DK949176 |
Clone id |
TST38A01NGRL0005_E15 |
Library |
TST38 |
Length |
617 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_E15. 5' end sequence. |
Accession |
DK949176 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL2877Contig1 |
Sequence |
CTTGCGTATCAAGATGCCATCAGCAATGATTCAAACAACTCATTGCTACTTGCTAATTAT GCACAGTTTCTCTTCCTCGTACGCAAGGATCATGACAGAGCGGAGGAGCTCTTTCGAAAA GCGGTAGTATGCGACCCATTCGATTGTGATGCAATAGGTCGATTTGCAAGCTTTCTATGG CTGGCCCGGCGTAATCTTGGAGCGGCTGAAAAAGCCTATCAAGCAGCCTTACGAGCAGAT CCTGCCAACTCTTTCCATGCAGCTAACTATGCGCATTTCCTCTGGAACTCAGGCTTGTAG CTTCTTGATATGTTTGTGCTTCAATTCAATGCGTGAATATCTGGAACATAACAAGGAGGT GCGGCTTCATTTTTATTGGGGGGTTTGGTGCAATATTCTTGCTTGGTGGTAACAGGTCAG AAGGCTTCCTTTTTTGTCTTATCATTGACAAAGGGAGGGGGGGATGTAGAATGTTGATGT TAAGGCCGTCCAGTGGCGGCTTGTACAGCAAAAGTGTCTCGTCTGCAAGGACATTTTCTC TGTGCACTATCCCACGATTCTTCAAGTTTATAAGGAACTCTGCAAAGTTCTTAGTGTTTA AAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54J83 |
Definition |
sp|Q54J83|APC3_DICDI Anaphase-promoting complex subunit 3 OS=Dictyostelium discoideum |
Align length |
71 |
Score (bit) |
37.0 |
E-value |
0.076 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5N7T3 |
Definition |
tr|Q5N7T3|Q5N7T3_ORYSJ Peroxidase-like protein (Os01g0855200 protein) OS=Oryza sativa subsp. japonica |
Align length |
96 |
Score (bit) |
113.0 |
E-value |
1.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949176|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_E15, 5' (599 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5N7T3|Q5N7T3_ORYSJ Peroxidase-like protein (Os01g0855200 pro... 113 1e-23 tr|B8ACG3|B8ACG3_ORYSI Putative uncharacterized protein OS=Oryza... 113 1e-23 tr|B6U0L7|B6U0L7_MAIZE Putative uncharacterized protein OS=Zea m... 112 2e-23 tr|Q688J0|Q688J0_ORYSJ Os05g0447700 protein OS=Oryza sativa subs... 112 2e-23 tr|A2Y583|A2Y583_ORYSI Putative uncharacterized protein OS=Oryza... 110 6e-23 tr|A7NYI9|A7NYI9_VITVI Chromosome chr6 scaffold_3, whole genome ... 110 8e-23 tr|Q8GW79|Q8GW79_ARATH Putative uncharacterized protein At2g2967... 108 2e-22 tr|O82388|O82388_ARATH Expressed protein (At2g29670/T27A16.23) (... 108 2e-22 tr|A9TDI7|A9TDI7_PHYPA Predicted protein OS=Physcomitrella paten... 107 5e-22 tr|A9T6F7|A9T6F7_PHYPA Predicted protein OS=Physcomitrella paten... 107 5e-22 tr|B6SSS3|B6SSS3_MAIZE Putative uncharacterized protein OS=Zea m... 107 7e-22 tr|Q8VZC8|Q8VZC8_ARATH At1g07280/F22G5_32 OS=Arabidopsis thalian... 103 6e-21 tr|B7FM44|B7FM44_MEDTR Putative uncharacterized protein OS=Medic... 101 4e-20 tr|A9U3W7|A9U3W7_PHYPA Predicted protein OS=Physcomitrella paten... 100 8e-20 tr|Q9SD65|Q9SD65_ARATH Putative uncharacterized protein F13I12.1... 