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NBDC - LSDB Archive
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DK949185
Clone id TST38A01NGRL0005_E24
Library
Length 686
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_E24. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GTATCTCCAGCCGTGCGTGTAGGCGCATATAGACGTAGCCAGCCAAGTTGTTTTGCGCGC
TCATGTTCGACTGCGTGCTTCTGTCGGTGCTCCAAGTCAGCTGCCCCTCTGATAGCAGTT
TGCTGCAGCGGCGAGGTACTCGATGGTGAGGCGCAAGATCAAAATCAAGCGGATCGAGAA
TGCGACGACGCGGCAGGTGACATTCTCGAAGCGGAGGGGCGGGCTGCTGAAGAAGGCGCA
CGATCTGTCGGTGTTGTGCGATGCGGAGGTGGGCGTCATCGTCTTCTCCAGCAAGGGCAA
GCTCTTCCAGTTTGCCAACACCAGTATGCAAACTGTGCTGGAAAGATATGTAAAGGCCAA
CCGGGATGCAGACTCACCTGACAACAACAGCTCGACAGATAATGTAGAGGCTGATCGGCT
GGCTCAGTTCACAGAGAATTTGAAGAGTTTGCAGAGTACTGTGATTGGCAACGATTTGGA
GCGTCTTTCCTTAAGGGATCTCATCCATTTAGAACAACAAATTCATGAGAGCTTAGGACG
CATTAGAGCCAAAAAGGAAGAACTCATTGTAGATCAACTTGAGGATTTCAAGCAAAAGGT
GGCAGAACAGCGAAGGATAACAAATGCAAACTCCAGCATTTTGGACAAGCTAGTGGATTT
TTGTTCCTCTGATGTAACTGGCTCTC
■■Homology search results ■■ -
sp_hit_id Q40704
Definition sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
Align length 177
Score (bit) 142.0
E-value 2.0e-33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949185|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_E24, 5'
         (686 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza s...   142   2e-33
sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Bra...   140   6e-33
sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza ...   139   1e-32
sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana ...   139   1e-32
sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN...   139   2e-32
sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hy...   139   2e-32
sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza ...   136   9e-32
sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabi...   136   9e-32
sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thalia...   135   2e-31
sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza s...   135   2e-31
sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza s...   135   2e-31
sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Ara...   135   2e-31
sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Ara...   134   6e-31
sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabi...   133   8e-31
sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax gins...   132   1e-30
sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidop...   132   2e-30
sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis...   131   3e-30
sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum ly...   131   4e-30
sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Ara...   131   4e-30
sp|O22456|SEP3_ARATH Developmental protein SEPALLATA 3 OS=Arabid...   130   5e-30
sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog ...   130   7e-30
sp|P35631|AP1_ARATH Floral homeotic protein APETALA 1 OS=Arabido...   130   9e-30
sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza ...   129   1e-29
sp|Q8VWM8|M17_MAIZE MADS-box protein ZMM17 OS=Zea mays GN=M17 PE...   129   1e-29
sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza ...   129   2e-29
sp|Q03489|AGL9_PETHY Agamous-like MADS-box protein AGL9 homolog ...   129   2e-29
sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Ara...   129   2e-29
sp|Q0J466|MADS7_ORYSJ MADS-box transcription factor 7 OS=Oryza s...   128   3e-29
sp|P0C5B0|MADS7_ORYSI MADS-box transcription factor 7 OS=Oryza s...   128   3e-29
sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza s...   128   3e-29

>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza
           sativa subsp. japonica GN=MADS3 PE=2 SV=1
          Length = 236

 Score =  142 bits (357), Expect = 2e-33
 Identities = 77/177 (43%), Positives = 120/177 (67%), Gaps = 5/177 (2%)
 Frame = +2

Query: 143 MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANT 322
           M R KI+IKRIEN T RQVTF KRR GLLKKA++LSVLCDAEV +IVFSS+G+L+++AN 
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 60

Query: 323 SMQTVLERYVKANRDADS----PDNNSSTDNVEADRLAQFTENLKSLQS-TVIGNDLERL 487
           S+++ +ERY KAN D  +     + N+     E+ +L Q   +L++  S T++G+ +  +
Sbjct: 61  SVKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTM 120

