| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949198|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_F14, 5'
(756 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 154 7e-37
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 152 3e-36
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 146 1e-34
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 144 5e-34
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor... 136 1e-31
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 135 2e-31
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 134 7e-31
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 128 4e-29
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 127 7e-29
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=... 117 5e-26
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S... 108 3e-23
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 105 2e-22
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 99 3e-20
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=S... 89 3e-17
sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabi... 86 3e-16
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus ... 85 4e-16
sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-ind... 85 5e-16
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra... 85 5e-16
sp|Q9P3U1|YKX5_SCHPO Uncharacterized RNA-binding protein C328.05... 84 1e-15
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh... 84 1e-15
sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=S... 84 1e-15
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi... 81 7e-15
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote... 79 2e-14
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus... 79 3e-14
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong... 79 3e-14
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus ... 79 3e-14
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo... 79 3e-14
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cric... 79 3e-14
sp|O74400|YOCE_SCHPO Uncharacterized RNA-binding protein C4F6.14... 75 3e-13
sp|P39697|RT19_ARATH 40S ribosomal protein S19, mitochondrial OS... 75 3e-13
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic
OS=Spinacia oleracea PE=1 SV=1
Length = 233
Score = 154 bits (388), Expect = 7e-37
Identities = 81/139 (58%), Positives = 99/139 (71%)
Frame = +1
Query: 4 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNK 183
RSRGFGFVTMS+VE+ A+E L+G D GR L VN + RAPR D S +
Sbjct: 94 RSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVN---KAAPRGSPERAPRGDFEPSCR 150
Query: 184 LFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKM 363
++VGNL W VD L LFSEHGKV+ ARVV+DRETGRSRGFGFVTMS+E+EVN A+ +
Sbjct: 151 VYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAAL 210
Query: 364 DGAAIEGRNLRVNMAGERP 420
DG ++GR +RVN+A ERP
Sbjct: 211 DGQTLDGRAVRVNVAEERP 229
Score = 75.1 bits (183), Expect = 4e-13
Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Frame = +1
Query: 181 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 360
KLFVGNL + VD L +F G V A V+ +RET RSRGFGFVTMST E +A+
Sbjct: 56 KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 115
Query: 361 MDGAAIEGRNLRVNMAGERPS----SRSDF 438
++G ++GR L VN A R S R DF
Sbjct: 116 LNGYDMDGRQLTVNKAAPRGSPERAPRGDF 145
Score = 48.5 bits (114), Expect = 4e-05
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVN 111
GRSRGFGFVTMSS + N AI LDG GR +RVN
Sbjct: 187 GRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVN 223
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic
OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 152 bits (383), Expect = 3e-36
Identities = 83/142 (58%), Positives = 104/142 (73%)
Frame = +1
