DK949257 |
Clone id |
TST38A01NGRL0005_I04 |
Library |
TST38 |
Length |
692 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_I04. 5' end sequence. |
Accession |
DK949257 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1083Contig1 |
Sequence |
GAGCAATGAGAATCTCTGCGTAAGAGCCGGCTACCCATTTTCGTTAGGCACAAAAAAAAA TTTGTTTGGTAATAAGGGAGAGAAGCTTTCTCCCTCCACTCTCTCCCCCCTCTCGCAGCA AGTCATGGCGTACAGATCTGATGATGACTACGATTACCTGTTCAAGGTGGTGCTGATAGG CGATTCGGGCGTTGGCAAGTCCAACTTGCTATCCAGATTCACTCGCAACGAGTTCAGTCT CGAGTCCAAGTCCACCATTGGGGTAGAGTTTGCTACACACAGCATCAACGTCGATGGCAA GACGATCAAGGCACAGATCTGGGACACTGCCGGCCAAGAAAGGTACAGAGCCATTACCAG TGCGTACTACCGAGGTGCAGTGGGTGCATTGTTGGTATATGATATAACAAGACATGTGAC ATTTGAGAACGTTGAGCGGTGGTTGAAGGAGCTGAAGGATCACACGGATTCGAATATCGT GGTTATGCTGGTGGGCAACAAGTCCGATCTACGTCATCTAAGAGCAGTATCAGCGGACGA CAGCCAGGCTTTTGCAGAGAGAGAGGGTCTGTACTTCATGGAAACGTCGGCCTTGGAATC AACAAATGTAGAGAATGCATTCAAGCAAATTCTTACTCAGATTTATAGGGTTGTCAGCAA GAAAGCCCTCGATATTGGCGAAGATCCCGCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P40393 |
Definition |
sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica |
Align length |
179 |
Score (bit) |
316.0 |
E-value |
6.0e-86 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NV29 |
Definition |
tr|A9NV29|A9NV29_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
181 |
Score (bit) |
335.0 |
E-value |
2.0e-90 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949257|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_I04, 5' (669 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NV29|A9NV29_PICSI Putative uncharacterized protein OS=Picea... 335 2e-90 tr|A9NZD1|A9NZD1_PICSI Putative uncharacterized protein OS=Picea... 324 3e-87 tr|A7QPP6|A7QPP6_VITVI Chromosome chr10 scaffold_138, whole geno... 319 1e-85 tr|Q68HC1|Q68HC1_WHEAT Rab GTP-binding protein OS=Triticum aesti... 318 1e-85 tr|A9T2Z0|A9T2Z0_PHYPA Rab11/RabA-family small GTPase OS=Physcom... 318 1e-85 tr|Q6AUF8|Q6AUF8_ORYSJ Os05g0564400 protein OS=Oryza sativa subs... 318 2e-85 tr|A9TDJ8|A9TDJ8_PHYPA Rab11/RabA-family small GTPase OS=Physcom... 318 3e-85 tr|A9SJB2|A9SJB2_PHYPA Predicted protein OS=Physcomitrella paten... 318 3e-85 tr|A7QDG9|A7QDG9_VITVI Chromosome chr10 scaffold_81, whole genom... 318 3e-85 tr|A7P1V6|A7P1V6_VITVI Chromosome chr19 scaffold_4, whole genome... 318 3e-85 tr|Q0J2L0|Q0J2L0_ORYSJ Os09g0327100 protein (Fragment) OS=Oryza ... 317 3e-85 tr|B4FIB2|B4FIB2_MAIZE Putative uncharacterized protein OS=Zea m... 317 3e-85 tr|Q6K2P6|Q6K2P6_ORYSJ cDNA clone:J023092H24, full insert sequen... 317 6e-85 tr|Q08149|Q08149_PEA GTP-binding protein OS=Pisum sativum PE=2 SV=1 317 6e-85 tr|A9RQ44|A9RQ44_PHYPA Rab11/RabA-family small GTPase OS=Physcom... 317 6e-85 tr|A2YZX0|A2YZX0_ORYSI Putative uncharacterized protein OS=Oryza... 317 6e-85 tr|Q0DBM2|Q0DBM2_ORYSJ Os06g0551400 protein OS=Oryza sativa subs... 316 7e-85 tr|A2YDY6|A2YDY6_ORYSI Putative uncharacterized protein OS=Oryza... 316 7e-85 tr|A9RSL8|A9RSL8_PHYPA Rab11/RabA-family small GTPase OS=Physcom... 316 1e-84 tr|B6TJP1|B6TJP1_MAIZE Ras-related protein RIC2 OS=Zea mays PE=2... 315 1e-84 tr|B4FE06|B4FE06_MAIZE Putative uncharacterized protein OS=Zea m... 315 1e-84 tr|A5ART2|A5ART2_VITVI Putative uncharacterized protein OS=Vitis... 315 1e-84 tr|Q9FJH0|Q9FJH0_ARATH GTP-binding protein, ras-like (At5g60860)... 315 2e-84 tr|A9P9U7|A9P9U7_POPTR Putative uncharacterized protein OS=Popul... 313 5e-84 tr|B2ZAR1|B2ZAR1_GOSRA Putative GTP-binding protein OS=Gossypium... 313 6e-84 tr|Q9SN35|Q9SN35_ARATH Ras-like GTP-binding protein (Putative ra... 313 8e-84 tr|Q6DXU0|Q6DXU0_GOSHI Putative GTP-binding protein OS=Gossypium... 313 8e-84 tr|B4FQ28|B4FQ28_MAIZE Putative uncharacterized protein OS=Zea m... 313 8e-84 tr|Q9LK99|Q9LK99_ARATH GTP-binding protein-like (Putative Ras fa... 312 1e-83 tr|A5BUD1|A5BUD1_VITVI Putative uncharacterized protein (Chromos... 312 1e-83
>tr|A9NV29|A9NV29_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 216
Score = 335 bits (858), Expect = 2e-90 Identities = 167/181 (92%), Positives = 175/181 (96%) Frame = +2
Query: 125 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATHSINVDGKT 304 MAY+ DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFAT SINVDGK Sbjct: 1 MAYKVDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKM 60
