DK949223 |
Clone id |
TST38A01NGRL0005_G17 |
Library |
TST38 |
Length |
697 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_G17. 5' end sequence. |
Accession |
DK949223 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL2962Contig1 |
Sequence |
GAGAATCGAGATGTTGACACGGAGCTATTGCAACGCGTCTGCCACACTGTCGCTCCCTCT ACTTGACCTGTGCCACACCGTCGGAACACCAATTTTTCTTAGTCTTCTCCACTTGACGTC GTTTCGCTGCTGCTATCTGTGAATATAGTGGATCTTGAATCTACAGACTTGACAAGCTTC CCGTGGCAGTTTGCCTTACTCTACTCACAATGTCTGGTCTCTCACTTGCTGTGGGGCCGC GCCATGGGCAGACAAAGTCTGACAAAGAGGATGATGGCTCACCAAAGGGTTTAATGGGCT CAATACGAACAATAGAGTTGCAGCTTGTTGCCTTTATTGTTGTATTTTCAGCAAGCGGTT TGGTGCCCGTTGCAGATCTTTTATTTCCTGTCTTTGTAACACCGTATCTGTATTTTCTCT CGAAATTTAATTTTCCCACCGTCGGCAAGGAGGGTGTTAGCATGGAAGTCTTCCATGGGA GCCGAATGTTCCAGCTTTATCTAGTACTAGGCACAGTGCTCGGTCTGTTCTTTCCACTGG CATATGTGCTCGGGGGGTTTGCCAGAGGAGATCAACATGCAGTCAGAGCAAGCACACCCC ACTTGTTTCTTCTTTCAGTACAGATTCTCAGTGAGAATCTAGTTAGCAACCTTGCTGTTT GGTCACCGCCTGTTCGTGCCTTTCTGGTTGCCATCTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P30777 |
Definition |
sp|P30777|GPI10_YEAST GPI mannosyltransferase 3 OS=Saccharomyces cerevisiae |
Align length |
84 |
Score (bit) |
33.5 |
E-value |
1.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NSA3 |
Definition |
tr|A9NSA3|A9NSA3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
163 |
Score (bit) |
198.0 |
E-value |
2.0e-49 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949223|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_G17, 5' (697 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NSA3|A9NSA3_PICSI Putative uncharacterized protein OS=Picea... 198 2e-49 tr|Q9C7F4|Q9C7F4_ARATH Putative uncharacterized protein F13K9.9 ... 193 1e-47 tr|A9S1T4|A9S1T4_PHYPA Predicted protein OS=Physcomitrella paten... 189 1e-46 tr|A5BC59|A5BC59_VITVI Putative uncharacterized protein OS=Vitis... 189 1e-46 tr|A7R372|A7R372_VITVI Chromosome undetermined scaffold_488, who... 188 2e-46 tr|A9U092|A9U092_PHYPA Predicted protein OS=Physcomitrella paten... 186 1e-45 tr|Q7XLP6|Q7XLP6_ORYSJ Os04g0386700 protein OS=Oryza sativa subs... 176 1e-42 tr|Q01KZ9|Q01KZ9_ORYSA OSIGBa0148P16.6 protein OS=Oryza sativa G... 176 1e-42 tr|A9STS0|A9STS0_PHYPA Predicted protein OS=Physcomitrella paten... 175 2e-42 tr|Q6J9F5|Q6J9F5_9LILI Putative uncharacterized protein OS=Xerop... 174 4e-42 tr|B6SI10|B6SI10_MAIZE Putative uncharacterized protein OS=Zea m... 173 1e-41 tr|B8AT71|B8AT71_ORYSI Putative uncharacterized protein OS=Oryza... 