Query: 4 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNK 183
+SRGFGFVTMSSV++ TA+EK + D GR L VN RG P RAPR+ + + +
Sbjct: 189 QSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN-KAAPRGSRPE-RAPRVYEP-AFR 245
Query: 184 LFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKM 363
++VGNL W VD+G L LFSEHGKV+EARVV DRETGRSRGFGFVTMS E+N+A++ +
Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305
Query: 364 DGAAIEGRNLRVNMAGERPSSR 429
DG +EGR +RVN+A ERP R
Sbjct: 306 DGQNLEGRAIRVNVAEERPPRR 327
Score = 72.0 bits (175), Expect = 3e-12
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Frame = +1
Query: 13 GFGFVTMSSVEDCNTAIEKLDGADYAGRTLR--VNFPNRNRGD----APTPRAPRMDQNN 174
G G V + E+ + + +G + G V+ + + GD A + RA + +
Sbjct: 89 GEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSE 148
Query: 175 SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQAL 354
KLFVGNLA+ V+ L LF + G V A V+ +RET +SRGFGFVTMS+ E A+
Sbjct: 149 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 208
Query: 355 NKMDGAAIEGRNLRVNMAGERPS 423
K + + GR L VN A R S
Sbjct: 209 EKFNRYDLNGRLLTVNKAAPRGS 231
Score = 52.0 bits (123), Expect = 4e-06
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVN 111
GRSRGFGFVTMS V++ N AI LDG + GR +RVN
Sbjct: 282 GRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVN 318
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 315
Score = 146 bits (369), Expect = 1e-34
Identities = 79/145 (54%), Positives = 105/145 (72%)
Frame = +1
Query: 4 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNK 183
+SRGFGFVTMS+VE+ A+E + D GR L VN R RG+ P R PR + S +
Sbjct: 175 QSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAAR-RGERPE-RPPRTFEQ-SYR 231
Query: 184 LFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKM 363
++VGN+ WG+DD L LFSEHGKV+ ARVV DRETGRSRGFGFVTM++EAE++ A+ +
Sbjct: 232 IYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANL 291
Query: 364 DGAAIEGRNLRVNMAGERPSSRSDF 438
DG +++GR +RVN+A +R S R+ F
Sbjct: 292 DGQSLDGRTIRVNVAEDR-SRRNTF 315
Score = 68.9 bits (167), Expect = 3e-11
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = +1
Query: 181 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 360
KLFVGNL + VD L LF + G V A V+ +R+T +SRGFGFVTMST E +A+
Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEM 196
Query: 361 MDGAAIEGRNLRVNMA---GERP 420
+ + GR L VN A GERP
Sbjct: 197 YNRYDVNGRLLTVNKAARRGERP 219
Score = 48.1 bits (113), Expect = 5e-05
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVN 111
GRSRGFGFVTM+S + + AI LDG GRT+RVN
Sbjct: 268 GRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVN 304
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 276
Score = 144 bits (363), Expect = 5e-34
Identities = 77/139 (55%), Positives = 99/139 (71%)
Frame = +1
Query: 4 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNK 183
RSRGFGFVTMS+VE+ + A+E D GR L VN RG P RAPR Q + +
Sbjct: 136 RSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVN-KAAPRGSRPE-RAPRTFQP-TYR 192
Query: 184 LFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKM 363
++VGN+ W +DD L +FSEHGKV+ ARVV DRE+GRSRGFGFVTMS+EAE+++A+ +
Sbjct: 193 IYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANL 252
Query: 364 DGAAIEGRNLRVNMAGERP 420
DG ++GR +RVN A ERP
Sbjct: 253 DGQTLDGRTIRVNAAEERP 271
Score = 72.0 bits (175), Expect = 3e-12
Identities = 55/136 (40%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Frame = +1
Query: 22 FVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPN--RNRGDAPTPRAPRMDQNNSNKLFVG 195
FV++ S ED NT + LD + G +FP+ G+ + P D KLFVG
Sbjct: 55 FVSVLS-EDDNTLV--LDDQEQGG-----DFPSFVGEAGETEEYQEPSEDA----KLFVG 102
Query: 196 NLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKMDGAA 375
NL + +D L LF + G V A V+ +RET RSRGFGFVTMST E ++A+
