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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949163
Clone id TST38A01NGRL0005_E02
Library
Length 641
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_E02. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
TGAAGCGTCAGCTTCAGTTGTTGTATGCTGAGAATCAGGTCCTCAAGAAAGCCATGGAAG
ATATGAAGGCACAGCTTTGAGCAGAGAGGCAATTGTAAAACCATGAAATCTTGGTGGTAA
TCTTGGGGATGTGCTGATGGAAGAGCCTGCTACTGATGGAGGTTCTAAAGAAAAGAAGGA
GCCTTTTCTTAAAAGCCGAAATGAAAAGGGTGGGTCAGTGTCAGATAAAGGTAAGCGCAA
TCATGGCCATGATGGTCTGGATGCACTCAAGAAGCTTAGTGGATTAGGCAGAGGAGGCAA
TGGGAAGTCCCATTCTATGTTCGATTAGTCAAGTAGAAGGTCACTATACAAAGCAGAGGG
TTTCTTCTGTGGCTTGTGCTGACACAGGTTTTGAATATTTCAGCATTTTTGGAGGGGTGA
TGATCATGCTTACATTGTGTGGCTAGGGTGTGGGTGTTGACATTTATGTGTGAGACACTA
AGGCTCTTTGAAGCTCGTGTGGCATCCAACTTGAAGATAGCTTGTACAGATGTCAGAGTG
CTAATCATTTGATGCCATCACGAAATTGTTCTCCTGATGGACCCATAGTATGTACTCACT
GCAAACTTGGGATAAGGAAAGGGCTCCATACCAATAGCAAA
■■Homology search results ■■ -
sp_hit_id Q9GRW7
Definition sp|Q9GRW7|NONA_DROVI Protein no-on-transient A OS=Drosophila virilis
Align length 66
Score (bit) 35.8
E-value 0.19
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949163|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_E02, 5'
         (641 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9GRW7|NONA_DROVI Protein no-on-transient A OS=Drosophila vir...    36   0.19 
sp|Q80T03|MUC6_MOUSE Mucin-6 OS=Mus musculus GN=Muc6 PE=2 SV=1         33   0.96 
sp|Q69ZA1|CD2L5_MOUSE Cell division cycle 2-like protein kinase ...    33   1.3  
sp|Q14004|CD2L5_HUMAN Cell division cycle 2-like protein kinase ...    33   1.6  
sp|Q9PUU6|FZD2_XENLA Frizzled-2 OS=Xenopus laevis GN=fzd2 PE=2 SV=1    32   2.1  
sp|Q6UB99|ANR11_HUMAN Ankyrin repeat domain-containing protein 1...    32   3.7  
sp|O82643|ZIP9_ARATH Zinc transporter 9 OS=Arabidopsis thaliana ...    31   4.8  
sp|Q9GRX4|NONA_DROLR Protein no-on-transient A OS=Drosophila lit...    31   6.2  

>sp|Q9GRW7|NONA_DROVI Protein no-on-transient A OS=Drosophila
           virilis GN=nonA PE=2 SV=1
          Length = 697

 Score = 35.8 bits (81), Expect = 0.19
 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +2

Query: 116 GNLGDVLMEEPATDGGSKEKKEPF-LKSRNEKGGSVSDKGKRNHGHDGLDALKKLS---G 283
           G LG     E A+DGG  EK++ F   ++N  GGSV   G    G  G +  K  +   G
Sbjct: 32  GKLGPQKQNEGASDGGPAEKRQRFGPNNQNGGGGSVVGGGGGGGGGGGQNQNKNFANKGG 91

Query: 284 LGRGGN 301
            G GGN
Sbjct: 92  FGGGGN 97


>sp|Q80T03|MUC6_MOUSE Mucin-6 OS=Mus musculus GN=Muc6 PE=2 SV=1
          Length = 2850

 Score = 33.5 bits (75), Expect = 0.96
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -3

Query: 162  PPSVAGSSISTSPRLPPRFHGFTIASLLKAVPSYLPWLS*GPDSQHTTTE 13
            PP+  GS  +T   +   FH  T A+     PSYLP L   P S  ++TE
Sbjct: 1246 PPTTTGSQPTTETTISTEFHSSTSAN-TPVAPSYLPGLPTPPPSAPSSTE 1294


