DK949265 |
Clone id |
TST38A01NGRL0005_I12 |
Library |
TST38 |
Length |
692 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_I12. 5' end sequence. |
Accession |
DK949265 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL2341Contig1 |
Sequence |
AGAACGTGCTGTCGACTTCATTCATCGGAATATTGAACGTGGCAAGGCTACATATGTGCA TTGCAAAGCTGGGCGAGGTCGAAGTACGACCATTGTTCTTTGCTACTTGGTCAAGTACAG AGGAATGGCACCATTTGATGCATTCAATCATGTAAGATTAAAAAGACCACGCATCCAGCT GGCAGCATCTCAATGGAAGGCTGTGCTGAGGTATAGCGAGTATCAACTTAATCAAAGATG CACCAAATTGGCCCCCTTTATATTTGTACCACAGCATTGGCCAATATGCAAGAATCTACA AGATGGTGTGGGGGATCAGATCATGGCACCAAGCGAATATGATATAACCTTTTGTGGAGA CTCACCTGTATTGGTCACTCTCTCGGACCTTGAAGGATACGAGGAGAGGAAAGAGTTGTG CAGTGACAATGAGTTTCAAGGTGAGCTGGGCTTAGTATATAAAGTGGGCATATTGACGGC AAAGAGTGTTATAGGAGTTGCAAAGGCATCGGCAACATTGGCAAGATTGTCTTACATATG GCTTGGCTACCAAACAGAGAACCAGACATTCAACATGACGCTTTCATGTGGCGCCCTATC GGATGTGAGAAGTCAGTCGGGTCAGCCCATGGTTTCCCTTCACATGTGCCAGCAAGGACT TGTAAAATGCTAGTGGGTTTATATGCATACAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q86BN8 |
Definition |
sp|Q86BN8|PTPM1_DROME Protein-tyrosine phosphatase mitochondrial 1-like protein OS=Drosophila melanogaster |
Align length |
53 |
Score (bit) |
58.2 |
E-value |
4.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9ZQP1 |
Definition |
tr|Q9ZQP1|Q9ZQP1_ARATH Expressed protein (Putative uncharacterized protein At2g35680) (Putative dual specificity phosphatase) OS=Arabidopsis thaliana |
Align length |
210 |
Score (bit) |
129.0 |
E-value |
1.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949265|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_I12, 5' (692 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9ZQP1|Q9ZQP1_ARATH Expressed protein (Putative uncharacteriz... 129 1e-28 tr|A7QY30|A7QY30_VITVI Chromosome undetermined scaffold_237, who... 121 4e-26 tr|B6T3N5|B6T3N5_MAIZE Protein-tyrosine phosphatase mitochondria... 119 2e-25 tr|A9NUV5|A9NUV5_PICSI Putative uncharacterized protein OS=Picea... 114 4e-24 tr|Q9AUS9|Q9AUS9_ORYSA Putative uncharacterized protein OSJNBb00... 114 8e-24 tr|Q7XC53|Q7XC53_ORYSJ Os10g0561900 protein OS=Oryza sativa subs... 114 8e-24 tr|A2ZA88|A2ZA88_ORYSI Putative uncharacterized protein OS=Oryza... 114 8e-24 tr|B8A2Y2|B8A2Y2_MAIZE Putative uncharacterized protein OS=Zea m... 110 1e-22 tr|Q5JNL3|Q5JNL3_ORYSJ cDNA clone:J033022G13, full insert sequen... 109 1e-22 tr|A2WUW4|A2WUW4_ORYSI Putative uncharacterized protein OS=Oryza... 