DK949212
Clone id TST38A01NGRL0005_G05
Library
Length 679
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_G05. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GCTAGGAAAATGATCCCTCGTCTATTCCGGAGAAGATAGAAGTATTTCCGCGCAGTGCAC
AGTTGGAGTTGCGCAGTAACAACCCACGCCGTTACATCCAGCCGAGTATTTAGGCGAAGG
GGGAATACCCCCCCTTTTTTTGTGTATTCATATGGCATCATTTTCTCAATATTGGTGAAA
AGACTTGCCTGTGAGACAAGCGTGGGCTTGTCAGGTCATGAGAAAAAGAGGCCTCTGTAC
GAGGAAGGAATCAAACATTGAGAGATGATTGATCGCGGGCGGGACTAGATTTGAACCCTT
GGCCATAGTCAGTATGAACTGGAACCTTACCACTACCCGGGGAATCGATGAATAATTAAA
AAGGTTTGTGGATTTCGTTTCAATCTTAGTGGAGTCTCCCAGTTAGCAGTTATTAAATCC
AGCAAAAAAGGAATGAAAATCCGGTTTAGGAGTTGACAGGACTAGAGAGATATTGGTACA
ATTGAATCGGTTCACAGAACTCCCTCACGTTCCTTTGCTTCGAAACGAGGGTAGGCACAC
CAGACACAAAATTGAGTGATGCGTAATACGGACGGAGGTTCGAATCCTCGCAAGGCGTCC
GGAACAAAAGTCGTCTTGCATTTCCGGAATAAGTCTCCCGACCCCTTGCTTTCCACCAAG
AGAAAGCAAAAAGAACCCG
■■Homology search results ■■ -
sp_hit_id P41062
Definition sp|P41062|CP84_BP186 Uncharacterized 37.8 kDa protein in gpa 5'region OS=Enterobacteria phage 186
Align length 43
Score (bit) 33.5
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949212|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_G05, 5'
(679 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P41062|CP84_BP186 Uncharacterized 37.8 kDa protein in gpa 5'r... 33 1.1
sp|P72477|ABCX_STRMU Putative ABC transporter ATP-binding protei... 31 6.9

>sp|P41062|CP84_BP186 Uncharacterized 37.8 kDa protein in gpa
5'region OS=Enterobacteria phage 186 GN=CP84 PE=3 SV=1
Length = 334

Score = 33.5 bits (75), Expect = 1.1
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Frame = -2

Query: 138 KRGGIPPSPKYSAGCNGVGCYCATPTVHC-----AEILLSSPE 25
KR GI P+P Y GC+ VGC P +H AEI PE
Sbjct: 211 KRHGIKPNPLYQQGCSRVGC---MPCIHARKSELAEIFARWPE 250


>sp|P72477|ABCX_STRMU Putative ABC transporter ATP-binding protein
OS=Streptococcus mutans GN=abcX PE=3 SV=2
Length = 260

Score = 30.8 bits (68), Expect = 6.9
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2

Query: 386 LVESPS*QLLNPAKKE*KSGLGVDRTREILVQLNRFTELPHVPLLRNEGRHTRH---KIE 556
L+E P +L+ A SGL + ++L Q+ + TELPH P + H K+
Sbjct: 156 LMEDPEIIILDEAT----SGLDLFAREKLLTQVEKITELPHAPTILYVTHHAEEITDKMS 211

Query: 557 *CVIRTEVRILARRPEQ 607
++ +I+A+ P++
Sbjct: 212 HILLLRRGKIVAQGPKK 228


tr_hit_id B2AKP5
Definition tr|B2AKP5|B2AKP5_PODAN Predicted CDS Pa_5_7850 OS=Podospora anserina
Align length 69
Score (bit) 35.8
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949212|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_G05, 5'
(679 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B2AKP5|B2AKP5_PODAN Predicted CDS Pa_5_7850 OS=Podospora anse... 36 2.6
tr|B8HLS9|B8HLS9_9CHRO Metallophosphoesterase OS=Cyanothece sp. ... 35 5.8

>tr|B2AKP5|B2AKP5_PODAN Predicted CDS Pa_5_7850 OS=Podospora
anserina PE=4 SV=1
Length = 418

Score = 35.8 bits (81), Expect = 2.6
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +2

Query: 20 VYSGEDRSISAQCTVGVAQ*QPTPLHPAEYLG----EGGIPPLFLCIHMASFSQYW*KDL 187
V+S +++A CT+G + P P +Y+ E PPL+LC + F+ + ++
Sbjct: 316 VFSSAYCALAASCTIGQSDGFLKPRRPRDYVQLPSQENNRPPLYLCDQIDDFNSHVLQEP 375

Query: 188 PVRQAWACQ 214
P + W Q
Sbjct: 376 PSTRGWVLQ 384


>tr|B8HLS9|B8HLS9_9CHRO Metallophosphoesterase OS=Cyanothece sp. PCC
7425 GN=Cyan7425_1187 PE=4 SV=1
Length = 243

Score = 34.7 bits (78), Expect = 5.8
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = -1

Query: 673 LFAFSWWKARGRETYSGNARRLLFRTPCEDSNLRPYYASLNFV----SGV-PTLVSKQRN 509
L SW + GRET +G R LF E PY+ L + +GV PTL ++
Sbjct: 84 LHLLSWLSSGGRETIAGYTSRDLFLEHMEWMQTLPYFLDLGDIWLVHAGVEPTLPLAEQT 143

Query: 508 VREFC 494
EFC
Sbjct: 144 TEEFC 148