Query: 488 SLRDLIHLEQQIHESLGRIRAKKEELIVDQLEDFKQKVAEQRRITNANSSILDKLVD 658
           SLRDL  +E ++ + + +IRA+K EL+  ++E  +++  E   + N N  +  K+V+
Sbjct: 121 SLRDLKQVENRLEKGIAKIRARKNELLYAEVEYMQKREVE---LQNDNMYLRSKVVE 174


>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15
           OS=Brassica napus GN=AGL15 PE=3 SV=1
          Length = 264

 Score =  140 bits (353), Expect = 6e-33
 Identities = 84/161 (52%), Positives = 105/161 (65%), Gaps = 4/161 (2%)
 Frame = +2

Query: 143 MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANT 322
           M R KI+IKRIENA +RQVTFSKRR GLLKKAH+LSVLCDAEV VIVFS  GKLF+F++T
Sbjct: 1   MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSST 60

Query: 323 SMQTVLERYVKANRDADSPDNNSSTDN----VEADRLAQFTENLKSLQSTVIGNDLERLS 490
           SM+  L RY      +D P  N  T+N     E D L      L+     + G  L  LS
Sbjct: 61  SMKKTLLRYGNYQISSDVPGINCKTENQEECTEVDLLKDEISMLQEKHLHMQGKPLNLLS 120

Query: 491 LRDLIHLEQQIHESLGRIRAKKEELIVDQLEDFKQKVAEQR 613
           L++L HLE+Q++ SL  +R +KE L+  QLE+ + K  EQR
Sbjct: 121 LKELQHLEKQLNFSLISVRERKELLLTKQLEESRLK--EQR 159


>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza
           sativa subsp. japonica GN=MADS58 PE=2 SV=1
          Length = 272

 Score =  139 bits (351), Expect = 1e-32
 Identities = 74/174 (42%), Positives = 116/174 (66%), Gaps = 4/174 (2%)
 Frame = +2

Query: 149 RRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANTSM 328
           R KI+IKRIEN T RQVTF KRR GLLKKA++LSVLCDAEV ++VFSS+G+L++++N S+
Sbjct: 45  RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSV 104

Query: 329 QTVLERYVKANRDADSPDN----NSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLSLR 496
           +  +ERY KAN D  +       N+     EA +L Q   NL++   T++G+++  ++ R
Sbjct: 105 KETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHR 164

Query: 497 DLIHLEQQIHESLGRIRAKKEELIVDQLEDFKQKVAEQRRITNANSSILDKLVD 658
           +L  LE ++ + LG+IRA+K EL+  ++E  +++  E   + N N  +  K+ +
Sbjct: 165 ELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETE---LQNDNMYLKSKVAE 215


>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana
           tabacum GN=AG1 PE=2 SV=1
          Length = 248

 Score =  139 bits (351), Expect = 1e-32
 Identities = 74/154 (48%), Positives = 107/154 (69%), Gaps = 4/154 (2%)
 Frame = +2

Query: 149 RRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANTSM 328
           R KI+IKRIEN T RQVTF KRR GLLKKA++LSVLCDAEV +IVFSS+G+L+++AN S+
Sbjct: 19  RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 78

Query: 329 QTVLERYVKANRDADS----PDNNSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLSLR 496
           +  +ERY KA  D+ +     + N+     EA +L     NL++    ++G  L  LSLR
Sbjct: 79  KATIERYKKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLR 138

Query: 497 DLIHLEQQIHESLGRIRAKKEELIVDQLEDFKQK 598
           DL +LEQ+I + + +IR+KK EL+  ++E  +++
Sbjct: 139 DLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKR 172


>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon
           GN=GGM13 PE=2 SV=1
          Length = 237

 Score =  139 bits (349), Expect = 2e-32
 Identities = 78/174 (44%), Positives = 118/174 (67%), Gaps = 2/174 (1%)
 Frame = +2

Query: 143 MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQF--A 316
           M R KI+IKRIEN T RQVTFSKRRGGLLKKAH+LSVLCDAE+G+I+FSS GKLF++  A
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSA 60