99 1e-19 tr|A7Q3D8|A7Q3D8_VITVI Chromosome chr13 scaffold_48, whole genom... 94 8e-18 tr|A5C7B4|A5C7B4_VITVI Putative uncharacterized protein OS=Vitis... 94 8e-18 tr|A9S3E2|A9S3E2_PHYPA Predicted protein OS=Physcomitrella paten... 91 4e-17 tr|Q9LNU7|Q9LNU7_ARATH F22G5.38 OS=Arabidopsis thaliana PE=4 SV=1 80 7e-14 tr|Q8LNF3|Q8LNF3_ORYSJ Putative peroxidase OS=Oryza sativa subsp... 78 4e-13 tr|Q337F8|Q337F8_ORYSJ Os10g0501900 protein OS=Oryza sativa subs... 78 4e-13 tr|A2Z924|A2Z924_ORYSI Putative uncharacterized protein OS=Oryza... 78 4e-13 tr|Q7MVN6|Q7MVN6_PORGI TPR domain protein OS=Porphyromonas gingi... 68 4e-10 tr|B4D5L0|B4D5L0_9BACT RNA-processing protein HAT helix repeatin... 68 5e-10 tr|B8LR76|B8LR76_PICSI Putative uncharacterized protein OS=Picea... 67 6e-10 tr|A9NT82|A9NT82_PICSI Putative uncharacterized protein OS=Picea... 66 1e-09 tr|B2RKG4|B2RKG4_PORG3 Putative uncharacterized protein OS=Porph... 66 2e-09 tr|B4FUN5|B4FUN5_MAIZE Putative uncharacterized protein OS=Zea m... 65 2e-09 tr|B6TXK5|B6TXK5_MAIZE Putative uncharacterized protein OS=Zea m... 65 3e-09 tr|Q10RZ6|Q10RZ6_ORYSJ Os03g0140700 protein OS=Oryza sativa subs... 65 4e-09
>tr|Q5N7T3|Q5N7T3_ORYSJ Peroxidase-like protein (Os01g0855200 protein) OS=Oryza sativa subsp. japonica GN=B1096A10.34 PE=4 SV=1 Length = 512
Score = 113 bits (282), Expect = 1e-23 Identities = 50/96 (52%), Positives = 70/96 (72%) Frame = +1
Query: 7 YQDAIXXXXXXXXXXANYAQFLFLVRKDHDRAEELFRKAVVCDPFDCDAIGRFASFLWLA 186 Y+ A+ +N+AQFL+ V++DHDRAE F++AV +P D +A+GR+A+FLW A Sbjct: 408 YERAVSEEPDNSLLLSNFAQFLYTVQRDHDRAEHYFKRAVRAEPADAEAMGRYATFLWKA 467
Query: 187 RRNLGAAEKAYQAALRADPANSFHAANYAHFLWNSG 294 R +L AAE+ YQ A+ A+P+NS HAA YAHFLWN+G Sbjct: 468 RNDLAAAEETYQEAIAAEPSNSHHAAAYAHFLWNTG 503
>tr|B8ACG3|B8ACG3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04480 PE=4 SV=1 Length = 759
Score = 113 bits (282), Expect = 1e-23 Identities = 50/96 (52%), Positives = 70/96 (72%) Frame = +1
Query: 7 YQDAIXXXXXXXXXXANYAQFLFLVRKDHDRAEELFRKAVVCDPFDCDAIGRFASFLWLA 186 Y+ A+ +N+AQFL+ V++DHDRAE F++AV +P D +A+GR+A+FLW A Sbjct: 655 YERAVSEEPDNSLLLSNFAQFLYTVQRDHDRAEHYFKRAVRAEPADAEAMGRYATFLWKA 714
Query: 187 RRNLGAAEKAYQAALRADPANSFHAANYAHFLWNSG 294 R +L AAE+ YQ A+ A+P+NS HAA YAHFLWN+G Sbjct: 715 RNDLAAAEETYQEAIAAEPSNSHHAAAYAHFLWNTG 750
>tr|B6U0L7|B6U0L7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 499
Score = 112 bits (280), Expect = 2e-23 Identities = 51/96 (53%), Positives = 66/96 (68%) Frame = +1
Query: 7 YQDAIXXXXXXXXXXANYAQFLFLVRKDHDRAEELFRKAVVCDPFDCDAIGRFASFLWLA 186 Y+ A+ AN+AQFL+LV+ DHDRAE F +AV +P D +A+ R+A+FLW A Sbjct: 390 YEQAVAAEPNNPLILANFAQFLYLVQNDHDRAEHYFERAVRAEPADSEALSRYATFLWKA 449
