DK949191
Clone id TST38A01NGRL0005_F07
Library
Length 670
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_F07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
AGATTGATAAAGCTCTTCAGGCCCCTGGACTCCAGAGGTTTGCCAGAGCCAAAGCCTTCT
AAGGAGGCAAAGAAAGATTTCACTCCAAAAGGCAAGTTGCCACGGGGGCCGCCACCTCGG
TCTCTGCGCAACAGGGGGCCTCCACCTCGTTTTTCAGGTCCTGCTCCTCCCAGAGAACGA
GTCTACAAGGACTATGCGCCGCAGTACTCTAGGGAGCGCCATGCTTCAGAAATTATCCCC
CCTAGCTATGCCCTTGTTCCAGATGTGGCCCATGCAGAAGCAGAGTTATTAAGGCAGAGG
CACCTCAGACAAGTCCAAGAAGAGGCTCTTGACAGGAGGGCTTATCTACTCGATCCTGTG
GTTGAAGCTTCAATTGCTCGTAAACGGTACTTGGAGGATGTTTATTTGGCGGAACAGCAA
GCCTTGGCTAAAAGGCCTCTTTTACCTGAAGTTTACAGAGATTTGGAGTACCAAAGAGAG
GCCCCATATCGGGGATATGCAGATGGTTTGCATGCACTCCCTTCCGCAGCTTTGCCTTAT
GATCCGCGGGGCTACTAGTCTTTGACTATGTCTATCTGACACCGACTTTTTATTTGATGG
CTATTTCAATGCTGAAGCTGACTTGGAACTGAAGCAGTTGGCTAGTTTGCCTGTTTACTA
TAGGGCCTTT
■■Homology search results ■■ -
sp_hit_id Q6AW69
Definition sp|Q6AW69|CGNL1_MOUSE Cingulin-like protein 1 OS=Mus musculus
Align length 35
Score (bit) 34.7
E-value 0.45
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949191|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_F07, 5'
(656 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6AW69|CGNL1_MOUSE Cingulin-like protein 1 OS=Mus musculus GN... 35 0.45
sp|Q0VF96|CGNL1_HUMAN Cingulin-like protein 1 OS=Homo sapiens GN... 34 0.77
sp|P71485|EMBA_MYCAV Probable arabinosyltransferase A OS=Mycobac... 33 1.0
sp|O24496|GLO2C_ARATH Hydroxyacylglutathione hydrolase cytoplasm... 31 5.0
sp|A0LV02|CNPD_ACIC1 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 31 5.0
sp|P16846|UL23_HCMVA Tegument protein UL23 OS=Human cytomegalovi... 31 6.5
sp|Q09063|URED_KLEAE Urease accessory protein ureD OS=Klebsiella... 30 8.5
sp|P56206|SYG_THET8 Glycyl-tRNA synthetase OS=Thermus thermophil... 30 8.5
sp|Q9UH65|SWP70_HUMAN Switch-associated protein 70 OS=Homo sapie... 30 8.5
sp|P0C1G6|SWP70_BOVIN Switch-associated protein 70 OS=Bos taurus... 30 8.5

>sp|Q6AW69|CGNL1_MOUSE Cingulin-like protein 1 OS=Mus musculus
GN=Cgnl1 PE=1 SV=2
Length = 1298

Score = 34.7 bits (78), Expect = 0.45
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1

Query: 379 RKRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREA 483
++ L+D AE++AL KR LL + +DLEY+ EA
Sbjct: 1014 KEEELQDYQRAEEEALTKRQLLEQSLKDLEYELEA 1048


>sp|Q0VF96|CGNL1_HUMAN Cingulin-like protein 1 OS=Homo sapiens
GN=CGNL1 PE=1 SV=1
Length = 1302

Score = 33.9 bits (76), Expect = 0.77
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1

Query: 295 QRHLRQVQEEALDRRAYLLDPVVEASIARKRYLEDVYLAEQQALAKRPLLPEVYRDLEYQ 474
QR L++ EA R + E + + L D A+ +AL KR LL + +DLEY+
Sbjct: 990 QRQLKEKTLEAEKSRLTAMKMQDEMRLMEEE-LRDYQRAQDEALTKRQLLEQTLKDLEYE 1048

Query: 475 REA 483
EA
Sbjct: 1049 LEA 1051


>sp|P71485|EMBA_MYCAV Probable arabinosyltransferase A
OS=Mycobacterium avium GN=embA PE=3 SV=1
Length = 1108

Score = 33.5 bits (75), Expect = 1.0
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Frame = -3