Query: 317 NTSMQTVLERYVKANRDADSPDNNSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLSLR 496
           ++SM+ ++ERY K +  A   + ++     E  R+    E L++    ++G DL  L++ 
Sbjct: 61  SSSMKKIIERYQKVS-GARITEYDNQHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLTMT 119

Query: 497 DLIHLEQQIHESLGRIRAKKEELIVDQLEDFKQKVAEQRRITNANSSILDKLVD 658
           +L HL QQ+  +  R+R++K +L++ QLE+ ++K   +R + + NS +   L +
Sbjct: 120 ELHHLGQQLESASSRVRSRKNQLMLQQLENLRRK---ERILEDQNSHLCRLLAE 170


>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia
           hybrida GN=AG1 PE=2 SV=1
          Length = 242

 Score =  139 bits (349), Expect = 2e-32
 Identities = 74/154 (48%), Positives = 106/154 (68%), Gaps = 4/154 (2%)
 Frame = +2

Query: 149 RRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANTSM 328
           R KI+IKRIEN T RQVTF KRR GLLKKA++LSVLCDAEV +IVFSS+G+L+++AN S+
Sbjct: 19  RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 78

Query: 329 QTVLERYVKANRDADS----PDNNSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLSLR 496
           +  +ERY KA  D+ +     + N+     EA +L     NL++     +G  L  L+LR
Sbjct: 79  KATIERYKKACSDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLR 138

Query: 497 DLIHLEQQIHESLGRIRAKKEELIVDQLEDFKQK 598
           DL +LEQ+I + + +IRAKK EL+  ++E  +++
Sbjct: 139 DLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKR 172


>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza
           sativa subsp. japonica GN=MADS23 PE=2 SV=1
          Length = 159

 Score =  136 bits (343), Expect = 9e-32
 Identities = 72/156 (46%), Positives = 105/156 (67%), Gaps = 3/156 (1%)
 Frame = +2

Query: 143 MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANT 322
           M R KI+IKRI+NAT+RQVTFSKRR GL KKA +LS+LCDAEVG++VFSS  +L+ FA++
Sbjct: 1   MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS 60

Query: 323 SMQTVLERYVKANRDADSPDNNSSTDNV---EADRLAQFTENLKSLQSTVIGNDLERLSL 493
           SM++++ERY +   D     N SS   +   EA  L Q   NL+     ++G  L  L +
Sbjct: 61  SMKSIIERYNETKEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDV 120

Query: 494 RDLIHLEQQIHESLGRIRAKKEELIVDQLEDFKQKV 601
            DL +LE ++  SL  IR +K+ +++DQ+++  +KV
Sbjct: 121 EDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRKV 156


>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5
           OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1
          Length = 246

 Score =  136 bits (343), Expect = 9e-32
 Identities = 70/174 (40%), Positives = 117/174 (67%), Gaps = 4/174 (2%)
 Frame = +2

Query: 149 RRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANTSM 328
           R KI+IKRIEN T RQVTF KRR GLLKKA++LSVLCDAEV +++FS++G+L+++AN S+
Sbjct: 18  RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSV 77

Query: 329 QTVLERYVKANRDADSP----DNNSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLSLR 496
           +  +ERY KA  DA +P    + N+     EA +L +   ++++L   ++G  L  L+ +
Sbjct: 78  RGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFK 137

Query: 497 DLIHLEQQIHESLGRIRAKKEELIVDQLEDFKQKVAEQRRITNANSSILDKLVD 658
           +L +LE ++ + + R+R+KK E++V ++E  +++  E   + N N  +  K+ +
Sbjct: 138 ELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIE---LQNDNMYLRSKITE 188


>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana
           GN=SOC1 PE=1 SV=1
          Length = 214

 Score =  135 bits (341), Expect = 2e-31
 Identities = 73/173 (42%), Positives = 114/173 (65%), Gaps = 4/173 (2%)
 Frame = +2