Sbjct: 103 NLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYD 162
Query: 376 IEGRNLRVNMAGERPS 423
+ GR L VN A R S
Sbjct: 163 LNGRLLTVNKAAPRGS 178
Score = 49.3 bits (116), Expect = 2e-05
Identities = 27/46 (58%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNF----PNRN 126
GRSRGFGFVTMSS + + AI LDG GRT+RVN P RN
Sbjct: 229 GRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERPRRN 274
>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
SV=1
Length = 289
Score = 136 bits (343), Expect = 1e-31
Identities = 74/159 (46%), Positives = 98/159 (61%), Gaps = 16/159 (10%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNF----PNRNRGDAPTPRAP---- 156
GRSRGFGFVTMSSV + A ++ +G + GR LRVN P R G + PR+
Sbjct: 129 GRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSS 188
Query: 157 --------RMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 312
+ N+++VGNL+WGVDD L LFSE GKV+EARV+ DR++GRS+GFG
Sbjct: 189 GSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFG 248
Query: 313 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 429
FVT + EV A+ +DGA ++GR +RV+ A RP R
Sbjct: 249 FVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRR 287
Score = 82.4 bits (202), Expect = 2e-15
Identities = 49/99 (49%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +1
Query: 151 APRMDQNNSN--KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTM 324
AP +Q+ S KLFVGNL + VD L LF G V V+ D+ TGRSRGFGFVTM
Sbjct: 80 APPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTM 139
Query: 325 STEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSDFF 441
S+ +EV A + +G ++GR LRVN AG P R D F
Sbjct: 140 SSVSEVEAAAQQFNGYELDGRPLRVN-AGPPPPKREDGF 177
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
OS=Nicotiana sylvestris PE=2 SV=1
Length = 273
Score = 135 bits (341), Expect = 2e-31
Identities = 74/147 (50%), Positives = 97/147 (65%), Gaps = 4/147 (2%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNF--PNRNRGDAPTPRAPRMDQN- 171
GRSRGFGFVTMSS E+ A ++ +G + GR LRVN P R ++ R +
Sbjct: 125 GRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSF 184
Query: 172 -NSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQ 348
+SN+++VGNLAWGVD L LFSE GKV++A+VV DR++GRSRGFGFVT S+ EVN
Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244
Query: 349 ALNKMDGAAIEGRNLRVNMAGERPSSR 429
A+ +DG + GR +RV+ A RP R
Sbjct: 245 AIESLDGVDLNGRAIRVSPAEARPPRR 271
Score = 76.3 bits (186), Expect = 2e-13
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +1
Query: 181 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 360
K+FVGNL + D L +LF G V V+ D+ TGRSRGFGFVTMS++ EV A +
Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 361 MDGAAIEGRNLRVNMAGERPSSRSD 435
+G ++GR LRVN +G P R +
Sbjct: 148 FNGYELDGRALRVN-SGPPPEKREN 171
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana plumbaginifolia PE=2 SV=1
Length = 279
Score = 134 bits (336), Expect = 7e-31
Identities = 75/158 (47%), Positives = 95/158 (60%), Gaps = 15/158 (9%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNS- 177
GRSRGFGFVTMSS E+ A ++ +G + GR LRVN G P R + NS
Sbjct: 125 GRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVN-----SGPPPEKRENSSFRENSS 179
Query: 178 --------------NKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGF 315
N+++VGNLAWGVD L LFSE GKV++A+VV DR++GRSRGFGF
Sbjct: 180 FRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGF 239
Query: 316 VTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 429
VT S+ EVN A+ +DG + GR +RV+ A RP R
Sbjct: 240 VTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRR 277
Score = 76.3 bits (186), Expect = 2e-13
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +1
Query: 181 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 360