140 1e-31 tr|A9NZP1|A9NZP1_PICSI Putative uncharacterized protein OS=Picea... 102 3e-20 tr|A9SX08|A9SX08_PHYPA Predicted protein OS=Physcomitrella paten... 101 4e-20 tr|Q8GZ91|Q8GZ91_ARATH Putative uncharacterized protein At1g2799... 99 3e-19 tr|A9SKM0|A9SKM0_PHYPA Predicted protein OS=Physcomitrella paten... 91 7e-17 tr|A9RW77|A9RW77_PHYPA Predicted protein (Fragment) OS=Physcomit... 89 3e-16 tr|A7QG28|A7QG28_VITVI Chromosome undetermined scaffold_91, whol... 86 2e-15 tr|Q9FHB8|Q9FHB8_ARATH Genomic DNA, chromosome 5, TAC clone:K24M... 83 1e-14 tr|Q94A91|Q94A91_ARATH AT5g52420/K24M7_17 OS=Arabidopsis thalian... 83 1e-14 tr|Q9FF88|Q9FF88_ARATH Arabidopsis thaliana genomic DNA, chromos... 79 3e-13 tr|Q94LU1|Q94LU1_ORYSJ Os10g0548100 protein OS=Oryza sativa subs... 71 6e-11 tr|A2Z9Y9|A2Z9Y9_ORYSI Putative uncharacterized protein OS=Oryza... 71 6e-11 tr|B8PWQ3|B8PWQ3_ORYSI DM280 protein OS=Oryza sativa subsp. indi... 70 1e-10 tr|A3C722|A3C722_ORYSJ Putative uncharacterized protein OS=Oryza... 69 2e-10 tr|B6SLB7|B6SLB7_MAIZE Putative uncharacterized protein OS=Zea m... 67 1e-09 tr|B8ACL8|B8ACL8_ORYSI Putative uncharacterized protein OS=Oryza... 46 0.002 tr|A1SNY1|A1SNY1_NOCSJ Metallophosphoesterase OS=Nocardioides sp... 40 0.14 tr|Q24RR2|Q24RR2_DESHY Putative uncharacterized protein OS=Desul... 37 1.2 tr|B8FR52|B8FR52_DESHD Putative uncharacterized protein OS=Desul... 37 1.2
>tr|A9NSA3|A9NSA3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 261
Score = 198 bits (504), Expect = 2e-49 Identities = 103/163 (63%), Positives = 127/163 (77%), Gaps = 4/163 (2%) Frame = +3
Query: 210 MSGLSLAVGPRHGQTKSDKEDD----GSPKGLMGSIRTIELQLVAFIVVFSASGLVPVAD 377 MSGLSLAV PR G ++ E D G G+MGS+R IELQLVAFI+VFSASGLVP+ D Sbjct: 1 MSGLSLAVAPRLGSGMNEGEKDVRGQGLMGGVMGSLRVIELQLVAFILVFSASGLVPLVD 60
Query: 378 LLFPVFVTPYLYFLSKFNFPTVGKEGVSMEVFHGSRMFQLYLVLGTVLGLFFPLAYVLGG 557 L+ P+FV+ YL LS++ FP+ G + EVFHGSRMFQ Y+V+GT +GLF PL+YVLGG Sbjct: 61 LVSPLFVSLYLLALSRWAFPSYRTPGNAAEVFHGSRMFQFYVVVGTTVGLFLPLSYVLGG 120
Query: 558 FARGDQHAVRASTPHLFLLSVQILSENLVSNLAVWSPPVRAFL 686 FARGDQ AVR++TPHLFLLS QILSENL+ L+++SPPVR + Sbjct: 121 FARGDQEAVRSATPHLFLLSFQILSENLIMGLSIFSPPVRVLV 163
>tr|Q9C7F4|Q9C7F4_ARATH Putative uncharacterized protein F13K9.9 OS=Arabidopsis thaliana GN=At1g27990 PE=4 SV=1 Length = 271