109 1e-22 tr|A5C9S5|A5C9S5_VITVI Putative uncharacterized protein OS=Vitis... 108 4e-22 tr|A5BYA3|A5BYA3_VITVI Putative uncharacterized protein OS=Vitis... 108 4e-22 tr|Q0DGM1|Q0DGM1_ORYSJ Os05g0524200 protein OS=Oryza sativa subs... 107 5e-22 tr|B8B022|B8B022_ORYSI Putative uncharacterized protein OS=Oryza... 107 5e-22 tr|A7PKD0|A7PKD0_VITVI Chromosome chr15 scaffold_19, whole genom... 107 5e-22 tr|A7PEE7|A7PEE7_VITVI Chromosome chr11 scaffold_13, whole genom... 107 5e-22 tr|A9PGS3|A9PGS3_POPTR Putative uncharacterized protein OS=Popul... 107 9e-22 tr|Q3S4H8|Q3S4H8_MAIZE Dual-specificity protein-like phosphatase... 106 1e-21 tr|A3B8G3|A3B8G3_ORYSJ Putative uncharacterized protein OS=Oryza... 104 5e-21 tr|A2Y9G0|A2Y9G0_ORYSI Putative uncharacterized protein OS=Oryza... 104 5e-21 tr|Q940J5|Q940J5_ARATH Putative uncharacterized protein At2g3568... 104 6e-21 tr|Q3S4H4|Q3S4H4_MAIZE Dual-specificity protein-like phosphatase... 102 2e-20 tr|B6TA53|B6TA53_MAIZE Dual-specificity protein-like phosphatase... 102 2e-20 tr|Q1EP41|Q1EP41_MUSBA Dual specificity protein phosphatase fami... 102 3e-20 tr|B6T896|B6T896_MAIZE Protein-tyrosine phosphatase mitochondria... 99 2e-19 tr|Q108Y1|Q108Y1_ORYSJ Dual specificity phosphatase, catalytic d... 98 4e-19 tr|A5BJQ6|A5BJQ6_VITVI Putative uncharacterized protein OS=Vitis... 96 2e-18 tr|Q6NKR2|Q6NKR2_ARATH At5g56610 (Putative uncharacterized prote... 89 2e-16 tr|Q2V2X9|Q2V2X9_ARATH Uncharacterized protein At5g56610.2 OS=Ar... 89 2e-16 tr|A5APJ7|A5APJ7_VITVI Putative uncharacterized protein OS=Vitis... 89 3e-16
>tr|Q9ZQP1|Q9ZQP1_ARATH Expressed protein (Putative uncharacterized protein At2g35680) (Putative dual specificity phosphatase) OS=Arabidopsis thaliana GN=dsp8 PE=2 SV=2 Length = 337
Score = 129 bits (325), Expect = 1e-28 Identities = 80/210 (38%), Positives = 115/210 (54%), Gaps = 11/210 (5%) Frame = +2
Query: 5 RAVDFIHRNIERGKATYVHCKAGRGRSTTIVLCYLVKYRGMAPFDAFNHVRLKRPRIQLA 184 +AV+FIHRN GK TYVHCKAGRGRSTTIV+CYLV+++ M P A+++VR RPR+ LA Sbjct: 145 QAVEFIHRNASLGKTTYVHCKAGRGRSTTIVICYLVQHKNMTPEAAYSYVRSIRPRVLLA 204
Query: 185 ASQWKAVLRYSEYQL--NQRCTKLAPFIFVPQHWPICKNLQDGVGDQIMAPSEYDITFCG 358 A+QWKAV+ Y ++ Q C A +P +N++ + + F Sbjct: 205 AAQWKAVVEYYHVKVLNTQSCLTDATSALIP------RNVKQVCSGNV-------VVFDD 251
Query: 359 DSPVLVTLSDLEGYEE------RKELCSDNEF---QGELGLVYKVGILTAKSVIGVAKAS 511 S V+VT SDLEGY + R + NE +L +VY+V ++ Sbjct: 252 GSMVVVTHSDLEGYNDDDSRSRRSVKVNGNELWAAAADLSMVYRVKVV----------GQ 301