K+FVGNL + D L +LF G V V+ D+ TGRSRGFGFVTMS++ EV A +
Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 361 MDGAAIEGRNLRVNMAGERPSSRSD 435
+G ++GR LRVN +G P R +
Sbjct: 148 FNGYELDGRALRVN-SGPPPEKREN 171
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
OS=Nicotiana sylvestris PE=2 SV=1
Length = 291
Score = 128 bits (321), Expect = 4e-29
Identities = 71/168 (42%), Positives = 100/168 (59%), Gaps = 28/168 (16%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRM------ 162
GRSRGFGFVTMS+ E+ A ++ +G + GR +RVN G AP R
Sbjct: 125 GRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-----AGPAPAKRENSSFGGGRG 179
Query: 163 ----------------------DQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVV 276
++SN+++VGNL+WGVDD L +LFSE G V++A+VV
Sbjct: 180 GNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVV 239
Query: 277 NDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 420
DR++GRSRGFGFVT S+ EVN A++ ++G ++GR++RV+ A ERP
Sbjct: 240 YDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEERP 287
Score = 80.9 bits (198), Expect = 7e-15
Identities = 47/101 (46%), Positives = 59/101 (58%)
Frame = +1
Query: 133 DAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 312
D PR ++ KLFVGNL + VD L LF G V V+ D+ TGRSRGFG
Sbjct: 74 DVEVAEQPRFSEDL--KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFG 131
Query: 313 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 435
FVTMST+ EV A + +G I+GR +RVN AG P+ R +
Sbjct: 132 FVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGPAPAKREN 171
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana plumbaginifolia PE=2 SV=1
Length = 292
Score = 127 bits (319), Expect = 7e-29
Identities = 71/168 (42%), Positives = 100/168 (59%), Gaps = 28/168 (16%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRM------ 162
GRSRGFGFVTMS+ E+ A ++ +G + GR +RVN G AP R
Sbjct: 126 GRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-----AGPAPAKRENSSFGGGRG 180
Query: 163 ----------------------DQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVV 276
++SN+++VGNL+WGVDD L +LFSE G V++A+VV
Sbjct: 181 GNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVV 240
Query: 277 NDRETGRSRGFGFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 420
DR++GRSRGFGFVT S+ EVN A++ ++G ++GR++RV+ A ERP
Sbjct: 241 YDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEERP 288
Score = 79.0 bits (193), Expect = 3e-14
Identities = 46/101 (45%), Positives = 59/101 (58%)
Frame = +1
Query: 133 DAPTPRAPRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFG 312
D PR ++ KLFVGNL + VD L LF G V V+ D+ +GRSRGFG
Sbjct: 75 DVEVAEQPRFSEDL--KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFG 132
Query: 313 FVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 435
FVTMST+ EV A + +G I+GR +RVN AG P+ R +
Sbjct: 133 FVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGPAPAKREN 172
>sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic
OS=Nicotiana sylvestris PE=1 SV=1
Length = 324
Score = 117 bits (294), Expect = 5e-26
Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 6/144 (4%)
Frame = +1
Query: 4 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQ----- 168
RSRGF FVTM SVE+ AI DG+ GRT++VNFP RG + ++
Sbjct: 153 RSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGF 212
Query: 169 -NNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVN 345
++ +KL+V NL+W + L D F++ + A+V+ DR +GRSRGFGF+T S+ +N
Sbjct: 213 VDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMN 272
Query: 346 QALNKMDGAAIEGRNLRVNMAGER 417
AL+ M+ +EGR LR+N+AG++
Sbjct: 273 SALDTMNEVELEGRPLRLNVAGQK 296
Score = 67.8 bits (164), Expect = 6e-11
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +1
Query: 181 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 360