>sp|Q69ZA1|CD2L5_MOUSE Cell division cycle 2-like protein kinase 5
           OS=Mus musculus GN=Cdc2l5 PE=1 SV=2
          Length = 1511

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = +2

Query: 149 ATDGGSKEKKEPFLKSRNEKGGSVSDKGKRNHGHDG---LDALKKLSGLGRGGNGKSHSM 319
           ++ G SKE+     +    + GS + K +  HGH G    +A K  S    GG  KS S 
Sbjct: 204 SSSGRSKERHREHRRRDGTRSGSEASKARSRHGHSGEERAEAAKSGSSSSSGGRRKSASA 263

Query: 320 FD*SS 334
              SS
Sbjct: 264 TSSSS 268


>sp|Q14004|CD2L5_HUMAN Cell division cycle 2-like protein kinase 5
           OS=Homo sapiens GN=CDC2L5 PE=1 SV=2
          Length = 1512

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = +2

Query: 149 ATDGGSKEKKEPFLKSRNEKGGSVSDKGKRNHGHDG---LDALKKLSGLGRGGNGKSHSM 319
           ++ G SKE+     +   ++GGS + K +  H H G    +  K  S    GG  KS S 
Sbjct: 204 SSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASA 263

Query: 320 FD*SS 334
              SS
Sbjct: 264 TSSSS 268


>sp|Q9PUU6|FZD2_XENLA Frizzled-2 OS=Xenopus laevis GN=fzd2 PE=2 SV=1
          Length = 551

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -1

Query: 260 PDHHGHDCAYLYLTLTHPFHFGF*EKAPSFL 168
           P HHG     +Y TL HPFH     K PS+L
Sbjct: 167 PPHHGTPGPPIYATLDHPFHCPRVLKVPSYL 197


>sp|Q6UB99|ANR11_HUMAN Ankyrin repeat domain-containing protein 11
            OS=Homo sapiens GN=ANKRD11 PE=1 SV=2
          Length = 2663

 Score = 31.6 bits (70), Expect = 3.7
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 113  GGNLGDVLMEEPATDGGSKEKKEPF-LKSRNEKGGSVSDKGKRN 241
            G  LGD  ++E   DG  KEK +P  + + N+K     D GK++
Sbjct: 1522 GPRLGDAKLKEKFKDGAEKEKGDPVKMSNGNDKVAPSKDPGKKD 1565


>sp|O82643|ZIP9_ARATH Zinc transporter 9 OS=Arabidopsis thaliana
           GN=ZIP9 PE=2 SV=1
          Length = 344

 Score = 31.2 bits (69), Expect = 4.8
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
 Frame = +2

Query: 134 LMEEPATDGGSKEKKEPFLKSRNEKGGSVSDKGKRNH----------GHDGLDALKKLSG 283
           +M +P  + G       FL+ + E GG++   G R H          G +G +AL K SG
Sbjct: 114 VMSDPGLESG-------FLRDQ-EDGGALHIVGMRAHAEHHRHSLSMGAEGFEALSKRSG 165

Query: 284 LGRGGNGKSHSMFD 325
           +   G+G SH   D
Sbjct: 166 VSGHGHGHSHGHGD 179


>sp|Q9GRX4|NONA_DROLR Protein no-on-transient A OS=Drosophila
           littoralis GN=nonA PE=2 SV=1
          Length = 698

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +2

Query: 116 GNLGDVLMEEPATDGGSKEKKEPF-LKSRNEKGGSVSDKGKRNHGHDGLDALKKLSGLGR 292
           G  G     E A+DGG  EK++ F   ++N  GGSV   G    G          SG G 
Sbjct: 32  GKHGPQKQNEGASDGGPAEKRQRFGPNNQNGGGGSVGGGGGGGGG----------SGGGG 81