Query: 143 MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANT 322
           MVR K ++KRIENAT+RQVTFSKRR GLLKKA +LSVLCDAEV +I+FS KGKL++FA++
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 323 SMQTVLERYVKANRDADS----PDNNSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLS 490
           +MQ  ++RY++  +D  S     + N      EA  + +  E L++ +  ++G  +   S
Sbjct: 61  NMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCS 120

Query: 491 LRDLIHLEQQIHESLGRIRAKKEELIVDQLEDFKQKVAEQRRITNANSSILDK 649
           + +L  +EQQ+ +S+  IRA+K ++  +Q+E  KQK   ++ +   N  + +K
Sbjct: 121 IEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQK---EKALAAENEKLSEK 170


>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza
           sativa subsp. japonica GN=MADS1 PE=1 SV=1
          Length = 257

 Score =  135 bits (340), Expect = 2e-31
 Identities = 78/182 (42%), Positives = 121/182 (66%), Gaps = 4/182 (2%)
 Frame = +2

Query: 143 MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANT 322
           M R K+++KRIEN  +RQVTF+KRR GLLKKA++LS+LCDAEV +I+FS +G+LF+F+++
Sbjct: 1   MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60

Query: 323 S-MQTVLERYVKAN---RDADSPDNNSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLS 490
           S M   LERY   N   +DA +P+N  +    E  +L    E L++ Q  ++G DL  LS
Sbjct: 61  SCMYKTLERYRSCNYNSQDAAAPENEINYQ--EYLKLKTRVEFLQTTQRNILGEDLGPLS 118

Query: 491 LRDLIHLEQQIHESLGRIRAKKEELIVDQLEDFKQKVAEQRRITNANSSILDKLVDFCSS 670
           +++L  LE QI  SL +IR++K + ++DQL D K K   ++++ + N  +  KL +  + 
Sbjct: 119 MKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSK---EQQLQDLNKDLRKKLQETSAE 175

Query: 671 DV 676
           +V
Sbjct: 176 NV 177
tr_hit_id O82094
Definition tr|O82094|O82094_CERRI MADS-box protein OS=Ceratopteris richardii
Align length 181
Score (bit) 291.0
E-value 2.0e-77
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949185|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_E24, 5'
         (686 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O82094|O82094_CERRI MADS-box protein OS=Ceratopteris richardi...   291   2e-77
tr|O04102|O04102_CERRI Homeotic protein OS=Ceratopteris richardi...   291   2e-77
tr|O82092|O82092_CERRI CMADS2 OS=Ceratopteris richardii GN=CMADS...   289   1e-76
tr|O65800|O65800_CERRI Transcription factor OS=Ceratopteris rich...   261   2e-68
tr|O23766|O23766_9FILI Putative MADS domain transcription factor...   241   4e-62
tr|O23765|O23765_9FILI Putative MADS domain transcription factor...   226   1e-57
tr|O04100|O04100_9FILI Homeotic protein (Fragment) OS=Ceratopter...   166   1e-39
tr|O82095|O82095_CERRI MADS-box protein OS=Ceratopteris richardi...   156   1e-36
tr|Q8LPA5|Q8LPA5_PHYPA MADS-box protein PpMADS1 OS=Physcomitrell...   154   7e-36
tr|A9TMQ2|A9TMQ2_PHYPA MIKCC MADS-domain protein PpMADS1 OS=Phys...   154   7e-36
tr|Q6QAF0|Q6QAF0_PHYPA MIKC-type MADS-box protein OS=Physcomitre...   152   1e-35
tr|A9TDM3|A9TDM3_PHYPA MIKCC MADS-domain protein PPMC6 OS=Physco...   152   2e-35
tr|O24487|O24487_PINRA Putative MADS box transcription factor Pr...   149   2e-34
tr|Q58A80|Q58A80_GINBI MADS-box transcription factor GbMADS3 OS=...   148   3e-34
tr|Q7FZQ7|Q7FZQ7_PHYPA MADS-domain protein PPM1 OS=Physcomitrell...   148   4e-34
tr|A9SU11|A9SU11_PHYPA MIKCC MADS-domain protein PPM1 OS=Physcom...   148   4e-34
tr|Q9FE71|Q9FE71_PHYPA MADS-domain protein PPM1 OS=Physcomitrell...   147   5e-34
tr|A9T625|A9T625_PHYPA MIKCC MADS-domain protein PpMADS-S OS=Phy...   147   6e-34
tr|Q8LLC8|Q8LLC8_LYCAN MADS-box gene 2 protein OS=Lycopodium ann...   147   8e-34
tr|A9NMI5|A9NMI5_PICSI Putative uncharacterized protein OS=Picea...   145   2e-33
tr|Q84UJ6|Q84UJ6_SELRE MADS-box transcription factor SrMADS1 (Fr...   145   2e-33
tr|A9RSQ1|A9RSQ1_PHYPA MIKCC MADS-domain protein PPMC5 OS=Physco...   144   4e-33
tr|Q9XGK6|Q9XGK6_GNEGN Putative MADS domain transcription factor...   144   7e-33
tr|Q9FE89|Q9FE89_PHYPA MADS-domain protein PPM2 (Putative MADS-d...   142   2e-32
tr|A9S8C4|A9S8C4_PHYPA MIKCC MADS-domain protein PPM2 OS=Physcom...   142   2e-32
tr|B1N7Z8|B1N7Z8_NARTA MADS box transcription factor OS=Narcissu...   142   2e-32
tr|Q2IA04|Q2IA04_DENCR AGAMOUS-like transcription factor OS=Dend...   142   3e-32
tr|O24489|O24489_PINRA Putative MADS box transcription factor Pr...   140   6e-32
tr|Q75V01|Q75V01_9ASPA MADS-box transcription factor OS=Asparagu...   140   8e-32
tr|Q2TDX2|Q2TDX2_AMBTC AGL6 OS=Amborella trichopoda GN=AGL6 PE=2...   140   8e-32