Score = 193 bits (490), Expect = 1e-47 Identities = 99/170 (58%), Positives = 125/170 (73%), Gaps = 11/170 (6%) Frame = +3
Query: 210 MSGLSLAVGPRHGQTKSDKEDD-----------GSPKGLMGSIRTIELQLVAFIVVFSAS 356 MSG+SLAVGPR K+ + G GLMGS+R IELQLVAFI+VFSAS Sbjct: 1 MSGVSLAVGPRTDVDKTASSSEKGRWSGMTAIGGGSGGLMGSLRVIELQLVAFILVFSAS 60
Query: 357 GLVPVADLLFPVFVTPYLYFLSKFNFPTVGKEGVSMEVFHGSRMFQLYLVLGTVLGLFFP 536 GLVP+ D+LFP F + Y+ LS+ FP+ G S EVF GS++F+LY++ GT +GLF P Sbjct: 61 GLVPILDMLFPAFASIYIIALSRLAFPSHGVSTASPEVFRGSKLFRLYVISGTTIGLFLP 120
Query: 537 LAYVLGGFARGDQHAVRASTPHLFLLSVQILSENLVSNLAVWSPPVRAFL 686 LAYVLGGFARGD HAVR++TPHLFLLS QIL+EN++S L+++SPPVRA + Sbjct: 121 LAYVLGGFARGDDHAVRSATPHLFLLSCQILTENVISGLSLFSPPVRALV 170
>tr|A9S1T4|A9S1T4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_180370 PE=4 SV=1 Length = 279
Score = 189 bits (481), Expect = 1e-46 Identities = 100/168 (59%), Positives = 126/168 (75%), Gaps = 9/168 (5%) Frame = +3
Query: 210 MSGLSLAVGPR----HGQTKSDKEDDGSPK-----GLMGSIRTIELQLVAFIVVFSASGL 362 MSG +LA GPR +T+ +K D + G+MGS+R IELQLVAFI+VFSASGL Sbjct: 1 MSGATLATGPRIPKHDAETRGEKYDRRAGDTAGLGGIMGSLRVIELQLVAFIIVFSASGL 60
Query: 363 VPVADLLFPVFVTPYLYFLSKFNFPTVGKEGVSMEVFHGSRMFQLYLVLGTVLGLFFPLA 542 VP+ DL+FPVF+T Y + L+ FP G S++VF G+R+FQ+Y++LGTV+GLF PLA Sbjct: 61 VPIVDLVFPVFLTIYAFLLNSLVFPNYGNPE-SLQVFRGNRLFQVYVILGTVIGLFLPLA 119
Query: 543 YVLGGFARGDQHAVRASTPHLFLLSVQILSENLVSNLAVWSPPVRAFL 686 YVLGGFAR DQ AVRA+TPHLFLLS Q+LSENL+S L ++S PVRA L Sbjct: 120 YVLGGFARNDQDAVRAATPHLFLLSFQVLSENLISGLNIFSVPVRALL 167
>tr|A5BC59|A5BC59_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014982 PE=4 SV=1 Length = 279
Score = 189 bits (480), Expect = 1e-46 Identities = 99/177 (55%), Positives = 127/177 (71%), Gaps = 18/177 (10%) Frame = +3
Query: 210 MSGLSLAVGPRHGQTKSDKEDDGSPK----------------GLMGSIRTIELQLVAFIV 341 MSG+SLAV PR K+ + P+ G+MGS+R IELQLVAFI+ Sbjct: 1 MSGVSLAVAPRTEPDKTTTTPNTKPQQQPGRHNHHQQQSVVGGVMGSLRVIELQLVAFIM 60
Query: 342 VFSASGLVPVADLLFPVFVTPYLYFLSKFNFPTVGKEGV--SMEVFHGSRMFQLYLVLGT 515 VFSASGLVP+ DL+FP F + YL LS+F FP G S E+F GSR+F+LY+++GT Sbjct: 61 VFSASGLVPLLDLIFPAFASAYLLALSRFAFPAHGSSTSTGSQEIFQGSRLFRLYVIVGT 120
Query: 516 VLGLFFPLAYVLGGFARGDQHAVRASTPHLFLLSVQILSENLVSNLAVWSPPVRAFL 686 +GLF PLAYVLGGFARGD+HAVR++TPHLFLLS QIL+EN++S L+++SPPVRA + Sbjct: 121 AIGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENIISGLSLFSPPVRALV 177
>tr|A7R372|A7R372_VITVI Chromosome undetermined scaffold_488, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013488001 PE=4 SV=1 Length = 279