Query: 293 GGNGKSHS 316
           GG G++ +
Sbjct: 82  GGGGQNQN 89
tr_hit_id B6VLM1
Definition tr|B6VLM1|B6VLM1_9ENTR Protease specific for phage lambda cii repressor OS=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949
Align length 56
Score (bit) 36.6
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949163|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_E02, 5'
         (641 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6VLM1|B6VLM1_9ENTR Protease specific for phage lambda cii re...    37   1.3  
tr|B6PX65|B6PX65_BRAFL Putative uncharacterized protein OS=Branc...    36   1.7  
tr|Q0G1Y2|Q0G1Y2_9RHIZ Cobalamin (5`-phosphate) synthase protein...    36   2.3  
tr|Q9GP45|Q9GP45_DROVI NONA protein (Fragment) OS=Drosophila vir...    36   2.3  
tr|A8P3K7|A8P3K7_BRUMA Retinitis pigmentosa GTPase regulator-lik...    35   3.0  
tr|Q66FB3|Q66FB3_YERPS Putative membrane protein OS=Yersinia pse...    35   3.9  
tr|B2K207|B2K207_YERPB HflK protein OS=Yersinia pseudotuberculos...    35   3.9  
tr|B1JMN6|B1JMN6_YERPY HflK protein OS=Yersinia pseudotuberculos...    35   3.9  
tr|A7FMX7|A7FMX7_YERP3 HflK protein OS=Yersinia pseudotuberculos...    35   3.9  
tr|A4VZI6|A4VZI6_STRS2 Putative uncharacterized protein OS=Strep...    35   3.9  
tr|A4VTA4|A4VTA4_STRSY Putative uncharacterized protein OS=Strep...    35   3.9  
tr|A4S8Z1|A4S8Z1_OSTLU Predicted protein OS=Ostreococcus lucimar...    35   3.9  
tr|Q54T06|Q54T06_DICDI Cation efflux family protein OS=Dictyoste...    35   3.9  
tr|B6KD88|B6KD88_TOXGO Putative uncharacterized protein OS=Toxop...    35   5.1  
tr|Q7CKM0|Q7CKM0_YERPE Putative membrane protein OS=Yersinia pes...    34   6.6  
tr|Q1CEF7|Q1CEF7_YERPN Membrane protein OS=Yersinia pestis bv. A...    34   6.6  
tr|Q1C102|Q1C102_YERPA Putative membrane protein OS=Yersinia pes...    34   6.6  
tr|A9QYM9|A9QYM9_YERPG HflK protein OS=Yersinia pestis bv. Antiq...    34   6.6  
tr|A4TRN7|A4TRN7_YERPP Membrane protein OS=Yersinia pestis (stra...    34   6.6  
tr|B0I020|B0I020_YERPE HflK protein OS=Yersinia pestis biovar An...    34   6.6  
tr|B0HMB1|B0HMB1_YERPE HflK protein OS=Yersinia pestis biovar An...    34   6.6  
tr|B0H0J2|B0H0J2_YERPE HflK protein OS=Yersinia pestis biovar Me...    34   6.6  
tr|B0GNP2|B0GNP2_YERPE HflK protein OS=Yersinia pestis biovar Or...    34   6.6  
tr|B0GHB0|B0GHB0_YERPE HflK protein OS=Yersinia pestis biovar An...    34   6.6  
tr|B0A0M0|B0A0M0_YERPE HflK protein OS=Yersinia pestis biovar Or...    34   6.6  
tr|A9Z4N0|A9Z4N0_YERPE HflK protein OS=Yersinia pestis biovar Or...    34   6.6  
tr|A6BVC3|A6BVC3_YERPE Putative membrane protein OS=Yersinia pes...    34   6.6  
tr|B6MDA6|B6MDA6_BRAFL Putative uncharacterized protein OS=Branc...    34   6.6  
tr|B4JBZ3|B4JBZ3_DROGR GH11608 OS=Drosophila grimshawi GN=GH1160...    34   8.7  
tr|A8PIV0|A8PIV0_COPC7 Predicted protein OS=Coprinopsis cinerea ...    34   8.7  

>tr|B6VLM1|B6VLM1_9ENTR Protease specific for phage lambda cii
           repressor OS=Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949 GN=hflK PE=4 SV=1
          Length = 408

 Score = 36.6 bits (83), Expect = 1.3
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
 Frame = +2