>tr|O82094|O82094_CERRI MADS-box protein OS=Ceratopteris richardii
           GN=CMADS3 PE=2 SV=1
          Length = 238

 Score =  291 bits (746), Expect = 2e-77
 Identities = 147/181 (81%), Positives = 166/181 (91%)
 Frame = +2

Query: 143 MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANT 322
           MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEV VI+FSSKGKLFQFAN 
Sbjct: 1   MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVAVIIFSSKGKLFQFANP 60

Query: 323 SMQTVLERYVKANRDADSPDNNSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLSLRDL 502
           SM+TVL RYVKA+RD ++ DN SSTDNVEADRL  FTE LK LQS VIG+DLERLSLRDL
Sbjct: 61  SMETVLGRYVKASRDPEAGDNGSSTDNVEADRLTVFTEKLKMLQSNVIGDDLERLSLRDL 120

Query: 503 IHLEQQIHESLGRIRAKKEELIVDQLEDFKQKVAEQRRITNANSSILDKLVDFCSSDVTG 682
           IHLEQQ+HESLG IRAKK+ELI++Q+++FKQK+A+ RR TNAN+S+LD+LVDFCSS +TG
Sbjct: 121 IHLEQQVHESLGHIRAKKDELILEQIDEFKQKMADTRRTTNANTSMLDRLVDFCSSGITG 180

Query: 683 S 685
           S
Sbjct: 181 S 181


>tr|O04102|O04102_CERRI Homeotic protein OS=Ceratopteris richardii
           GN=CRM1 PE=2 SV=1
          Length = 238

 Score =  291 bits (746), Expect = 2e-77
 Identities = 147/181 (81%), Positives = 166/181 (91%)
 Frame = +2

Query: 143 MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANT 322
           MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEV VI+FSSKGKLFQFAN 
Sbjct: 1   MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVAVIIFSSKGKLFQFANP 60

Query: 323 SMQTVLERYVKANRDADSPDNNSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLSLRDL 502
           SM+TVL RYVKA+RD ++ DN SSTDNVEADRL  FTE LK LQS VIG+DLERLSLRDL
Sbjct: 61  SMETVLGRYVKASRDPEAGDNGSSTDNVEADRLTVFTEKLKMLQSNVIGDDLERLSLRDL 120