Query: 512 ATLARLSYIWLGYQTENQTFNMTLSCGALS 601 A +AR+S +WLG + + + LS G +S Sbjct: 302 AAMARISCLWLGLREDQKLSGKNLSMGGIS 331
>tr|A7QY30|A7QY30_VITVI Chromosome undetermined scaffold_237, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00009527001 PE=4 SV=1 Length = 259
Score = 121 bits (304), Expect = 4e-26 Identities = 73/188 (38%), Positives = 110/188 (58%), Gaps = 1/188 (0%) Frame = +2
Query: 5 RAVDFIHRNIERGKATYVHCKAGRGRSTTIVLCYLVKYRGMAPFDAFNHVRLKRPRIQLA 184 +AVDFIH+N G+ TYVHCKAGRGRSTTIV+CYLV+++ M P DA+++++ RPR+ LA Sbjct: 73 QAVDFIHKNATYGRTTYVHCKAGRGRSTTIVICYLVQHKHMMPADAYDYLKSIRPRVLLA 132
Query: 185 ASQWKAVLRYSEYQLNQRCTKLAPFIFVPQHWPICKNLQDGVGDQIMAPSEYDITFCGDS 364 +SQW+AV Y Y LN + T + ++ NL + +++ +E + F D+ Sbjct: 133 SSQWQAVQEY--YYLNVKKTGVCGYM---------TNLV--MKPPVLSAAEDLVAFDDDT 179
Query: 365 PVLVTLSDLEGYEERKEL-CSDNEFQGELGLVYKVGILTAKSVIGVAKASATLARLSYIW 541 V+VT SDL+GY+ E +E +L +VY+ + A LAR+S +W Sbjct: 180 IVVVTESDLDGYDPCLESGAVGSEIWADLSVVYRFRV----------AGQAALARISCLW 229
Query: 542 LGYQTENQ 565 L Y + Sbjct: 230 LRYHANQR 237
>tr|B6T3N5|B6T3N5_MAIZE Protein-tyrosine phosphatase mitochondrial 1 OS=Zea mays PE=2 SV=1 Length = 347
Score = 119 bits (297), Expect = 2e-25 Identities = 69/179 (38%), Positives = 98/179 (54%) Frame = +2
Query: 8 AVDFIHRNIERGKATYVHCKAGRGRSTTIVLCYLVKYRGMAPFDAFNHVRLKRPRIQLAA 187 A DFIHRN GK TYVHCKAGRGRSTT+V+CYLV+Y+ M P +A+ HVRL+RPR+ LA+ Sbjct: 152 AADFIHRNASCGKLTYVHCKAGRGRSTTVVICYLVQYKNMTPAEAYEHVRLRRPRVLLAS 211
Query: 188 SQWKAVLRYSEYQLNQRCTKLAPFIFVPQHWPICKNLQDGVGDQIMAPSEYDITFCGDSP 367 +QW+AV + YQL + T + ++ P P + + + F + Sbjct: 212 AQWQAVQEF--YQLTVKKTGRSTWLDNPLIKP-----------PLFLATRKLVAFDDSAF 258
Query: 368 VLVTLSDLEGYEERKELCSDNEFQGELGLVYKVGILTAKSVIGVAKASATLARLSYIWL 544 V+V+ SDLEGY + E+ L+Y+V + + G SY+WL Sbjct: 259 VMVSESDLEGYNADALALNMGSRLWEISLIYRVQFASKTAFAG----------FSYLWL 307
>tr|A9NUV5|A9NUV5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 275
Score = 114 bits (286), Expect = 4e-24 Identities = 62/134 (46%), Positives = 88/134 (65%), Gaps = 1/134 (0%) Frame = +2
Query: 5 RAVDFIHRNIERGKATYVHCKAGRGRSTTIVLCYLVKYRGMAPFDAFNHVRLKRPRIQLA 184 +AVDFIH +++ GK TYVHCKAGRGRSTTIVLCYLV+++GM P DA+ +VR KRPR+ LA Sbjct: 143 QAVDFIHEHVKSGKTTYVHCKAGRGRSTTIVLCYLVEHKGMGPVDAYAYVRSKRPRVLLA 202
Query: 185 ASQWKAVLRYSEYQLNQRCTKLAPFIFVPQHWPICKNLQDGVGDQIMAPSEYDITFC-GD 361 ASQW+AV Y+ Q + K+ + + ++ + +++ P + F D Sbjct: 203 ASQWQAVQEYTN-QRRRDINKIVASTGSSRTFNCPVSM--AISQKLVTPDGRERIFSYDD 259