Score = 188 bits (478), Expect = 2e-46 Identities = 99/177 (55%), Positives = 127/177 (71%), Gaps = 18/177 (10%) Frame = +3
Query: 210 MSGLSLAVGPRHGQTKSDKEDDGSPK----------------GLMGSIRTIELQLVAFIV 341 MSG+SLAV PR K+ + P+ G+MGS+R IELQLVAFI+ Sbjct: 1 MSGVSLAVAPRTEPDKTTTTPNTKPQQQPGRHNHHHQQSVVGGVMGSLRVIELQLVAFIM 60
Query: 342 VFSASGLVPVADLLFPVFVTPYLYFLSKFNFPTVGKEGV--SMEVFHGSRMFQLYLVLGT 515 VFSASGLVP+ DL+FP F + YL LS+F FP G S E+F GSR+F+LY+++GT Sbjct: 61 VFSASGLVPLLDLIFPAFASAYLLALSRFAFPAHGSTTSTGSREIFQGSRLFRLYVIVGT 120
Query: 516 VLGLFFPLAYVLGGFARGDQHAVRASTPHLFLLSVQILSENLVSNLAVWSPPVRAFL 686 +GLF PLAYVLGGFARGD+HAVR++TPHLFLLS QIL+EN++S L+++SPPVRA + Sbjct: 121 AIGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENIISGLSLFSPPVRALV 177
>tr|A9U092|A9U092_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227130 PE=4 SV=1 Length = 289
Score = 186 bits (472), Expect = 1e-45 Identities = 102/169 (60%), Positives = 124/169 (73%), Gaps = 10/169 (5%) Frame = +3
Query: 210 MSGLSLAVGPR--------HGQTKSDKE--DDGSPKGLMGSIRTIELQLVAFIVVFSASG 359 MSG +LA GPR HG+ K D+ D G+MGS+R IELQLVAFI+VFSASG Sbjct: 1 MSGATLAAGPRIPKHIDETHGE-KYDRRAGDTAGLGGIMGSLRVIELQLVAFIIVFSASG 59
Query: 360 LVPVADLLFPVFVTPYLYFLSKFNFPTVGKEGVSMEVFHGSRMFQLYLVLGTVLGLFFPL 539 LVP+ DL FPVF++ Y + LS FP G S++VF G+R+FQLY+V GTV+GLF PL Sbjct: 60 LVPLLDLAFPVFLSIYAFLLSALVFPNYGN-AESLQVFKGNRLFQLYVVFGTVIGLFLPL 118
Query: 540 AYVLGGFARGDQHAVRASTPHLFLLSVQILSENLVSNLAVWSPPVRAFL 686 AYVLGGFAR DQ +VRA+TPHLFLLS Q+LSENL+S L ++S PVRA L Sbjct: 119 AYVLGGFARNDQDSVRAATPHLFLLSFQVLSENLISGLNIFSVPVRALL 167
>tr|Q7XLP6|Q7XLP6_ORYSJ Os04g0386700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0044M19.10 PE=2 SV=2 Length = 274
Score = 176 bits (447), Expect = 1e-42 Identities = 99/171 (57%), Positives = 119/171 (69%), Gaps = 12/171 (7%) Frame = +3
Query: 210 MSGLSLAVGPRHGQTKSDKEDDGSPK------GLMGSIRTIELQLVAFIVVFSASGLVPV 371 MSG+SLAVGPR T + G + G+MGS+R IELQLVAFI+VFSASGLVP+ Sbjct: 1 MSGMSLAVGPRTSGTDDTAAERGQQQPSTMLGGVMGSLRVIELQLVAFIMVFSASGLVPL 60
Query: 372 ADLLFPVFVTPYLYFLSKFNFPTV-----GKEGVSMEVFHGSRMFQLYLVLGTVLGLFFP 536 DL FPV T YL LS+ +FP + S E+F GS FQ Y+VLGT +GLF P Sbjct: 61 IDLAFPVATTLYLLLLSRLSFPPLHSTLPSSSSSSQEIFRGSTWFQAYVVLGTTVGLFLP 120
Query: 537 LAYVLGGFARGDQHAVRASTPHLFLLSVQILSENLVSNL-AVWSPPVRAFL 686 LA+VLGGFARGD AVR++TPHLFLLS QIL+EN+V L A +SPPVRA + Sbjct: 121 LAHVLGGFARGDDGAVRSATPHLFLLSCQILTENVVGALGAAFSPPVRALV 171