Query: 305 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 484 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKEL+DHT+ NIVV Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNIVV 120
Query: 485 MLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 664 MLVGNKSDLRHLRAVS +D+Q FAEREGLYF+ETSALESTNVENAFKQ+LTQIYR+VSKK Sbjct: 121 MLVGNKSDLRHLRAVSTEDAQTFAEREGLYFIETSALESTNVENAFKQVLTQIYRIVSKK 180
Query: 665 A 667 A Sbjct: 181 A 181
>tr|A9NZD1|A9NZD1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 217
Score = 324 bits (831), Expect = 3e-87 Identities = 160/181 (88%), Positives = 172/181 (95%) Frame = +2
Query: 125 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATHSINVDGKT 304 MAYR+DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFAT SI VD K Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKV 60
Query: 305 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 484 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRHVTFENVERWLKEL+DHTD+NIV+ Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVI 120
Query: 485 MLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 664 MLVGNK+DLRHLRAVS +D +AFAERE YFMETSALESTNVENAF ++L+QIYR+VSKK Sbjct: 121 MLVGNKADLRHLRAVSIEDGKAFAERENTYFMETSALESTNVENAFTEVLSQIYRIVSKK 180
Query: 665 A 667 A Sbjct: 181 A 181
>tr|A7QPP6|A7QPP6_VITVI Chromosome chr10 scaffold_138, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003022001 PE=3 SV=1 Length = 217
Score = 319 bits (817), Expect = 1e-85 Identities = 157/180 (87%), Positives = 171/180 (95%) Frame = +2
Query: 128 AYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATHSINVDGKTI 307 +YR+DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFAT SI VD K + Sbjct: 3 SYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 62
Query: 308 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVM 487 KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRHVTFENVERWLKEL+DHTDSNIV+M Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
Query: 488 LVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKKA 667 LVGNK+DLRHLRAVS +D++AFAERE +FMETSALES NVENAF ++LTQIYRVVS+KA Sbjct: 123 LVGNKADLRHLRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
>tr|Q68HC1|Q68HC1_WHEAT Rab GTP-binding protein OS=Triticum aestivum PE=2 SV=1 Length = 216
Score = 318 bits (816), Expect = 1e-85 Identities = 157/181 (86%), Positives = 172/181 (95%) Frame = +2
Query: 125 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATHSINVDGKT 304 MAYR+DDDYDYLFKVVLIGDSGVGKSNLL+RFTRNEFSLESKSTIGVEFAT SI VD K Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 305 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 484 +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKELKDHTD+NIV+ Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVI 120
Query: 485 MLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 664 MLVGNK+DLRHLRAVS +D++AFAERE +FMETSALES NVE+AF ++LTQIYRVVSKK Sbjct: 121 MLVGNKADLRHLRAVSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVSKK 180
Query: 665 A 667 A Sbjct: 181 A 181
>tr|A9T2Z0|A9T2Z0_PHYPA Rab11/RabA-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabA24 PE=3 SV=1 Length = 216
Score = 318 bits (816), Expect = 1e-85 Identities = 157/181 (86%), Positives = 173/181 (95%) Frame = +2
Query: 125 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATHSINVDGKT 304 MA+++DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT SI VDGKT Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 305 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 484 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT+HVT+ENVERWLKEL+DH DSNIV+ Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVI 120
Query: 485 MLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 664 MLVGNKSDLRHLR VS DD+Q+FAE+EGL F+ETSALESTNVE AF++ILT+IYR+VSKK Sbjct: 121 MLVGNKSDLRHLRGVSLDDAQSFAEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKK 180
Query: 665 A 667 A Sbjct: 181 A 181
>tr|Q6AUF8|Q6AUF8_ORYSJ Os05g0564400 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0053D02.13 PE=2 SV=1 Length = 217
Score = 318 bits (815), Expect = 2e-85 Identities = 155/181 (85%), Positives = 172/181 (95%) Frame = +2