Query: 187 RRNLGAAEKAYQAALRADPANSFHAANYAHFLWNSG 294 R +L AE AYQ A+ ADP N+ HAA YAHFLWN+G Sbjct: 450 RNDLAGAEDAYQEAIAADPGNAHHAAAYAHFLWNTG 485
Score = 48.1 bits (113), Expect = 4e-04 Identities = 22/68 (32%), Positives = 40/68 (58%) Frame = +1
Query: 88 DHDRAEELFRKAVVCDPFDCDAIGRFASFLWLARRNLGAAEKAYQAALRADPANSFHAAN 267 +H ++ + +AV +P + + FA FL+L + + AE ++ A+RA+PA+S + Sbjct: 382 EHTLTQQRYEQAVAAEPNNPLILANFAQFLYLVQNDHDRAEHYFERAVRAEPADSEALSR 441
Query: 268 YAHFLWNS 291 YA FLW + Sbjct: 442 YATFLWKA 449
>tr|Q688J0|Q688J0_ORYSJ Os05g0447700 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0012G21.7 PE=2 SV=1 Length = 484
Score = 112 bits (279), Expect = 2e-23 Identities = 51/96 (53%), Positives = 67/96 (69%) Frame = +1
Query: 7 YQDAIXXXXXXXXXXANYAQFLFLVRKDHDRAEELFRKAVVCDPFDCDAIGRFASFLWLA 186 Y+ A+ AN+AQFL+LV+ DHDRAE+ F +AV +P D +A+ R+A+FLW A Sbjct: 380 YELAVSEEPNNPLILANFAQFLYLVQNDHDRAEQYFERAVRAEPADAEALSRYATFLWKA 439
Query: 187 RRNLGAAEKAYQAALRADPANSFHAANYAHFLWNSG 294 R +L AAE YQ A+ ADP N+ HAA YAHFLWN+G Sbjct: 440 RNDLAAAEDTYQEAIAADPGNAHHAAAYAHFLWNTG 475
Score = 45.8 bits (107), Expect = 0.002 Identities = 22/68 (32%), Positives = 41/68 (60%) Frame = +1
Query: 88 DHDRAEELFRKAVVCDPFDCDAIGRFASFLWLARRNLGAAEKAYQAALRADPANSFHAAN 267 ++ R E+ + AV +P + + FA FL+L + + AE+ ++ A+RA+PA++ + Sbjct: 372 EYTRTEQRYELAVSEEPNNPLILANFAQFLYLVQNDHDRAEQYFERAVRAEPADAEALSR 431
Query: 268 YAHFLWNS 291 YA FLW + Sbjct: 432 YATFLWKA 439
>tr|A2Y583|A2Y583_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20153 PE=4 SV=1 Length = 484
Score = 110 bits (275), Expect = 6e-23 Identities = 50/96 (52%), Positives = 66/96 (68%) Frame = +1
Query: 7 YQDAIXXXXXXXXXXANYAQFLFLVRKDHDRAEELFRKAVVCDPFDCDAIGRFASFLWLA 186 Y+ A+ AN+AQFL+LV+ DHDRAE+ F +AV +P D + + R+A+FLW A Sbjct: 380 YELAVSEEPNNPLILANFAQFLYLVQNDHDRAEQYFERAVRAEPADAEVLSRYATFLWKA 439
Query: 187 RRNLGAAEKAYQAALRADPANSFHAANYAHFLWNSG 294 R +L AAE YQ A+ ADP N+ HAA YAHFLWN+G Sbjct: 440 RNDLAAAEDTYQEAIAADPGNAHHAAAYAHFLWNTG 475
Score = 45.4 bits (106), Expect = 0.002 Identities = 22/68 (32%), Positives = 41/68 (60%) Frame = +1
Query: 88 DHDRAEELFRKAVVCDPFDCDAIGRFASFLWLARRNLGAAEKAYQAALRADPANSFHAAN 267 ++ R E+ + AV +P + + FA FL+L + + AE+ ++ A+RA+PA++ + Sbjct: 372 EYTRTEQRYELAVSEEPNNPLILANFAQFLYLVQNDHDRAEQYFERAVRAEPADAEVLSR 431
Query: 268 YAHFLWNS 291 YA FLW + Sbjct: 432 YATFLWKA 439
>tr|A7NYI9|A7NYI9_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024138001 PE=4 SV=1 Length = 453
Score = 110 bits (274), Expect = 8e-23 Identities = 49/98 (50%), Positives = 71/98 (72%) Frame = +1
Query: 1 LAYQDAIXXXXXXXXXXANYAQFLFLVRKDHDRAEELFRKAVVCDPFDCDAIGRFASFLW 180 L YQ + ANYAQFL+LV D+DRAEE F++A+ +P D +A ++ASFLW Sbjct: 339 LLYQMGLAREPNNPLLLANYAQFLYLVAHDYDRAEEYFKRAIAVEPPDAEAYNKYASFLW 398