Query: 158 GGSKEKKEPFLKSRNEKGGSVSDKGKRNHGHDGLDAL-----KKLSGLG--RGGNG 304
           G + + ++P+  S N  G S  +KG RN G   LD L      KL G G  +GGNG
Sbjct: 7   GNNGQDRDPWGSSNNNGGNSGGNKGGRNRGASDLDDLFRKLSSKLGGFGGNKGGNG 62


>tr|B6PX65|B6PX65_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_112024 PE=4 SV=1
          Length = 657

 Score = 36.2 bits (82), Expect = 1.7
 Identities = 22/65 (33%), Positives = 30/65 (46%)
 Frame = +2

Query: 125 GDVLMEEPATDGGSKEKKEPFLKSRNEKGGSVSDKGKRNHGHDGLDALKKLSGLGRGGNG 304
           GDV+ E P   GG + K  P  +    KGG +   G+   G  G     K   +G+GG  
Sbjct: 525 GDVVKEAPMAQGG-RGKGGPMGQGGRGKGGPMGQGGRGKGGPMGQGGRGKTGSIGQGGGE 583

Query: 305 KSHSM 319
           K+ SM
Sbjct: 584 KAGSM 588


>tr|Q0G1Y2|Q0G1Y2_9RHIZ Cobalamin (5`-phosphate) synthase protein
           OS=Fulvimarina pelagi HTCC2506 GN=FP2506_01575 PE=4 SV=1
          Length = 267

 Score = 35.8 bits (81), Expect = 2.3
 Identities = 26/59 (44%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = -3

Query: 231 PLSDTDPPFSFRLLRKGSFFSLEPPSVAGSSISTSPR-LPPRFHGFTIASLLKAVPSYL 58
           PL DT P F  RLLR  +F +  PP  A S+  + P  L      F IA L+ AVPS L
Sbjct: 7   PLRDTMPDFVKRLLRSLAFLTRLPP--AASAFDSGPHPLGRDVAAFPIAGLVAAVPSAL 63


>tr|Q9GP45|Q9GP45_DROVI NONA protein (Fragment) OS=Drosophila
           virilis GN=nonA PE=4 SV=1
          Length = 98

 Score = 35.8 bits (81), Expect = 2.3
 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +2

Query: 116 GNLGDVLMEEPATDGGSKEKKEPF-LKSRNEKGGSVSDKGKRNHGHDGLDALKKLS---G 283
           G LG     E A+DGG  EK++ F   ++N  GGSV   G    G  G +  K  +   G
Sbjct: 32  GKLGPQKQNEGASDGGPAEKRQRFGPNNQNGGGGSVVGGGGGGGGGGGQNQNKNFANKGG 91

Query: 284 LGRGGN 301
            G GGN
Sbjct: 92  FGGGGN 97


>tr|A8P3K7|A8P3K7_BRUMA Retinitis pigmentosa GTPase regulator-like
           protein OS=Brugia malayi GN=Bm1_15505 PE=4 SV=1
          Length = 157

 Score = 35.4 bits (80), Expect = 3.0
 Identities = 29/89 (32%), Positives = 39/89 (43%)
 Frame = +2

Query: 32  ESGPQESHGRYEGTALSREAIVKP*NLGGNLGDVLMEEPATDGGSKEKKEPFLKSRNEKG 211
           E G +E  GR EG     E        G N G +  EE   +GG KE+     + RNE  
Sbjct: 9   EGGMKEEEGRNEGGMKEEE--------GRNEGGMKEEEGRNEGGMKEE-----EGRNE-- 53

Query: 212 GSVSDKGKRNHGHDGLDALKKLSGLGRGG 298
           G + ++G RN G      +K+  G   GG
Sbjct: 54  GGMKEEGGRNEG-----GMKEEGGRNEGG 77



 Score = 34.3 bits (77), Expect = 6.6
 Identities = 29/89 (32%), Positives = 38/89 (42%)
 Frame = +2

Query: 32  ESGPQESHGRYEGTALSREAIVKP*NLGGNLGDVLMEEPATDGGSKEKKEPFLKSRNEKG 211
           E G +E  GR EG     E        G N G +  EE   +GG KE+       RNE  
Sbjct: 20  EGGMKEEEGRNEGGMKEEE--------GRNEGGMKEEEGRNEGGMKEE-----GGRNE-- 64

