DK949280 |
Clone id |
TST38A01NGRL0005_J03 |
Library |
TST38 |
Length |
607 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_J03. 5' end sequence. |
Accession |
DK949280 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1653Contig1 |
Sequence |
GAAAAAATATGGCACACGGCAATGTTCATGTCATCAAAGCCCAGCATGAGTGGGATGCCA AGCTTGCGGAGGCACATGATGCAAAAAAGTGGTTGTAGTGGACTTTACAGCTTCTTGGTG TGGACCATGCAAGTTCATTGCTCCAGTTTTTGCTGAGTTGTCTGAGAAGTATCCCAACCT TGTCTTCTTAAAAGTTGACGTAGATGAGATGAATGCAATCAGCACTGCGTATGAGGTTCG AGCTATGCCCACCTTCTTATTCATTGAGAAAGGCGTTGTCATTGATAAGATTATTGGAGC GAACAAAGGTGAGCTCGAAGCTAAGGTTCGCCAATACTCTGAGATATGTGCTGCTGTGGC TGCTTGATAGCTGATTCACGCCCTGACAGAAGAGCAACAGTAATTTTATACACTACTAGT CTTTCATAGTTTGGTGTCTTTGTCATTTTAGACAAAGCCAGTGTTTAGTATTTTCTGGCA ATGATTTTCTTGGTGCCCTTTTTGTATATGAAGCTTATCGATTTTTGATGTGGTGAAGAG TTATCATGTGGTACTCAGTTAAGCGTGATAACAAACTTCCTAATTCAAAAAAAAAAAAAA AAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P29448 |
Definition |
sp|P29448|TRXH1_ARATH Thioredoxin H-type 1 OS=Arabidopsis thaliana |
Align length |
79 |
Score (bit) |
107.0 |
E-value |
3.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NMW7 |
Definition |
tr|A9NMW7|A9NMW7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
76 |
Score (bit) |
117.0 |
E-value |
5.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949280|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_J03, 5' (586 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NMW7|A9NMW7_PICSI Putative uncharacterized protein OS=Picea... 117 5e-30 tr|A9SJH2|A9SJH2_PHYPA Predicted protein OS=Physcomitrella paten... 114 6e-28 tr|A9NQW4|A9NQW4_PICSI Putative uncharacterized protein OS=Picea... 114 2e-27 tr|A9RIX6|A9RIX6_PHYPA Predicted protein (Fragment) OS=Physcomit... 112 2e-26 tr|A9NZI2|A9NZI2_PICSI Putative uncharacterized protein OS=Picea... 108 3e-26 tr|A9RQ57|A9RQ57_PHYPA Predicted protein OS=Physcomitrella paten... 113 4e-26 tr|Q9SWG4|Q9SWG4_LOLPR Thioredoxin-like protein OS=Lolium perenn... 102 1e-23 tr|Q9S753|Q9S753_9POAL Thioredoxin-like protein OS=Phalaris coer... 102 1e-23 tr|Q8H6X5|Q8H6X5_MAIZE Thioredoxin h-like protein OS=Zea mays PE... 102 4e-23 tr|Q8GZR4|Q8GZR4_HORVD Thioredoxin h-like protein OS=Hordeum vul... 102 4e-23 tr|Q84X91|Q84X91_9POAL Thioredoxin h OS=Leymus chinensis PE=4 SV=1 102 4e-23 tr|B5UB76|B5UB76_HORBU Thioredoxin h-like protein OS=Hordeum bul... 102 4e-23 tr|A6YT25|A6YT25_HORVU H-type thioredoxin OS=Hordeum vulgare GN=... 102 4e-23 tr|Q9SWG6|Q9SWG6_HORBU Thioredoxin-like protein OS=Hordeum bulbo... 100 4e-23 tr|A9PA11|A9PA11_POPTR Putative uncharacterized protein OS=Popul... 102 5e-23 tr|B6SUA0|B6SUA0_MAIZE Thioredoxin H-type OS=Zea mays PE=2 SV=1 102 5e-23 tr|Q5ZF48|Q5ZF48_PLAMJ Thioredoxin 1 OS=Plantago major GN=trx1 P... 110 6e-23 tr|A2ZPP5|A2ZPP5_ORYSJ Putative uncharacterized protein OS=Oryza... 100 8e-23 tr|Q9AS75|Q9AS75_ORYSJ cDNA clone:J033143D23, full insert sequen... 