Query: 503 IHLEQQIHESLGRIRAKKEELIVDQLEDFKQKVAEQRRITNANSSILDKLVDFCSSDVTG 682
           IHLEQQ+HESLG IRAKK+ELI++Q+++FKQK+A+ RR TNAN+S+LD+LVDFCSS +TG
Sbjct: 121 IHLEQQVHESLGHIRAKKDELILEQIDEFKQKMADTRRTTNANTSMLDRLVDFCSSGITG 180

Query: 683 S 685
           S
Sbjct: 181 S 181


>tr|O82092|O82092_CERRI CMADS2 OS=Ceratopteris richardii GN=CMADS2
           PE=2 SV=1
          Length = 239

 Score =  289 bits (739), Expect = 1e-76
 Identities = 146/181 (80%), Positives = 164/181 (90%)
 Frame = +2

Query: 143 MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANT 322
           MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDA+VGVI+FSSKGKLFQFAN 
Sbjct: 1   MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDADVGVIIFSSKGKLFQFANP 60

Query: 323 SMQTVLERYVKANRDADSPDNNSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLSLRDL 502
           SM++VLERY KA  DA+S DN SS +N+E DR+  FTE LK+LQ  VIG+DLERLSLRDL
Sbjct: 61  SMKSVLERYYKAQGDAESADNVSSAENIEIDRITLFTEKLKALQRNVIGDDLERLSLRDL 120

Query: 503 IHLEQQIHESLGRIRAKKEELIVDQLEDFKQKVAEQRRITNANSSILDKLVDFCSSDVTG 682
           IHLEQQIHESLGRIRAKKEE+I+DQLEDFK+KV + R+ TNANSS+LDKL+DFCSSD+T 
Sbjct: 121 IHLEQQIHESLGRIRAKKEEMILDQLEDFKKKVTDARKTTNANSSLLDKLLDFCSSDMTS 180

Query: 683 S 685
           S
Sbjct: 181 S 181


>tr|O65800|O65800_CERRI Transcription factor OS=Ceratopteris
           richardii GN=CerMADS1 PE=2 SV=1
          Length = 215

 Score =  261 bits (668), Expect = 2e-68
 Identities = 132/181 (72%), Positives = 154/181 (85%)
 Frame = +2

Query: 143 MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANT 322
           MVR KIKIKRIENATTRQVTFSKRRGGL KKAHDLSVLCDAEV VI+FSSKGKLF F N 
Sbjct: 1   MVRTKIKIKRIENATTRQVTFSKRRGGLFKKAHDLSVLCDAEVAVIIFSSKGKLFHFGNP 60

Query: 323 SMQTVLERYVKANRDADSPDNNSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLSLRDL 502
           SM+TVL+RY+KAN D  + DN SSTDNVEAD L  FTE LK LQS VIG+DLERLS+RD+
Sbjct: 61  SMETVLKRYMKANGDPKAGDNGSSTDNVEADHLTVFTEKLKLLQSVVIGDDLERLSVRDI 120

Query: 503 IHLEQQIHESLGRIRAKKEELIVDQLEDFKQKVAEQRRITNANSSILDKLVDFCSSDVTG 682
           I+LEQQ HE+LGRIRAKK+EL++++  D  QK+A+ RR TN N+S+L++L DFCSSD+ G
Sbjct: 121 IYLEQQFHENLGRIRAKKDELMLERNNDLMQKMADTRRRTNVNTSMLNRLADFCSSDIIG 180

Query: 683 S 685
           S
Sbjct: 181 S 181


>tr|O23766|O23766_9FILI Putative MADS domain transcription factor
           (Fragment) OS=Ceratopteris pteridoides GN=CRM5 PE=2 SV=1
          Length = 217

 Score =  241 bits (614), Expect = 4e-62
 Identities = 119/160 (74%), Positives = 140/160 (87%)
 Frame = +2

Query: 206 SKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANTSMQTVLERYVKANRDADSPDN 385
           SKRRGGL+KKAHDLSVLCDA+V VI+FSSKGKLF FAN SM+TVL +YVKA+ D  + DN
Sbjct: 1   SKRRGGLIKKAHDLSVLCDADVAVIIFSSKGKLFHFANPSMETVLGKYVKASGDPGAGDN 60