+L+VGNL + + L ++F+E G V +V DR T RSRGF FVTM + E +A+
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174
Query: 361 MDGAAIEGRNLRVN 402
DG+ + GR ++VN
Sbjct: 175 FDGSQVGGRTVKVN 188
Score = 47.8 bits (112), Expect = 7e-05
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTP---RAPRMDQN 171
GRSRGFGF+T SS E N+A++ ++ + GR LR+N + + P +P D +
Sbjct: 255 GRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQKAPVSSPPVVETSPENDSD 314
Query: 172 NSNKL 186
NS L
Sbjct: 315 NSELL 319
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949198|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_F14, 5'
(756 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomit... 163 1e-38
tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella paten... 158 3e-37
tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment) OS=Physcomit... 154 8e-36
tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea... 152 2e-35
tr|Q39209|Q39209_ARATH RNA binding protein (Fragment) OS=Arabido... 152 3e-35
tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella paten... 151 5e-35
tr|Q94EH5|Q94EH5_ARATH AT4g24770/F22K18_30 OS=Arabidopsis thalia... 150 7e-35
tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein (Fra... 150 7e-35
tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subs... 150 9e-35
tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza... 150 9e-35
tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome ... 149 2e-34
tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 149 3e-34
tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 148 4e-34
tr|B0M184|B0M184_MESCR Chloroplast RNA binding protein OS=Mesemb... 147 6e-34
tr|B4G1V3|B4G1V3_MAIZE Putative uncharacterized protein OS=Zea m... 147 1e-33
tr|A7PT43|A7PT43_VITVI Chromosome chr8 scaffold_29, whole genome... 146 1e-33
tr|Q40270|Q40270_MESCR RNA-binding protein OS=Mesembryanthemum c... 146 2e-33
tr|O23798|O23798_WHEAT Ps16 protein OS=Triticum aestivum PE=2 SV=1 144 8e-33
tr|Q0Q6S3|Q0Q6S3_LILLO GRSF OS=Lilium longiflorum GN=GRSF PE=2 SV=1 143 1e-32
tr|O81987|O81987_HORVU Cp31AHv protein OS=Hordeum vulgare PE=2 SV=1 142 2e-32
tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativ... 142 2e-32
tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subs... 142 2e-32
tr|Q8SMH8|Q8SMH8_PERAE RNA-binding protein OS=Persea americana G... 142 3e-32
tr|Q650W6|Q650W6_ORYSJ Os09g0565200 protein OS=Oryza sativa subs... 142 3e-32
tr|B8BEL6|B8BEL6_ORYSI Putative uncharacterized protein OS=Oryza... 142 3e-32
tr|A6N0D0|A6N0D0_ORYSI Chloroplast 28 kDa ribonucleoprotein (Fra... 142 3e-32
tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza... 142 3e-32
tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subs... 141 4e-32
tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza... 141 4e-32
tr|Q41834|Q41834_MAIZE Putative uncharacterized protein OS=Zea m... 140 7e-32
>tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_47163 PE=4 SV=1
Length = 192
Score = 163 bits (413), Expect = 1e-38
Identities = 83/153 (54%), Positives = 111/153 (72%), Gaps = 10/153 (6%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPN---------RNRGDAPTPRA 153
GRSRGF FVTM++ ED IE+LDG D GR L+V+FP R G + RA
Sbjct: 38 GRSRGFAFVTMATQEDAENVIERLDGHDVGGRPLKVSFPQSKQNRPSFPRGEGYQRSERA 97
Query: 154 PR-MDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMST 330
PR +++ NK+FVGNL+WGVD+G L +LFS++GKV++ARVV DRE+GRSRGFGFVT S
Sbjct: 98 PRPAARDDPNKVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSD 157
Query: 331 EAEVNQALNKMDGAAIEGRNLRVNMAGERPSSR 429
+EV+ A++ +DGA +GR LRVN+AG +P+S+
Sbjct: 158 VSEVDAAIDSLDGAEFDGRELRVNLAGNKPASK 190
Score = 68.9 bits (167), Expect = 3e-10
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +1