Query: 181 LARRNLGAAEKAYQAALRADPANSFHAANYAHFLWNSG 294 +A+++L AAE+ Y A+ ADP+N+++AANYAHFLW++G Sbjct: 399 VAKKDLWAAEETYLEAIAADPSNTYYAANYAHFLWSTG 436
>tr|Q8GW79|Q8GW79_ARATH Putative uncharacterized protein At2g29670 OS=Arabidopsis thaliana GN=At2g29670 PE=2 SV=1 Length = 536
Score = 108 bits (270), Expect = 2e-22 Identities = 51/98 (52%), Positives = 68/98 (69%) Frame = +1
Query: 1 LAYQDAIXXXXXXXXXXANYAQFLFLVRKDHDRAEELFRKAVVCDPFDCDAIGRFASFLW 180 L YQ + ANYAQFL+LV DHDRAEE F++AV +P D +A ++A+FLW Sbjct: 422 LMYQTELSQEPNNPLLLANYAQFLYLVSNDHDRAEEYFKRAVGVEPKDAEAFSKYATFLW 481
Query: 181 LARRNLGAAEKAYQAALRADPANSFHAANYAHFLWNSG 294 AR +L AAE+ + A+ ADP NS++AANYA+FLWN+G Sbjct: 482 RARDDLWAAEETFLEAIDADPTNSYYAANYANFLWNTG 519
>tr|O82388|O82388_ARATH Expressed protein (At2g29670/T27A16.23) (Putative uncharacterized protein At2g29670) OS=Arabidopsis thaliana GN=At2g29670 PE=2 SV=2 Length = 536
Score = 108 bits (270), Expect = 2e-22 Identities = 51/98 (52%), Positives = 68/98 (69%) Frame = +1
Query: 1 LAYQDAIXXXXXXXXXXANYAQFLFLVRKDHDRAEELFRKAVVCDPFDCDAIGRFASFLW 180 L YQ + ANYAQFL+LV DHDRAEE F++AV +P D +A ++A+FLW Sbjct: 422 LMYQTELSQEPNNPLLLANYAQFLYLVSNDHDRAEEYFKRAVGVEPKDAEAFSKYATFLW 481
Query: 181 LARRNLGAAEKAYQAALRADPANSFHAANYAHFLWNSG 294 AR +L AAE+ + A+ ADP NS++AANYA+FLWN+G Sbjct: 482 RARDDLWAAEETFLEAIDADPTNSYYAANYANFLWNTG 519
>tr|A9TDI7|A9TDI7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169439 PE=4 SV=1 Length = 604
Score = 107 bits (267), Expect = 5e-22 Identities = 49/96 (51%), Positives = 66/96 (68%) Frame = +1
Query: 1 LAYQDAIXXXXXXXXXXANYAQFLFLVRKDHDRAEELFRKAVVCDPFDCDAIGRFASFLW 180 L YQ AI +NYAQFL++VR D++RAEE F +A+ DP D + +GRFA+FLW Sbjct: 492 LEYQHAIDMQPTNVMLLSNYAQFLYVVRHDNNRAEEYFHRAICADPSDGEVLGRFATFLW 551
Query: 181 LARRNLGAAEKAYQAALRADPANSFHAANYAHFLWN 288 LAR + AE+A++AA DP N +HA NY+HFLW+ Sbjct: 552 LARGDKETAERAFRAAAALDPTNPYHAGNYSHFLWH 587
>tr|A9T6F7|A9T6F7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_168339 PE=4 SV=1 Length = 604
Score = 107 bits (267), Expect = 5e-22 Identities = 50/97 (51%), Positives = 67/97 (69%) Frame = +1
Query: 1 LAYQDAIXXXXXXXXXXANYAQFLFLVRKDHDRAEELFRKAVVCDPFDCDAIGRFASFLW 180 L YQ AI +NYAQFL++VR D++ AEE F +A+ DP D + +GRFA+FLW Sbjct: 495 LEYQHAISLQPNNVMLLSNYAQFLYVVRHDNNMAEEYFHRAIRADPSDGEVLGRFANFLW 554
Query: 181 LARRNLGAAEKAYQAALRADPANSFHAANYAHFLWNS 291 LAR + AE+A++AA DPAN +HA NY+HFLW+S Sbjct: 555 LARGDKETAERAFRAAAALDPANPYHAGNYSHFLWHS 591
Score = 38.5 bits (88), Expect = 0.30 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = +1
Query: 58 YAQFLFLVRKDHDRAEELFRKAVVCDPFDCDAIGRFASFLWLARRN 195 +A FL+L R D + AE FR A DP + G ++ FLW + N Sbjct: 549 FANFLWLARGDKETAERAFRAAAALDPANPYHAGNYSHFLWHSESN 594
|