Query: 362 SPVLVTLSDLEGYE 403 S V VT +DL+GY+ Sbjct: 260 SLVFVTNADLDGYK 273
>tr|Q9AUS9|Q9AUS9_ORYSA Putative uncharacterized protein OSJNBb0089A17.7 OS=Oryza sativa GN=OSJNBb0089A17.7 PE=4 SV=1 Length = 362
Score = 114 bits (284), Expect = 8e-24 Identities = 75/180 (41%), Positives = 100/180 (55%) Frame = +2
Query: 5 RAVDFIHRNIERGKATYVHCKAGRGRSTTIVLCYLVKYRGMAPFDAFNHVRLKRPRIQLA 184 RA DFIHRN GK TYVHCKAGRGRSTT+VLCYLV+Y+ M P +A+ HVRL+RPR+ LA Sbjct: 158 RAADFIHRNALCGKLTYVHCKAGRGRSTTVVLCYLVQYKQMTPAEAYEHVRLRRPRVLLA 217
Query: 185 ASQWKAVLRYSEYQLNQRCTKLAPFIFVPQHWPICKNLQDGVGDQIMAPSEYDITFCGDS 364 ++Q +AV ++ YQL R K I + PI K + + I F + Sbjct: 218 SAQRQAVEQF--YQL--RVKKSGKSICLDS--PIMK-------PPLFLATRNLIAFDEKT 264
Query: 365 PVLVTLSDLEGYEERKELCSDNEFQGELGLVYKVGILTAKSVIGVAKASATLARLSYIWL 544 V+V+ SDLEGY+ + E+ LVY+V + A A SY+W+ Sbjct: 265 FVMVSKSDLEGYDADTLAVNVGSGLWEISLVYRVQF----------ASQAAFAGFSYLWV 314
>tr|Q7XC53|Q7XC53_ORYSJ Os10g0561900 protein OS=Oryza sativa subsp. japonica GN=Os10g0561900 PE=2 SV=1 Length = 362
Score = 114 bits (284), Expect = 8e-24 Identities = 75/180 (41%), Positives = 100/180 (55%) Frame = +2
Query: 5 RAVDFIHRNIERGKATYVHCKAGRGRSTTIVLCYLVKYRGMAPFDAFNHVRLKRPRIQLA 184 RA DFIHRN GK TYVHCKAGRGRSTT+VLCYLV+Y+ M P +A+ HVRL+RPR+ LA Sbjct: 158 RAADFIHRNALCGKLTYVHCKAGRGRSTTVVLCYLVQYKQMTPAEAYEHVRLRRPRVLLA 217
Query: 185 ASQWKAVLRYSEYQLNQRCTKLAPFIFVPQHWPICKNLQDGVGDQIMAPSEYDITFCGDS 364 ++Q +AV ++ YQL R K I + PI K + + I F + Sbjct: 218 SAQRQAVEQF--YQL--RVKKSGKSICLDS--PIMK-------PPLFLATRNLIAFDEKT 264
Query: 365 PVLVTLSDLEGYEERKELCSDNEFQGELGLVYKVGILTAKSVIGVAKASATLARLSYIWL 544 V+V+ SDLEGY+ + E+ LVY+V + A A SY+W+ Sbjct: 265 FVMVSKSDLEGYDADTLAVNVGSGLWEISLVYRVQF----------ASQAAFAGFSYLWV 314
>tr|A2ZA88|A2ZA88_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34652 PE=4 SV=1 Length = 362
Score = 114 bits (284), Expect = 8e-24 Identities = 75/180 (41%), Positives = 100/180 (55%) Frame = +2
Query: 5 RAVDFIHRNIERGKATYVHCKAGRGRSTTIVLCYLVKYRGMAPFDAFNHVRLKRPRIQLA 184 RA DFIHRN GK TYVHCKAGRGRSTT+VLCYLV+Y+ M P +A+ HVRL+RPR+ LA Sbjct: 158 RAADFIHRNALCGKLTYVHCKAGRGRSTTVVLCYLVQYKQMTPAEAYEHVRLRRPRVLLA 217
Query: 185 ASQWKAVLRYSEYQLNQRCTKLAPFIFVPQHWPICKNLQDGVGDQIMAPSEYDITFCGDS 364 ++Q +AV ++ YQL R K I + PI K + + I F + Sbjct: 218 SAQRQAVEQF--YQL--RVKKSGKSICLDS--PIMK-------PPLFLATRNLIAFDEKT 264