Query: 207 VLRRIVLVDSFSGRSRT*KT--RWRPPVAQRPRWRPPWQLAFWSEIFL-------CLLRR 55
VL IV + RSR T WR P+A R+RP LA W + L +L
Sbjct: 213 VLTAIVALAVLDRRSRGGGTLINWRSPIAWLSRYRPGTHLANWRRVGLATWIADAAVLAT 272

Query: 54 LWLWQTSGVQGPEELY 7
L LW G ++ Y
Sbjct: 273 LLLWHVVGATSSDDGY 288


>sp|O24496|GLO2C_ARATH Hydroxyacylglutathione hydrolase cytoplasmic
OS=Arabidopsis thaliana GN=GLX2-2 PE=1 SV=2
Length = 258

Score = 31.2 bits (69), Expect = 5.0
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -2

Query: 466 PNLCKLQVKEAF*PRLAVPPNKHPPSTVYEQLKLQPQDRVDKPSCQEPL 320
PN K+Q K A+ + PST+ E+L+ P RVDKP QE L
Sbjct: 189 PNNGKIQQKLAWARQQRQADLPTIPSTLEEELETNPFMRVDKPEIQEKL 237


>sp|A0LV02|CNPD_ACIC1 2',3'-cyclic-nucleotide 2'-phosphodiesterase
OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B)
GN=Acel_1490 PE=3 SV=1
Length = 491

Score = 31.2 bits (69), Expect = 5.0
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +1

Query: 223 ASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIARKRYLEDV 402
A + PS PD A AEAE+ R + +E+ L R LD E AR+R L ++
Sbjct: 34 AGNVRQPSGMSGPDAAAAEAEIREARSELERREQRLAEREARLDAEHERLAARERQLAEL 93


>sp|P16846|UL23_HCMVA Tegument protein UL23 OS=Human cytomegalovirus
(strain AD169) GN=UL23 PE=3 SV=2
Length = 284

Score = 30.8 bits (68), Expect = 6.5
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3

Query: 147 RWRPPVAQRPRWRPPWQLAF-WSEIFLCLLRRLW 49
RWRPP RP W+P ++A W + ++RR W
Sbjct: 14 RWRPPKTSRP-WKPGQRVALVWPKDRCLVIRRRW 46


>sp|Q09063|URED_KLEAE Urease accessory protein ureD OS=Klebsiella
aerogenes GN=ureD PE=1 SV=1
Length = 270

Score = 30.4 bits (67), Expect = 8.5
Identities = 25/85 (29%), Positives = 36/85 (42%)
Frame = +2

Query: 395 RMFIWRNSKPWLKGLFYLKFTEIWSTKERPHIGDMQMVCMHSLPQLCLMIRGATSL*LCL 574
R+ +W +++P L +L+ E+ S ERP +G + LC
Sbjct: 163 RLEVWVDNEPLLVERLHLQEGELSSIAERPWVGTL----------------------LCY 200

Query: 575 SDTDFLFDGYFNAEADLELKQLASL 649
TD L DG +A A L L ASL
Sbjct: 201 PATDALLDGVRDALAPLGLYAGASL 225


>sp|P56206|SYG_THET8 Glycyl-tRNA synthetase OS=Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579) GN=glyQS PE=1 SV=3
Length = 506

Score = 30.4 bits (67), Expect = 8.5
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = +1

Query: 340 AYLLDPVVEASIARKRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYADGLHAL 519
A DP+V+ I +KRY D L EQ +L +YR +E + E LHAL
Sbjct: 82 ATFADPMVDNRITKKRYRLDHLLKEQ----PEEVLKRLYRAMEVEEE--------NLHAL 129

Query: 520 PSAALPYDPRGY*SLT 567
A + R ++T
Sbjct: 130 VQAMMQAPERAGGAMT 145


>sp|Q9UH65|SWP70_HUMAN Switch-associated protein 70 OS=Homo sapiens
GN=SWAP70 PE=1 SV=1
Length = 585

Score = 30.4 bits (67), Expect = 8.5
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1

Query: 268 AHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIARKRYLEDVYLAEQQAL 426
A EL R++ +RQ EE + +++ L+ ++ R R LED+YL Q+AL
Sbjct: 385 ARFSTELEREKLIRQQMEEQVAQKSSELEQYLQ----RVRELEDMYLKLQEAL 433


>sp|P0C1G6|SWP70_BOVIN Switch-associated protein 70 OS=Bos taurus
GN=SWAP70 PE=1 SV=1
Length = 585

Score = 30.4 bits (67), Expect = 8.5
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1