Query: 386 NSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLSLRDLIHLEQQIHESLGRIRAKKEEL 565
            SSTDN++ DRL  FTE LK LQS VIG+DLERLSLRDLIHLEQQ+HESLGRIRAKK+EL
Sbjct: 61  GSSTDNLDTDRLTVFTEKLKMLQSNVIGDDLERLSLRDLIHLEQQVHESLGRIRAKKDEL 120

Query: 566 IVDQLEDFKQKVAEQRRITNANSSILDKLVDFCSSDVTGS 685
           I+DQ++DF QKVA+ R+  NA+ S+LD+LVDFCSSD+TGS
Sbjct: 121 ILDQIDDFNQKVADTRKTMNASMSMLDRLVDFCSSDITGS 160


>tr|O23765|O23765_9FILI Putative MADS domain transcription factor
           (Fragment) OS=Ceratopteris pteridoides GN=CRM4 PE=2 SV=1
          Length = 218

 Score =  226 bits (576), Expect = 1e-57
 Identities = 113/160 (70%), Positives = 134/160 (83%)
 Frame = +2

Query: 206 SKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANTSMQTVLERYVKANRDADSPDN 385
           SKRRGGL KKAHDLSVLCDAEV VI+FSSKGKLF F N SM+TVL+RY+KAN D  + DN
Sbjct: 1   SKRRGGLFKKAHDLSVLCDAEVAVIIFSSKGKLFHFGNPSMETVLKRYMKANGDPKAGDN 60

Query: 386 NSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLSLRDLIHLEQQIHESLGRIRAKKEEL 565
            SSTDNVEAD L  FTE LK LQS VIG+DLERLS+RD+I+LEQQ HE+LGRIRAKK+EL
Sbjct: 61  GSSTDNVEADHLTVFTEKLKLLQSVVIGDDLERLSVRDIIYLEQQFHENLGRIRAKKDEL 120

Query: 566 IVDQLEDFKQKVAEQRRITNANSSILDKLVDFCSSDVTGS 685
           ++++  D  QKVA+ RR TN N+S+L++L DFCSSD+ GS
Sbjct: 121 MLERNNDLMQKVADTRRRTNVNTSMLNRLADFCSSDIIGS 160


>tr|O04100|O04100_9FILI Homeotic protein (Fragment) OS=Ceratopteris
           pteridoides GN=CRM2 PE=2 SV=1
          Length = 199

 Score =  166 bits (421), Expect = 1e-39
 Identities = 87/143 (60%), Positives = 110/143 (76%)
 Frame = +2

Query: 257 CDAEVGVIVFSSKGKLFQFANTSMQTVLERYVKANRDADSPDNNSSTDNVEADRLAQFTE 436
           CD EVGVI+FSS+G+LFQFA+ SM +VL+RY+KA   A S DN SS  N+E DRL    +
Sbjct: 1   CDVEVGVIIFSSRGRLFQFASPSMPSVLKRYLKAQTGAKSADNGSSIKNLEIDRLTPLIQ 60

Query: 437 NLKSLQSTVIGNDLERLSLRDLIHLEQQIHESLGRIRAKKEELIVDQLEDFKQKVAEQRR 616
            LK+LQS +IG+DLE LSLRDLI+LEQQIH  LG IRAKKEE+I+D+L D K++VA+  R
Sbjct: 61  KLKALQSNIIGDDLEGLSLRDLIYLEQQIHRRLGCIRAKKEEMILDEL-DLKREVADSLR 119

Query: 617 ITNANSSILDKLVDFCSSDVTGS 685
            T  NSS+LDK+  F SS++T S
Sbjct: 120 TTKTNSSLLDKVGGFSSSEMTSS 142


>tr|O82095|O82095_CERRI MADS-box protein OS=Ceratopteris richardii
           GN=CMADS4 PE=2 SV=1
          Length = 240

 Score =  156 bits (394), Expect = 1e-36
 Identities = 83/155 (53%), Positives = 114/155 (73%), Gaps = 3/155 (1%)
 Frame = +2