Query: 181 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 360
KL++GNL W D L + E G V V+ D+E+GRSRGF FVTM+T+ + + +
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60
Query: 361 MDGAAIEGRNLRVN 402
+DG + GR L+V+
Sbjct: 61 LDGHDVGGRPLKVS 74
>tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_134646 PE=4 SV=1
Length = 224
Score = 158 bits (400), Expect = 3e-37
Identities = 75/143 (52%), Positives = 101/143 (70%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSN 180
GRSRGF FVTM++ ED I LDG D GR L+VN+P + D P ++++N
Sbjct: 82 GRSRGFAFVTMATPEDAQAVINALDGTDMGGRPLKVNYPQSQK-DKPRVERSERPRDDAN 140
Query: 181 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 360
KLFVGNL+WG D+ L+ FSE+G V++A+VV DR++GRSRGFGFVTM + A N A+
Sbjct: 141 KLFVGNLSWGCDEAALYSFFSEYGTVVDAKVVFDRDSGRSRGFGFVTMESAAAANAAIEN 200
Query: 361 MDGAAIEGRNLRVNMAGERPSSR 429
+DGA ++GR LRVN+AGE+P +R
Sbjct: 201 LDGAELDGRRLRVNLAGEKPPTR 223
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/91 (40%), Positives = 53/91 (58%)
Frame = +1
Query: 163 DQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEV 342
++ KL+VGNL W D L ++ S+HG V V+ D+ +GRSRGF FVTM+T +
Sbjct: 39 EEQFETKLYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKISGRSRGFAFVTMATPEDA 98
Query: 343 NQALNKMDGAAIEGRNLRVNMAGERPSSRSD 435
+N +DG + GR L+VN P S+ D
Sbjct: 99 QAVINALDGTDMGGRPLKVNY----PQSQKD 125
>tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_34983 PE=4 SV=1
Length = 194
Score = 154 bits (388), Expect = 8e-36
Identities = 78/157 (49%), Positives = 105/157 (66%), Gaps = 17/157 (10%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFP-------------NRNRGDAP 141
GRSRGF FVTMS+ E + I++LDG+D+ GR L+V+FP N RGD
Sbjct: 38 GRSRGFAFVTMSTNEGAQSVIDRLDGSDFGGRPLKVSFPQPRENRDNKPRFGNNERGDRR 97
Query: 142 TPRAPRMDQN----NSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGF 309
+ R PR + N+NK+F+GNL+W D L +FSE+G V++A+VV DR+TG+SRGF
Sbjct: 98 SDRPPRQGSDRVLDNTNKMFIGNLSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKSRGF 157
Query: 310 GFVTMSTEAEVNQALNKMDGAAIEGRNLRVNMAGERP 420
GFVTMS +EV+ A+ +DGA EGR +RV+ AGERP
Sbjct: 158 GFVTMSAASEVSNAVQNLDGAEFEGREMRVSEAGERP 194
Score = 65.1 bits (157), Expect = 5e-09
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +1
Query: 181 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 360
KL+VGNL W D L ++ + V VV D+++GRSRGF FVTMST +++
Sbjct: 1 KLYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDR 60
Query: 361 MDGAAIEGRNLRVNMAGER 417
+DG+ GR L+V+ R
Sbjct: 61 LDGSDFGGRPLKVSFPQPR 79
>tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 299
Score = 152 bits (385), Expect = 2e-35
Identities = 75/148 (50%), Positives = 105/148 (70%), Gaps = 6/148 (4%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRA------PRM 162
GRSRGF FVTM++ D + A+EK +G +Y GRTLRVN D+ PR P
Sbjct: 151 GRSRGFAFVTMATQADADEAVEKFNGYEYQGRTLRVNSGPPPPKDSFAPRGGFRNEKPSG 210
Query: 163 DQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEV 342
+ N++N++FVGNL WG DD L LFS+HGKV+EA+VV DRETGRSRGFGFVT+S+ E+
Sbjct: 211 NYNSANRVFVGNLPWGADDLSLEQLFSDHGKVMEAKVVYDRETGRSRGFGFVTLSSPQEI 270
Query: 343 NQALNKMDGAAIEGRNLRVNMAGERPSS 426
+A++ +DG+ ++GR ++V +A +P+S
Sbjct: 271 EEAISSLDGSDMDGRQIKVTLAETKPAS 298
Score = 85.1 bits (209), Expect = 5e-15
Identities = 40/80 (50%), Positives = 53/80 (66%)
Frame = +1
Query: 181 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 360
K+FVGNL W VD L +LF + G V V+ DR+TGRSRGF FVTM+T+A+ ++A+ K
Sbjct: 114 KVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEK 173
Query: 361 MDGAAIEGRNLRVNMAGERP 420
+G +GR LRVN P
Sbjct: 174 FNGYEYQGRTLRVNSGPPPP 193
>tr|Q39209|Q39209_ARATH RNA binding protein (Fragment)
OS=Arabidopsis thaliana GN=rnp-D PE=2 SV=1
Length = 310
Score = 152 bits (383), Expect = 3e-35
Identities = 83/142 (58%), Positives = 104/142 (73%)