Query: 268 AHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIARKRYLEDVYLAEQQAL 426
A EL R++ +RQ EE + +++ L+ ++ R R LED+YL Q+AL
Sbjct: 385 ARFSTELEREKLIRQQMEEQVAQKSSELEQYLQ----RVRELEDMYLKLQEAL 433


tr_hit_id A9AVC2
Definition tr|A9AVC2|A9AVC2_HERA2 Putative uncharacterized protein OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)
Align length 142
Score (bit) 38.1
E-value 0.48
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949191|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_F07, 5'
(656 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9AVC2|A9AVC2_HERA2 Putative uncharacterized protein OS=Herpe... 38 0.48
tr|B6SV62|B6SV62_MAIZE Rho GTPase activator OS=Zea mays PE=2 SV=1 37 0.82
tr|B8Q897|B8Q897_ORYSI SKIP interacting protein 11 (Fragment) OS... 37 1.1
tr|B8B5I6|B8B5I6_ORYSI Putative uncharacterized protein OS=Oryza... 37 1.1
tr|Q69RJ1|Q69RJ1_ORYSJ Pleckstrin homology (PH) domain-containin... 37 1.4
tr|Q5QLP4|Q5QLP4_ORYSJ Pleckstrin homology (PH) domain-containin... 37 1.4
tr|Q0D3Z0|Q0D3Z0_ORYSJ Os07g0658300 protein OS=Oryza sativa subs... 37 1.4
tr|A3BN12|A3BN12_ORYSJ Putative uncharacterized protein OS=Oryza... 37 1.4
tr|B0DEY5|B0DEY5_LACBS Predicted protein OS=Laccaria bicolor (st... 37 1.4
tr|A8U9P8|A8U9P8_9LACT Hydrolase, haloacid dehalogenase-like fam... 36 1.8
tr|B6KNK1|B6KNK1_TOXGO Putative uncharacterized protein OS=Toxop... 35 4.0
tr|B2RY19|B2RY19_MOUSE Cgnl1 protein OS=Mus musculus GN=Cgnl1 PE... 35 5.3
tr|B2RSU6|B2RSU6_MOUSE Cingulin-like 1 OS=Mus musculus GN=Cgnl1 ... 35 5.3
tr|Q3SKK1|Q3SKK1_THIDA Nitric oxide reductase activase protein O... 35 5.3
tr|B0DHU1|B0DHU1_LACBS Predicted protein OS=Laccaria bicolor (st... 34 9.0
tr|A3LWR0|A3LWR0_PICST Predicted protein OS=Pichia stipitis GN=P... 34 9.0

>tr|A9AVC2|A9AVC2_HERA2 Putative uncharacterized protein
OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM
785) GN=Haur_1970 PE=3 SV=1
Length = 734

Score = 38.1 bits (87), Expect = 0.48
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
Frame = +1

Query: 181 VYKDYAPQYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEA---LDRRAYLL 351
++++ A Q +++ + EIIP Y V + LL+Q HLRQV +EA + + ++L
Sbjct: 38 LWQNVAEQDIQQKGSREIIPVVYRTVA----LDLNLLQQ-HLRQVPQEAQTKVQKSGFML 92

Query: 352 D-PVVEASIARKRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYADGLHALPSA 528
D P+ + + R +E +A + A PE+ L + P SA
Sbjct: 93 DLPLPDGQFGKFRVVESPIMAPELAAK----FPEIRTFLAQSVDQP----------ATSA 138

Query: 529 ALPYDPRGY*SLTMSI*HRLFI 594
L PRG+ + +S R+FI
Sbjct: 139 RLDITPRGFHGMILSESGRIFI 160


>tr|B6SV62|B6SV62_MAIZE Rho GTPase activator OS=Zea mays PE=2 SV=1
Length = 871

Score = 37.4 bits (85), Expect = 0.82
Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Frame = +1

Query: 202 QYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIAR 381
Q S ER + AL DV+ + +L +R LR E L + +
Sbjct: 609 QASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSGQFSSARSMDVKT 668

Query: 382 KRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYADG---LHALP 522
K LE++ LAE + + E++ L QR+ Y D H LP
Sbjct: 669 KAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSVVDANDRHHRLP 718


>tr|B8Q897|B8Q897_ORYSI SKIP interacting protein 11 (Fragment)
OS=Oryza sativa subsp. indica GN=SIP11 PE=2 SV=1
Length = 812

Score = 37.0 bits (84), Expect = 1.1
Identities = 27/101 (26%), Positives = 41/101 (40%)
Frame = +1

Query: 202 QYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIAR 381
Q S ER + AL DV+ + +L +R LR E L + +
Sbjct: 553 QASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSAQISSSRSMDSKT 612

Query: 382 KRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYAD 504
K LE++ LAE + + E++ L QR+ Y AD
Sbjct: 613 KAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSLAD 653


>tr|B8B5I6|B8B5I6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_27182 PE=4 SV=1
Length = 870

