Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949146|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_D09, 5' (729 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 398 e-110 sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 394 e-109 sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 394 e-109 sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 394 e-109 sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 393 e-109 sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 392 e-109 sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 392 e-108 sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 391 e-108 sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 391 e-108 sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 391 e-108 sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 391 e-108 sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 390 e-108 sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 389 e-108 sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 389 e-108 sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 389 e-108 sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 387 e-107 sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 387 e-107 sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 387 e-107 sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 387 e-107 sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 386 e-107 sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 386 e-107 sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 386 e-107 sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 385 e-106 sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas... 385 e-106 sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 384 e-106 sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop... 384 e-106 sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 384 e-106 sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas... 384 e-106 sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 384 e-106 sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 383 e-106
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1 Length = 262
Score = 398 bits (1022), Expect = e-110 Identities = 190/214 (88%), Positives = 202/214 (94%), Gaps = 4/214 (1%) Frame = +1
Query: 100 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 267 KVG+ GE R++MRKTV K +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT Sbjct: 19 KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78
Query: 268 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 447 AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG Sbjct: 79 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138
Query: 448 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 627 GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198
Query: 628 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG Sbjct: 199 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 232
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1 Length = 269
Score = 394 bits (1013), Expect = e-109 Identities = 195/226 (86%), Positives = 211/226 (93%), Gaps = 3/226 (1%) Frame = +1
Query: 61 GQAVYKPQSELSSKV-GNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 231 GQ++ KP +ELS KV GNV EARV+MR+TVSKS SD+ WYG DR K+LGPFSGE PSYL Sbjct: 14 GQSLVKPVNELSRKVLGNV-EARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYL 72
Query: 232 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 411 GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAV Sbjct: 73 NGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAV 132
Query: 412 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 591 WFKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIY Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIY 192
Query: 592 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 PGGSFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 193 PGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238
Score = 30.8 bits (68), Expect = 7.9 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +1
Query: 241 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 390 +PG +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1 Length = 265
Score = 394 bits (1013), Expect = e-109 Identities = 198/219 (90%), Positives = 201/219 (91%), Gaps = 1/219 (0%) Frame = +1
Query: 76 KPQSELSSKVGNVGEARVSMRKTVSKS-SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 252 KP +ELS KVG GEARV M SK+ S S WYG DR YLGPFSG PSYL GEFPGD Sbjct: 18 KPVNELSRKVG-AGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGD 76
Query: 253 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 432 YGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ Sbjct: 77 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 136
Query: 433 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 612 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP Sbjct: 137 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 196
Query: 613 LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG Sbjct: 197 LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 235
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1 Length = 265
Score = 394 bits (1011), Expect = e-109 Identities = 190/207 (91%), Positives = 198/207 (95%), Gaps = 2/207 (0%) Frame = +1
Query: 115 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 288 G RVSMRKTV+K +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP Sbjct: 29 GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88
Query: 289 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 468 ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN Sbjct: 89 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148
Query: 469 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAE 648 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEAFAE Sbjct: 149 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAE 208
Query: 649 LKVKELKNGRLAMFSMFGFFVQAIVTG 729 LKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTG 235
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 267
Score = 393 bits (1010), Expect = e-109 Identities = 188/210 (89%), Positives = 197/210 (93%), Gaps = 4/210 (1%) Frame = +1
Query: 112 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 279 +GE R++MRKT K S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLS Sbjct: 28 IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87
Query: 280 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 459 ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDY Sbjct: 88 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 147
Query: 460 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 639 LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEA Sbjct: 148 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEA 207
Query: 640 FAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 FAELKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 208 FAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1 Length = 255
Score = 392 bits (1008), Expect = e-109 Identities = 189/207 (91%), Positives = 197/207 (95%), Gaps = 2/207 (0%) Frame = +1
Query: 115 GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 288 G A+ +MRKT SKS S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADP Sbjct: 19 GNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 78
Query: 289 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 468 ETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EGGLDYLGN Sbjct: 79 ETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 138