Frame = +1
Query: 4 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNK 183
+SRGFGFVTMSSV++ TA+EK + D GR L VN RG P RAPR+ + + +
Sbjct: 170 QSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN-KAAPRGSRPE-RAPRVYEP-AFR 226
Query: 184 LFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKM 363
++VGNL W VD+G L LFSEHGKV+EARVV DRETGRSRGFGFVTMS E+N+A++ +
Sbjct: 227 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 286
Query: 364 DGAAIEGRNLRVNMAGERPSSR 429
DG +EGR +RVN+A ERP R
Sbjct: 287 DGQNLEGRAIRVNVAEERPPRR 308
Score = 72.0 bits (175), Expect = 4e-11
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Frame = +1
Query: 13 GFGFVTMSSVEDCNTAIEKLDGADYAGRTLR--VNFPNRNRGD----APTPRAPRMDQNN 174
G G V + E+ + + +G + G V+ + + GD A + RA + +
Sbjct: 70 GEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSE 129
Query: 175 SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQAL 354
KLFVGNLA+ V+ L LF + G V A V+ +RET +SRGFGFVTMS+ E A+
Sbjct: 130 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 189
Query: 355 NKMDGAAIEGRNLRVNMAGERPS 423
K + + GR L VN A R S
Sbjct: 190 EKFNRYDLNGRLLTVNKAAPRGS 212
Score = 52.0 bits (123), Expect = 4e-05
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVN 111
GRSRGFGFVTMS V++ N AI LDG + GR +RVN
Sbjct: 263 GRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVN 299
>tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_147462 PE=4 SV=1
Length = 213
Score = 151 bits (381), Expect = 5e-35
Identities = 73/150 (48%), Positives = 98/150 (65%), Gaps = 7/150 (4%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNR-------GDAPTPRAPR 159
GRSRGF FVTM+S +D I LDG+D GR L+VNFP + +A P A R
Sbjct: 61 GRSRGFAFVTMASHDDAQALINALDGSDMGGRALKVNFPQSQKDKPRFEKSEARPPTADR 120
Query: 160 MDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAE 339
+++ NKLFVGN+ WG D+ + LFS +G V++A++V DR++GRSRGFGFVTM +
Sbjct: 121 RPRDDPNKLFVGNIPWGCDEAAMTSLFSPYGSVVDAKIVYDRDSGRSRGFGFVTMEKVGD 180
Query: 340 VNQALNKMDGAAIEGRNLRVNMAGERPSSR 429
A+ +DG ++GR LRVN AGE+P SR
Sbjct: 181 AQTAMENLDGTELDGRELRVNFAGEKPPSR 210
Score = 74.7 bits (182), Expect = 6e-12
Identities = 37/95 (38%), Positives = 57/95 (60%)
Frame = +1
Query: 151 APRMDQNNSNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMST 330
AP ++ +K++VGNL W D L ++ S+HG V V+ D+ +GRSRGF FVTM++
Sbjct: 14 APVAEEQLGSKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMAS 73
Query: 331 EAEVNQALNKMDGAAIEGRNLRVNMAGERPSSRSD 435
+ +N +DG+ + GR L+VN P S+ D
Sbjct: 74 HDDAQALINALDGSDMGGRALKVNF----PQSQKD 104
>tr|Q94EH5|Q94EH5_ARATH AT4g24770/F22K18_30 OS=Arabidopsis thaliana
PE=2 SV=1
Length = 329
Score = 150 bits (380), Expect = 7e-35
Identities = 82/139 (58%), Positives = 103/139 (74%)
Frame = +1
Query: 4 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNNSNK 183
+SRGFGFVTMSSV++ TA+EK + D GR L VN RG P RAPR+ + + +
Sbjct: 189 QSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN-KAAPRGSRPE-RAPRVYEP-AFR 245
Query: 184 LFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNKM 363
++VGNL W VD+G L LFSEHGKV+EARVV DRETGRSRGFGFVTMS E+N+A++ +
Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305
Query: 364 DGAAIEGRNLRVNMAGERP 420
DG +EGR +RVN+A ERP
Sbjct: 306 DGQNLEGRAIRVNVAEERP 324
Score = 72.0 bits (175), Expect = 4e-11
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Frame = +1
Query: 13 GFGFVTMSSVEDCNTAIEKLDGADYAGRTLR--VNFPNRNRGD----APTPRAPRMDQNN 174
G G V + E+ + + +G + G V+ + + GD A + RA + +
Sbjct: 89 GEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSE 148
Query: 175 SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQAL 354
KLFVGNLA+ V+ L LF + G V A V+ +RET +SRGFGFVTMS+ E A+
Sbjct: 149 EAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAV 208
Query: 355 NKMDGAAIEGRNLRVNMAGERPS 423