Score = 37.0 bits (84), Expect = 1.1
Identities = 27/101 (26%), Positives = 41/101 (40%)
Frame = +1

Query: 202 QYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIAR 381
Q S ER + AL DV+ + +L +R LR E L + +
Sbjct: 611 QASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSAQISSSRSMDSKT 670

Query: 382 KRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYAD 504
K LE++ LAE + + E++ L QR+ Y AD
Sbjct: 671 KAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSLAD 711


>tr|Q69RJ1|Q69RJ1_ORYSJ Pleckstrin homology (PH) domain-containing
protein-like OS=Oryza sativa subsp. japonica
GN=P0047B07.132-1 PE=4 SV=1
Length = 872

Score = 36.6 bits (83), Expect = 1.4
Identities = 27/101 (26%), Positives = 41/101 (40%)
Frame = +1

Query: 202 QYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIAR 381
Q S ER + AL DV+ + +L +R LR E L + +
Sbjct: 612 QASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSAHISSSRSMDSKT 671

Query: 382 KRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYAD 504
K LE++ LAE + + E++ L QR+ Y AD
Sbjct: 672 KAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSLAD 712


>tr|Q5QLP4|Q5QLP4_ORYSJ Pleckstrin homology (PH) domain-containing
protein-like OS=Oryza sativa subsp. japonica
GN=OJ1477_F01.111-2 PE=4 SV=1
Length = 751

Score = 36.6 bits (83), Expect = 1.4
Identities = 27/101 (26%), Positives = 41/101 (40%)
Frame = +1

Query: 202 QYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIAR 381
Q S ER + AL DV+ + +L +R LR E L + +
Sbjct: 612 QASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSAHISSSRSMDSKT 671

Query: 382 KRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYAD 504
K LE++ LAE + + E++ L QR+ Y AD
Sbjct: 672 KAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSLAD 712


>tr|Q0D3Z0|Q0D3Z0_ORYSJ Os07g0658300 protein OS=Oryza sativa subsp.
japonica GN=Os07g0658300 PE=2 SV=1
Length = 871

Score = 36.6 bits (83), Expect = 1.4
Identities = 27/101 (26%), Positives = 41/101 (40%)
Frame = +1

Query: 202 QYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIAR 381
Q S ER + AL DV+ + +L +R LR E L + +
Sbjct: 612 QASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSAHISSSRSMDSKT 671

Query: 382 KRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYAD 504
K LE++ LAE + + E++ L QR+ Y AD
Sbjct: 672 KAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSLAD 712


>tr|A3BN12|A3BN12_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_024434 PE=4 SV=1
Length = 875

Score = 36.6 bits (83), Expect = 1.4
Identities = 27/101 (26%), Positives = 41/101 (40%)
Frame = +1

Query: 202 QYSRERHASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIAR 381
Q S ER + AL DV+ + +L +R LR E L + +
Sbjct: 616 QASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSAHISSSRSMDSKT 675

Query: 382 KRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREAPYRGYAD 504
K LE++ LAE + + E++ L QR+ Y AD
Sbjct: 676 KAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSLAD 716


>tr|B0DEY5|B0DEY5_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_294592 PE=4 SV=1
Length = 549

Score = 36.6 bits (83), Expect = 1.4
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +1

Query: 262 DVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIARKRYLEDVYLAEQQALAKRPL 441
+ A EL RQ H +++EE +RRA L V +RY E++ +QQ A +
Sbjct: 337 EAQRAREELERQAHEARIREEEANRRAAL--EVQAREEEARRYAEEMARMQQQVEAHQAR 394

Query: 442 LPEVYRDLEYQ 474
P ++RD+ Q
Sbjct: 395 EPRLWRDVSMQ 405


>tr|A8U9P8|A8U9P8_9LACT Hydrolase, haloacid dehalogenase-like family
protein OS=Carnobacterium sp. AT7 GN=CAT7_07113 PE=4
SV=1
Length = 269

Score = 36.2 bits (82), Expect = 1.8
Identities = 26/86 (30%), Positives = 39/86 (45%)
Frame = +1

Query: 289 LRQRHLRQVQEEALDRRAYLLDPVVEASIARKRYLEDVYLAEQQALAKRPLLPEVYRDLE 468
L + +LR+V + + L+ + K+ L V + E AL+K +P + DLE
Sbjct: 53 LEELNLREVGDYGITYNGGLVQRTDTGEVLSKKTLTKVEIEEIFALSKEINVPCNFIDLE 112

Query: 469 YQREAPYRGYADGLHALPSAALPYDP 546
E PY D L+ ALPY P
Sbjct: 113 KIYEPPYPEGRDSLYPTVMRALPYVP 138