Query: 469 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAE 648 PSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYPGGSFDPLGLADDPEAFAE Sbjct: 139 PSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAE 198
Query: 649 LKVKELKNGRLAMFSMFGFFVQAIVTG 729 LKVKELKNGRLAMFSMFGFFVQAIVTG Sbjct: 199 LKVKELKNGRLAMFSMFGFFVQAIVTG 225
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1 Length = 267
Score = 392 bits (1006), Expect = e-108 Identities = 188/209 (89%), Positives = 197/209 (94%), Gaps = 4/209 (1%) Frame = +1
Query: 115 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 282 G RV+MRKT +K SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA Sbjct: 29 GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88
Query: 283 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 462 DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148
Query: 463 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAF 642 GNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAF Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAF 208
Query: 643 AELKVKELKNGRLAMFSMFGFFVQAIVTG 729 AELKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 209 AELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1 Length = 265
Score = 391 bits (1005), Expect = e-108 Identities = 192/226 (84%), Positives = 205/226 (90%), Gaps = 3/226 (1%) Frame = +1
Query: 61 GQAVYKPQSELSSKVGNV-GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 231 GQAV +LS + G R++MRK V+KS S SPWYGPDRVKYLGPFSGE+PSYL Sbjct: 15 GQAV-----KLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYL 69
Query: 232 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 411 GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAV Sbjct: 70 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 129
Query: 412 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 591 WFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+Y Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLY 189
Query: 592 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 PGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 190 PGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1 Length = 266
Score = 391 bits (1005), Expect = e-108 Identities = 193/227 (85%), Positives = 203/227 (89%), Gaps = 4/227 (1%) Frame = +1
Query: 61 GQAVYKPQSELSSKVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSY 228 G+AV P S + G + +MRKTV+K SS SPWYGPDRVKYLGPFSGEAPSY Sbjct: 15 GKAVNVPSSSQIT-----GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSY 69
Query: 229 LKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEA 408 L GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL A+NGVKFGEA Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEA 129
Query: 409 VWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 588 VWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+ Sbjct: 130 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPL 189
Query: 589 YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 190 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1 Length = 267
Score = 391 bits (1004), Expect = e-108 Identities = 188/209 (89%), Positives = 196/209 (93%), Gaps = 4/209 (1%) Frame = +1
Query: 115 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 282 G + MRKTV+K SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSA Sbjct: 29 GNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSA 88
Query: 283 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 462 DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148
Query: 463 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAF 642 GNPSLVHAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YPGGSFDPLGLADDPEAF Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAF 208
Query: 643 AELKVKELKNGRLAMFSMFGFFVQAIVTG 729 AELKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 209 AELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
|
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949146|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_D09, 5' (729 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 405 e-111 tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ... 403 e-111 tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco... 401 e-110 tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten... 401 e-110 tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 400 e-110 tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten... 400 e-110 tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 398 e-109 tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ... 397 e-109 tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten... 397 e-109 tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten... 397 e-109 tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 396 e-109 tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ... 395 e-108 tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ... 395 e-108 tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 395 e-108 tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor... 395 e-108 tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb... 394 e-108 tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ... 394 e-108 tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 394 e-108 tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 394 e-108 tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome... 394 e-108 tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC... 394 e-108 tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ... 394 e-108 tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ... 393 e-108 tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC... 393 e-108 tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin... 393 e-108 tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu... 393 e-108 tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC... 393 e-108 tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu... 392 e-107 tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O... 392 e-107 tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb... 392 e-107
>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1 Length = 265
Score = 405 bits (1042), Expect = e-111 Identities = 198/223 (88%), Positives = 209/223 (93%) Frame = +1
Query: 61 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 240 GQ++ KP +ELS KVGNV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GE Sbjct: 14 GQSLLKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGE 72
Query: 241 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 420 F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK Sbjct: 73 FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 132
Query: 421 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 600 AG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYPGG Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGG 192
Query: 601 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 SFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 193 SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 235
>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding protein of photosystem II OS=Ginkgo biloba PE=2 SV=1 Length = 270
Score = 403 bits (1036), Expect = e-111 Identities = 198/228 (86%), Positives = 210/228 (92%), Gaps = 5/228 (2%) Frame = +1
Query: 61 GQAVYKPQSELSSKVGNV-GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPS 225 GQ V KPQ+E VG V GE R++MRKT SK SS SPWYGPDRVKYLGPFSGEAPS Sbjct: 16 GQIVLKPQNEF---VGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPS 72