Query: 365 PVLVTLSDLEGYEERKELCSDNEFQGELGLVYKVGILTAKSVIGVAKASATLARLSYIWL 544 V+V+ SDLEGY+ + E+ LVY+V + A A SY+W+ Sbjct: 265 FVMVSKSDLEGYDADTLAVNVGSGLWEISLVYRVQF----------ASQAAFAGFSYLWV 314
>tr|B8A2Y2|B8A2Y2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 340
Score = 110 bits (274), Expect = 1e-22 Identities = 73/153 (47%), Positives = 84/153 (54%), Gaps = 20/153 (13%) Frame = +2
Query: 5 RAVDFIHRNIERGKATYVHCKAGRGRSTTIVLCYLVKYRGMAPFDAFNHVRLKRPRIQLA 184 +A+DFIHRN +G TYVHCKAGRGRSTTIVLCYL+KYR M P A +HVR RPR+ LA Sbjct: 140 QAIDFIHRNASQGGTTYVHCKAGRGRSTTIVLCYLIKYRNMTPEAALDHVRSIRPRVLLA 199
Query: 185 ASQWKAVLRYSEY---QLNQRCTKLAPFIFVPQHWPICKNLQDGVGD------------- 316 SQW AV + QL R T LA F+ + C N G D Sbjct: 200 PSQWHAVNSFGALTGGQLPVRSTNLACFLEAIEAG--CTN-TTGNDDYHVMEFDCEDSGL 256
Query: 317 ---QIMAPSEYDITFCG-DSPVLVTLSDLEGYE 403 QIM P T G VLVT +DLEGY+ Sbjct: 257 PLYQIMLPRPASPTGSGCTDAVLVTEADLEGYD 289
>tr|Q5JNL3|Q5JNL3_ORYSJ cDNA clone:J033022G13, full insert sequence OS=Oryza sativa subsp. japonica GN=P0638D12.17 PE=2 SV=1 Length = 341
Score = 109 bits (273), Expect = 1e-22 Identities = 66/148 (44%), Positives = 83/148 (56%), Gaps = 15/148 (10%) Frame = +2
Query: 5 RAVDFIHRNIERGKATYVHCKAGRGRSTTIVLCYLVKYRGMAPFDAFNHVRLKRPRIQLA 184 +A+DFIHRN G TYVHCKAGRGRSTTIVLCYL+KYR M+P A +HVR RPR+ LA Sbjct: 144 QAIDFIHRNASEGGITYVHCKAGRGRSTTIVLCYLIKYRSMSPEAALDHVRSIRPRVLLA 203
Query: 185 ASQWKAVLRYSEY---QLNQRCTKLAPFIFVPQHWPICKNLQDGVG------------DQ 319 SQW+AV +S +L + L F+ + D Q Sbjct: 204 PSQWQAVNVFSTLTTGRLPIQSKNLGHFLEAGDDCITNSEIDDYYSMELDYEDSGLPLCQ 263
Query: 320 IMAPSEYDITFCGDSPVLVTLSDLEGYE 403 +M P T C D+ VL+T +DLEGY+ Sbjct: 264 VMLPRPTSPTVCTDA-VLITEADLEGYD 290
>tr|A2WUW4|A2WUW4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03673 PE=4 SV=1 Length = 341
Score = 109 bits (273), Expect = 1e-22 Identities = 66/148 (44%), Positives = 83/148 (56%), Gaps = 15/148 (10%) Frame = +2
Query: 5 RAVDFIHRNIERGKATYVHCKAGRGRSTTIVLCYLVKYRGMAPFDAFNHVRLKRPRIQLA 184 +A+DFIHRN G TYVHCKAGRGRSTTIVLCYL+KYR M+P A +HVR RPR+ LA Sbjct: 144 QAIDFIHRNASEGGITYVHCKAGRGRSTTIVLCYLIKYRSMSPEAALDHVRSIRPRVLLA 203
Query: 185 ASQWKAVLRYSEY---QLNQRCTKLAPFIFVPQHWPICKNLQDGVG------------DQ 319 SQW+AV +S +L + L F+ + D Q Sbjct: 204 PSQWQAVNVFSTLTTGRLPIQSKNLGHFLEAGDDCITNSEIDDYYSMELDYEDSGLPLCQ 263
Query: 320 IMAPSEYDITFCGDSPVLVTLSDLEGYE 403 +M P T C D+ VL+T +DLEGY+ Sbjct: 264 VMLPRPTSPTVCTDA-VLITEADLEGYD 290
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