K + + GR L VN A R S
Sbjct: 209 EKFNRYDLNGRLLTVNKAAPRGS 231
Score = 52.0 bits (123), Expect = 4e-05
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVN 111
GRSRGFGFVTMS V++ N AI LDG + GR +RVN
Sbjct: 282 GRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVN 318
>tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein
(Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1
Length = 205
Score = 150 bits (380), Expect = 7e-35
Identities = 77/143 (53%), Positives = 100/143 (69%), Gaps = 3/143 (2%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNN-- 174
GRSRGFGFVTMS+ E+ AIE+ +G + GR LRVN D PR+PR +N
Sbjct: 59 GRSRGFGFVTMSTAEEAGAAIEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFD 118
Query: 175 -SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQA 351
SNKL+VGNLAWGVD+ L +LFSE G VL+A+V+ DRE+GRSRGFGFVT + EVN A
Sbjct: 119 SSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNA 178
Query: 352 LNKMDGAAIEGRNLRVNMAGERP 420
++ +DG ++GR +RV +A +P
Sbjct: 179 ISNLDGVDLDGRQIRVTVAESKP 201
Score = 81.3 bits (199), Expect = 7e-14
Identities = 44/86 (51%), Positives = 52/86 (60%)
Frame = +1
Query: 181 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 360
K+FVGNL + VD L LF + G V VV DR+TGRSRGFGFVTMST E A+ +
Sbjct: 22 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQ 81
Query: 361 MDGAAIEGRNLRVNMAGERPSSRSDF 438
+G +GR LRVN P R DF
Sbjct: 82 FNGYTFQGRPLRVNSG--PPPPRDDF 105
>tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subsp.
japonica GN=P0519E12.113 PE=4 SV=1
Length = 264
Score = 150 bits (379), Expect = 9e-35
Identities = 76/143 (53%), Positives = 100/143 (69%), Gaps = 3/143 (2%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNN-- 174
GRSRGFGFVTMS+ E+ A+E+ +G + GR LRVN D PR+PR +N
Sbjct: 118 GRSRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFD 177
Query: 175 -SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQA 351
SNKL+VGNLAWGVD+ L +LFSE G VL+A+V+ DRE+GRSRGFGFVT + EVN A
Sbjct: 178 SSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNA 237
Query: 352 LNKMDGAAIEGRNLRVNMAGERP 420
++ +DG ++GR +RV +A +P
Sbjct: 238 ISNLDGVDLDGRQIRVTVAESKP 260
Score = 80.9 bits (198), Expect = 9e-14
Identities = 44/86 (51%), Positives = 52/86 (60%)
Frame = +1
Query: 181 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 360
K+FVGNL + VD L LF + G V VV DR+TGRSRGFGFVTMST E A+ +
Sbjct: 81 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 140
Query: 361 MDGAAIEGRNLRVNMAGERPSSRSDF 438
+G +GR LRVN P R DF
Sbjct: 141 FNGYTFQGRPLRVNSG--PPPPRDDF 164
>tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_26976 PE=4 SV=1
Length = 259
Score = 150 bits (379), Expect = 9e-35
Identities = 76/143 (53%), Positives = 100/143 (69%), Gaps = 3/143 (2%)
Frame = +1
Query: 1 GRSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLRVNFPNRNRGDAPTPRAPRMDQNN-- 174
GRSRGFGFVTMS+ E+ A+E+ +G + GR LRVN D PR+PR +N
Sbjct: 113 GRSRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFD 172
Query: 175 -SNKLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQA 351
SNKL+VGNLAWGVD+ L +LFSE G VL+A+V+ DRE+GRSRGFGFVT + EVN A
Sbjct: 173 SSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNA 232
Query: 352 LNKMDGAAIEGRNLRVNMAGERP 420
++ +DG ++GR +RV +A +P
Sbjct: 233 ISNLDGVDLDGRQIRVTVAESKP 255
Score = 80.9 bits (198), Expect = 9e-14
Identities = 44/86 (51%), Positives = 52/86 (60%)
Frame = +1
Query: 181 KLFVGNLAWGVDDGMLHDLFSEHGKVLEARVVNDRETGRSRGFGFVTMSTEAEVNQALNK 360
K+FVGNL + VD L LF + G V VV DR+TGRSRGFGFVTMST E A+ +
Sbjct: 76 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 135
Query: 361 MDGAAIEGRNLRVNMAGERPSSRSDF 438
+G +GR LRVN P R DF
Sbjct: 136 FNGYTFQGRPLRVNSG--PPPPRDDF 159
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