Query: 226 YLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 405 YL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGE Sbjct: 73 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 132
Query: 406 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDP 585 AVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DP Sbjct: 133 AVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDP 192
Query: 586 IYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 IYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTG Sbjct: 193 IYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 240
>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physcomitrella patens PE=2 SV=1 Length = 268
Score = 401 bits (1031), Expect = e-110 Identities = 198/225 (88%), Positives = 210/225 (93%), Gaps = 2/225 (0%) Frame = +1
Query: 61 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 234 GQA+ KP SELS KV N GEARV+MRKTVSKSS DS WYG DR K+LGPFSGE PSYL Sbjct: 15 GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73
Query: 235 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 414 GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW Sbjct: 74 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133
Query: 415 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 594 FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193
Query: 595 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 GGSFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 194 GGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238
>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1 Length = 268
Score = 401 bits (1031), Expect = e-110 Identities = 198/225 (88%), Positives = 210/225 (93%), Gaps = 2/225 (0%) Frame = +1
Query: 61 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 234 GQA+ KP SELS KV N GEARV+MRKTVSKSS DS WYG DR K+LGPFSGE PSYL Sbjct: 15 GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73
Query: 235 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 414 GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW Sbjct: 74 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133
Query: 415 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 594 FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193
Query: 595 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 GGSFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 194 GGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238
>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1 Length = 267
Score = 400 bits (1029), Expect = e-110 Identities = 197/225 (87%), Positives = 210/225 (93%), Gaps = 2/225 (0%) Frame = +1
Query: 61 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 234 GQ V KP +ELS KVGNV EARV+MR+TVSKS SDS WYG DR K+LGPFSGE PSYL Sbjct: 14 GQGVLKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLT 72
Query: 235 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 414 GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132
Query: 415 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 594 FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192
Query: 595 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 GGSFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 193 GGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1 Length = 267
Score = 400 bits (1028), Expect = e-110 Identities = 196/225 (87%), Positives = 211/225 (93%), Gaps = 2/225 (0%) Frame = +1
Query: 61 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 234 GQ++ KP +ELS KVGNV EARV+MR+TVSKS SDS WYG DR K+LGPFSGE PSYL Sbjct: 14 GQSLVKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72
Query: 235 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 414 GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132
Query: 415 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 594 FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192
Query: 595 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 GGSFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 193 GGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea mays PE=2 SV=1 Length = 262
Score = 398 bits (1022), Expect = e-109 Identities = 190/214 (88%), Positives = 202/214 (94%), Gaps = 4/214 (1%) Frame = +1
Query: 100 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 267 KVG+ GE R++MRKTV K +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT Sbjct: 19 KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78
Query: 268 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 447 AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG Sbjct: 79 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138
Query: 448 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 627 GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198
Query: 628 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG Sbjct: 199 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 232
>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding protein 2 (Predicted protein) OS=Physcomitrella patens subsp. patens GN=PpLhcb2 PE=4 SV=1 Length = 267
Score = 397 bits (1021), Expect = e-109 Identities = 195/225 (86%), Positives = 210/225 (93%), Gaps = 2/225 (0%) Frame = +1
Query: 61 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 234 GQ++ KP +ELS KVG+ +ARV+MR+TV+KS SDS WYG DR KYLGPFSGE PSYL Sbjct: 14 GQSLLKPVNELSRKVGS-SQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLN 72
Query: 235 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 414 GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132
Query: 415 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 594 FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYP Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYP 192
Query: 595 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 GGSFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 193 GGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1 Length = 267
Score = 397 bits (1021), Expect = e-109 Identities = 197/225 (87%), Positives = 209/225 (92%), Gaps = 2/225 (0%) Frame = +1
Query: 61 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 234 GQ++ KP +ELS KVGNV EARVSMRK+ SKS SDS WYG DR KYLGPFSGE PSYL Sbjct: 14 GQSLLKPVNELSRKVGNV-EARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLN 72
Query: 235 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 414 GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132
Query: 415 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 594 FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYP Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYP 192
Query: 595 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 GGSFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 193 GGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
>tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_110819 PE=4 SV=1 Length = 267
Score = 397 bits (1019), Expect = e-109 Identities = 192/225 (85%), Positives = 212/225 (94%), Gaps = 2/225 (0%) Frame = +1
Query: 61 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 234 GQ++++P +ELS KVGNV ++RV+MR+TV+KS SDS WYG DR K+LGPFSGE PSYL Sbjct: 14 GQSLFQPVNELSRKVGNV-DSRVTMRRTVNKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72
Query: 235 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 414 GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132
Query: 415 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 594 FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192
Query: 595 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 729 GGSFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTG Sbjct: 193 GGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
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