWIEEKALDLVEFSGSVAQAIPGPRVGRSSFPWILAIPLAYAGITFVIAFVRTVQKFNS 147
Query: 515 PKAKRRRRVDQNLFLCTSIDEVFASSRSDLDSKELNSLKSKTGFTTHEILRKYI 676 PK KRR+ V++N LC SIDEVF + R + LN L KTGF+ EI RKYI Sbjct: 148 PKQKRRKLVNKNAMLCKSIDEVFLNGRDEELQSALNGLMQKTGFSREEIFRKYI 201
>tr|A9TBF4|A9TBF4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_45363 PE=4 SV=1 Length = 249
Score = 125 bits (314), Expect = 2e-27 Identities = 58/114 (50%), Positives = 80/114 (70%) Frame = +2
Query: 335 IPWLQEKAETLYENVGVAVNAIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSS 514 I W+QEKAE L G A++ +PGPRV T +PWL+A P+ YLGITFVIA V+T KY+S Sbjct: 10 ISWIQEKAEDLVIATGQAIDRVPGPRVAETRMPWLVALPLAYLGITFVIACVRTYKKYTS 69
Query: 515 PKAKRRRRVDQNLFLCTSIDEVFASSRSDLDSKELNSLKSKTGFTTHEILRKYI 676 PK +R+R+V +N FL S+ E F + R +LD+ +L L +K F+ E+LRKY+ Sbjct: 70 PKGQRKRQVGKNAFLVESLGEYFPTKRDELDANKLQKLANKCNFSLGEVLRKYV 123
>tr|A5BDZ0|A5BDZ0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030897 PE=4 SV=1 Length = 371
Score = 119 bits (298), Expect = 2e-25 Identities = 64/135 (47%), Positives = 79/135 (58%), Gaps = 21/135 (15%) Frame = +2
Query: 335 IPWLQEKAETLYENVGVAVNAIPGPRVGSTSLPWLLAAPIGYLGITFVIAVVKTVLKYSS 514 +PW++EKA L E G AIPGPRVG +S PW+LA P+ Y GITFVIA V+TV K++S Sbjct: 88 LPWIEEKALDLVEFSGSVAQAIPGPRVGRSSFPWILAIPLAYAGITFVIAFVRTVQKFNS 147
Query: 515 PKAKRRR---------------------RVDQNLFLCTSIDEVFASSRSDLDSKELNSLK 631 PK KRR+ V++N LC SIDEVF + R + LN L Sbjct: 148 PKQKRRKLVPVLLICFVYFLIFEDINSNDVNKNAMLCKSIDEVFLNGRDEELQSALNGLM 207
Query: 632 SKTGFTTHEILRKYI 676 KTGF+ EI RKYI Sbjct: 208 QKTGFSREEIFRKYI 222
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