Query: 125 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATHSINVDGKT 304 MAYR+DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFAT SI+VD K Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV 60
Query: 305 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 484 +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERW++ELKDHTD+NIV+ Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVI 120
Query: 485 MLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 664 MLVGNK+DLRHLRAVS +D++AFAE+E +FMETSALES NVENAF ++LTQIY VVSKK Sbjct: 121 MLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKK 180
Query: 665 A 667 A Sbjct: 181 A 181
>tr|A9TDJ8|A9TDJ8_PHYPA Rab11/RabA-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabA21 PE=3 SV=1 Length = 215
Score = 318 bits (814), Expect = 3e-85 Identities = 156/181 (86%), Positives = 173/181 (95%) Frame = +2
Query: 125 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATHSINVDGKT 304 MA+++DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT SI VDGKT Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 305 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 484 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT+HVT+ENVERWLKEL+DH DSNIV+ Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVI 120
Query: 485 MLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 664 MLVGNKSDL+HLR VS DD+QAF+E+EGL F+ETSALESTNVE AF++ILT+IYR+VSKK Sbjct: 121 MLVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKK 180
Query: 665 A 667 A Sbjct: 181 A 181
>tr|A9SJB2|A9SJB2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_185591 PE=3 SV=1 Length = 216
Score = 318 bits (814), Expect = 3e-85 Identities = 156/181 (86%), Positives = 173/181 (95%) Frame = +2
Query: 125 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATHSINVDGKT 304 MA+++DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT SI VDGKT Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 305 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 484 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT+HVT+ENVERWLKEL+DH DSNIV+ Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVI 120
Query: 485 MLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 664 MLVGNKSDL+HLR VS DD+QAF+E+EGL F+ETSALESTNVE AF++ILT+IYR+VSKK Sbjct: 121 MLVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKK 180
Query: 665 A 667 A Sbjct: 181 A 181
>tr|A7QDG9|A7QDG9_VITVI Chromosome chr10 scaffold_81, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035834001 PE=3 SV=1 Length = 218
Score = 318 bits (814), Expect = 3e-85 Identities = 155/179 (86%), Positives = 170/179 (94%) Frame = +2
Query: 131 YRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATHSINVDGKTIK 310 YR++DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFAT S+NVDGK IK Sbjct: 4 YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIK 63
Query: 311 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVML 490 AQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRH TFENVERWL+EL+DHTD NIVVML Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVML 123
Query: 491 VGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKKA 667 +GNKSDLRHL AVS +D ++FAERE LYFMETSALE+TNV+NAF ++LTQIYR+VSKKA Sbjct: 124 IGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKA 182
>tr|A7P1V6|A7P1V6_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027768001 PE=3 SV=1 Length = 217
Score = 318 bits (814), Expect = 3e-85 Identities = 157/180 (87%), Positives = 170/180 (94%) Frame = +2
Query: 128 AYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATHSINVDGKTI 307 AYR+DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFAT SI VD K + Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIV 62
Query: 308 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVM 487 KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRHVTFENVERWLKEL+DHTDS+IV+M Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIM 122
Query: 488 LVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKKA 667 LVGNK DLRHLRAVS DD++AFAERE +FMETSALES NVENAF ++LTQIY+VVS+KA Sbjct: 123 LVGNKGDLRHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKA 182
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