>tr|Q01KZ9|Q01KZ9_ORYSA OSIGBa0148P16.6 protein OS=Oryza sativa GN=OSIGBa0148P16.6 PE=4 SV=1 Length = 274
Score = 176 bits (447), Expect = 1e-42 Identities = 99/171 (57%), Positives = 119/171 (69%), Gaps = 12/171 (7%) Frame = +3
Query: 210 MSGLSLAVGPRHGQTKSDKEDDGSPK------GLMGSIRTIELQLVAFIVVFSASGLVPV 371 MSG+SLAVGPR T + G + G+MGS+R IELQLVAFI+VFSASGLVP+ Sbjct: 1 MSGMSLAVGPRTSGTDDTAAERGQQQPSTMLGGVMGSLRVIELQLVAFIMVFSASGLVPL 60
Query: 372 ADLLFPVFVTPYLYFLSKFNFPTV-----GKEGVSMEVFHGSRMFQLYLVLGTVLGLFFP 536 DL FPV T YL LS+ +FP + S E+F GS FQ Y+VLGT +GLF P Sbjct: 61 IDLAFPVATTLYLLLLSRLSFPPLHSTLPSSSSSSQEIFRGSTWFQAYVVLGTTVGLFLP 120
Query: 537 LAYVLGGFARGDQHAVRASTPHLFLLSVQILSENLVSNL-AVWSPPVRAFL 686 LA+VLGGFARGD AVR++TPHLFLLS QIL+EN+V L A +SPPVRA + Sbjct: 121 LAHVLGGFARGDDGAVRSATPHLFLLSCQILTENVVGALGAAFSPPVRALV 171
>tr|A9STS0|A9STS0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_110083 PE=4 SV=1 Length = 292
Score = 175 bits (444), Expect = 2e-42 Identities = 93/167 (55%), Positives = 117/167 (70%), Gaps = 8/167 (4%) Frame = +3
Query: 210 MSGLSLAVGPRHGQTKSDK--------EDDGSPKGLMGSIRTIELQLVAFIVVFSASGLV 365 MSG +LA GPR + + + D G G+MGS R IELQL+AFIVVFSASGLV Sbjct: 1 MSGATLAAGPRMAKERKGRLSAVDENVSDFGGLGGVMGSFRVIELQLMAFIVVFSASGLV 60
Query: 366 PVADLLFPVFVTPYLYFLSKFNFPTVGKEGVSMEVFHGSRMFQLYLVLGTVLGLFFPLAY 545 P+ D+LFPV ++ Y + K FP + + VF G+R+FQ Y++ GT++GLF PLAY Sbjct: 61 PLIDILFPVVISIYAVVIGKLVFPRY--KNAELSVFKGNRVFQAYVIFGTLVGLFLPLAY 118
Query: 546 VLGGFARGDQHAVRASTPHLFLLSVQILSENLVSNLAVWSPPVRAFL 686 VLGGFAR DQ AVRA+TPHLFLLS Q+LSENLVS L ++S PVRA + Sbjct: 119 VLGGFARNDQEAVRAATPHLFLLSCQVLSENLVSGLQIFSLPVRALM 165
>tr|Q6J9F5|Q6J9F5_9LILI Putative uncharacterized protein OS=Xerophyta humilis PE=2 SV=1 Length = 239
Score = 174 bits (442), Expect = 4e-42 Identities = 88/131 (67%), Positives = 107/131 (81%) Frame = +3
Query: 294 MGSIRTIELQLVAFIVVFSASGLVPVADLLFPVFVTPYLYFLSKFNFPTVGKEGVSMEVF 473 MGS+R IELQLVAFI+VFSASGLVP+ DL+FPVF T Y LS+ FPT + + EVF Sbjct: 1 MGSLRVIELQLVAFIMVFSASGLVPLFDLVFPVFATAYFIILSRVAFPTYHTQ--AREVF 58
Query: 474 HGSRMFQLYLVLGTVLGLFFPLAYVLGGFARGDQHAVRASTPHLFLLSVQILSENLVSNL 653 HGS+ FQ Y+V+GT +GLF PLAYVLGGFARGD AVRA+TPHLFLLS QIL+EN++S L Sbjct: 59 HGSKPFQAYVVIGTAVGLFLPLAYVLGGFARGDNMAVRAATPHLFLLSCQILTENVISGL 118
Query: 654 AVWSPPVRAFL 686 +++SPPVRA + Sbjct: 119 SLFSPPVRALV 129
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