Query: 143 MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANT 322
           M RRK+KIKRIEN  TRQ+TFSKRR GL KKAHDLSVLCDA+V VIVFS KG+LF+FA+ 
Sbjct: 1   MPRRKVKIKRIENGATRQITFSKRRAGLFKKAHDLSVLCDAKVAVIVFSEKGRLFEFASP 60

Query: 323 SMQTVLERYVKANRDAD-SPDNNSSTDNVEADR--LAQFTENLKSLQSTVIGNDLERLSL 493
           SM+++L+RY+ + +    S + NSS   +  D+  +      LK L+S ++  DLERLS 
Sbjct: 61  SMESILKRYMDSQKYLGISEEENSSARLLNGDKHWVTTLRNRLKMLRSDLVELDLERLSG 120

Query: 494 RDLIHLEQQIHESLGRIRAKKEELIVDQLEDFKQK 598
            +LI LEQ+++ +LGRIRAKK++LI+ ++E +  K
Sbjct: 121 GNLIRLEQEMNYNLGRIRAKKDQLILREIESYSNK 155


>tr|Q8LPA5|Q8LPA5_PHYPA MADS-box protein PpMADS1 OS=Physcomitrella
           patens subsp. patens GN=PpMADS1 PE=2 SV=1
          Length = 281

 Score =  154 bits (388), Expect = 7e-36
 Identities = 81/173 (46%), Positives = 120/173 (69%), Gaps = 1/173 (0%)
 Frame = +2

Query: 143 MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANT 322
           M R KI+IK+IEN T+RQVTFSKRRGGLLKKAH+L+VLCDAEV +++FSS GK F+FA++
Sbjct: 1   MGRGKIEIKKIENTTSRQVTFSKRRGGLLKKAHELAVLCDAEVALVIFSSTGKHFEFASS 60

Query: 323 -SMQTVLERYVKANRDADSPDNNSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLSLRD 499
            SM+ ++ERY K++  A     N+     E  +L Q  E L+S Q  ++G DL  L + D
Sbjct: 61  GSMRDIIERYRKSSDGAVKRGTNTDLLGREVIKLKQQVERLESSQRHMLGEDLSALKVSD 120

Query: 500 LIHLEQQIHESLGRIRAKKEELIVDQLEDFKQKVAEQRRITNANSSILDKLVD 658
           L+ LEQQ+ +   R+RA+K +LI++++ED ++K   +  +  AN ++  K+ D
Sbjct: 121 LLELEQQLDQGASRVRARKNQLILEEIEDLRRK---EHELMIANEALRKKIAD 170


>tr|A9TMQ2|A9TMQ2_PHYPA MIKCC MADS-domain protein PpMADS1
           OS=Physcomitrella patens subsp. patens GN=PpMADS1 PE=3
           SV=1
          Length = 283

 Score =  154 bits (388), Expect = 7e-36
 Identities = 81/173 (46%), Positives = 120/173 (69%), Gaps = 1/173 (0%)
 Frame = +2

Query: 143 MVRRKIKIKRIENATTRQVTFSKRRGGLLKKAHDLSVLCDAEVGVIVFSSKGKLFQFANT 322
           M R KI+IK+IEN T+RQVTFSKRRGGLLKKAH+L+VLCDAEV +++FSS GK F+FA++
Sbjct: 1   MGRGKIEIKKIENTTSRQVTFSKRRGGLLKKAHELAVLCDAEVALVIFSSTGKHFEFASS 60

Query: 323 -SMQTVLERYVKANRDADSPDNNSSTDNVEADRLAQFTENLKSLQSTVIGNDLERLSLRD 499
            SM+ ++ERY K++  A     N+     E  +L Q  E L+S Q  ++G DL  L + D
Sbjct: 61  GSMRDIIERYRKSSDGAVKRGTNTDLLGREVIKLKQQVERLESSQRHMLGEDLSALKVSD 120

Query: 500 LIHLEQQIHESLGRIRAKKEELIVDQLEDFKQKVAEQRRITNANSSILDKLVD 658
           L+ LEQQ+ +   R+RA+K +LI++++ED ++K   +  +  AN ++  K+ D
Sbjct: 121 LLELEQQLDQGASRVRARKNQLILEEIEDLRRK---EHELMIANEALRKKIAD 170