Query: 212 GSVSDKGKRNHGHDGLDALKKLSGLGRGG 298
           G + ++G RN G      +K+  G   GG
Sbjct: 65  GGMKEEGGRNEG-----GMKEEEGRNEGG 88


>tr|Q66FB3|Q66FB3_YERPS Putative membrane protein OS=Yersinia
           pseudotuberculosis GN=hflA PE=4 SV=1
          Length = 420

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
 Frame = +2

Query: 158 GGSKEKKEPFLKSRNE---KGGSVSDKGKRNHGHDGLDAL-----KKLS-----GLGRGG 298
           G + + ++P+  S N     GG+ ++KG R+ G   LD +     KKLS     G G GG
Sbjct: 7   GNNGQDRDPWGSSNNNGGNSGGNNNNKGGRDQGPPDLDDIFRKLSKKLSSLGGKGSGSGG 66

Query: 299 NGKSH 313
           NG SH
Sbjct: 67  NGASH 71


>tr|B2K207|B2K207_YERPB HflK protein OS=Yersinia pseudotuberculosis
           serotype IB (strain PB1/+) GN=YPTS_0456 PE=4 SV=1
          Length = 420

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
 Frame = +2

Query: 158 GGSKEKKEPFLKSRNE---KGGSVSDKGKRNHGHDGLDAL-----KKLS-----GLGRGG 298
           G + + ++P+  S N     GG+ ++KG R+ G   LD +     KKLS     G G GG
Sbjct: 7   GNNGQDRDPWGSSNNNGGNSGGNNNNKGGRDQGPPDLDDIFRKLSKKLSSLGGKGSGSGG 66

Query: 299 NGKSH 313
           NG SH
Sbjct: 67  NGASH 71


>tr|B1JMN6|B1JMN6_YERPY HflK protein OS=Yersinia pseudotuberculosis
           serotype O:3 (strain YPIII) GN=YPK_3796 PE=4 SV=1
          Length = 420

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
 Frame = +2

Query: 158 GGSKEKKEPFLKSRNE---KGGSVSDKGKRNHGHDGLDAL-----KKLS-----GLGRGG 298
           G + + ++P+  S N     GG+ ++KG R+ G   LD +     KKLS     G G GG
Sbjct: 7   GNNGQDRDPWGSSNNNGGNSGGNNNNKGGRDQGPPDLDDIFRKLSKKLSSLGGKGSGSGG 66

Query: 299 NGKSH 313
           NG SH
Sbjct: 67  NGASH 71


>tr|A7FMX7|A7FMX7_YERP3 HflK protein OS=Yersinia pseudotuberculosis
           serotype O:1b (strain IP 31758) GN=hflK PE=4 SV=1
          Length = 420

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
 Frame = +2

Query: 158 GGSKEKKEPFLKSRNE---KGGSVSDKGKRNHGHDGLDAL-----KKLS-----GLGRGG 298
           G + + ++P+  S N     GG+ ++KG R+ G   LD +     KKLS     G G GG
Sbjct: 7   GNNGQDRDPWGSSNNNGGNSGGNNNNKGGRDQGPPDLDDIFRKLSKKLSSLGGKGSGSGG 66

Query: 299 NGKSH 313
           NG SH
Sbjct: 67  NGASH 71


>tr|A4VZI6|A4VZI6_STRS2 Putative uncharacterized protein
           OS=Streptococcus suis (strain 98HAH33) GN=SSU98_0367
           PE=4 SV=1
          Length = 1367

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
 Frame = -1

Query: 506 DATRASKSLSVSHINVNTHTLATQCKHDHHPSK-NAEIFKTCVSTSHRRNPLLC---IVT 339
           D++ + K L+V  INV    +  Q  H  HP      IFKT +S + RR PLL    IV 
Sbjct: 128 DSSESGKKLNVRQINVIEGKIINQLLHQIHPKHVKKSIFKT-LSRTPRRIPLLLTVYIVL 186

Query: 338 FYLT 327
           F++T
Sbjct: 187 FFIT 190