100 9e-23 tr|B8ADG2|B8ADG2_ORYSI Putative uncharacterized protein OS=Oryza... 100 1e-22 tr|B6T2S8|B6T2S8_MAIZE Thioredoxin H-type OS=Zea mays PE=2 SV=1 100 1e-22 tr|B6SMZ1|B6SMZ1_MAIZE Thioredoxin H-type OS=Zea mays PE=2 SV=1 100 1e-22 tr|Q8H6X4|Q8H6X4_ORYSA Thioredoxin h-like protein OS=Oryza sativ... 100 1e-22 tr|Q0DKF1|Q0DKF1_ORYSJ Os05g0169000 protein OS=Oryza sativa subs... 100 1e-22 tr|A2Y0T3|A2Y0T3_ORYSI Putative uncharacterized protein OS=Oryza... 100 1e-22 tr|B6EAX5|B6EAX5_SALMI TRX OS=Salvia miltiorrhiza GN=Trx PE=4 SV=1 108 3e-22 tr|A5ANU2|A5ANU2_VITVI Putative uncharacterized protein OS=Vitis... 99 3e-22 tr|A7PTJ8|A7PTJ8_VITVI Chromosome chr8 scaffold_29, whole genome... 99 3e-22 tr|A9SY89|A9SY89_PHYPA Predicted protein (Fragment) OS=Physcomit... 105 3e-22 tr|Q9SWG5|Q9SWG5_SECCE Thioredoxin-like protein OS=Secale cereal... 99 3e-22
>tr|A9NMW7|A9NMW7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 119
Score = 117 bits (292), Expect(2) = 5e-30 Identities = 54/76 (71%), Positives = 63/76 (82%) Frame = +2
Query: 101 DFTASWCGPCKFIAPVFAELSEKYPNLVFLKVDVDEMNAISTAYEVRAMPTFLFIEKGVV 280 DFTASWCGPCK IAP +AELSEKYP LVFLKVDVDEM +S ++VRAMPTF+FI+ G Sbjct: 34 DFTASWCGPCKMIAPFYAELSEKYPQLVFLKVDVDEMAEVSAEWDVRAMPTFIFIKDGKQ 93
Query: 281 IDKIIGANKGELEAKV 328 IDK++G N+ ELE KV Sbjct: 94 IDKLVGLNQPELEKKV 109
Score = 38.5 bits (88), Expect(2) = 5e-30 Identities = 14/21 (66%), Positives = 19/21 (90%) Frame = +3
Query: 12 AHGNVHVIKAQHEWDAKLAEA 74 AHGN+HV+ ++HEWDAK+ EA Sbjct: 4 AHGNIHVMTSKHEWDAKVFEA 24
>tr|A9SJH2|A9SJH2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_185663 PE=4 SV=1 Length = 117
Score = 114 bits (286), Expect(2) = 6e-28 Identities = 48/82 (58%), Positives = 68/82 (82%) Frame = +2
Query: 101 DFTASWCGPCKFIAPVFAELSEKYPNLVFLKVDVDEMNAISTAYEVRAMPTFLFIEKGVV 280 DFTA+WCGPC+ +AP+F ELS+KY N++FLKVDVDE+ +++ +EVRAMPTF+FI+ G Sbjct: 32 DFTATWCGPCRLMAPIFVELSKKYENIIFLKVDVDEVKDVTSQWEVRAMPTFIFIKDGKS 91
Query: 281 IDKIIGANKGELEAKVRQYSEI 346 I K++GANK ELE K +Q++ + Sbjct: 92 IHKVVGANKDELEKKCQQFASL 113
Score = 33.9 bits (76), Expect(2) = 6e-28 Identities = 16/27 (59%), Positives = 16/27 (59%) Frame = +3
Query: 9 MAHGNVHVIKAQHEWDAKLAEAHDAKK 89 M HG VHVI WDAKLAEA K Sbjct: 1 MDHGKVHVINNSAAWDAKLAEATSTGK 27
>tr|A9NQW4|A9NQW4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 136
Score = 114 bits (286), Expect(2) = 2e-27 Identities = 52/80 (65%), Positives = 64/80 (80%) Frame = +2
Query: 101 DFTASWCGPCKFIAPVFAELSEKYPNLVFLKVDVDEMNAISTAYEVRAMPTFLFIEKGVV 280 DFTA+WCGPCK I P ++ELSEKYP LVFLKVDV+EM +S ++V+AMPTF FI+ G Sbjct: 53 DFTAAWCGPCKMITPFYSELSEKYPQLVFLKVDVEEMPELSATWDVQAMPTFFFIKDGKQ 112
Query: 281 IDKIIGANKGELEAKVRQYS 340 IDK++GANK ELE KV Y+ Sbjct: 113 IDKLVGANKPELEKKVISYA 132
Score = 32.0 bits (71), Expect(2) = 2e-27 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +3
Query: 12 AHGNVHVIKAQHEWDAKLAEAHDAKK 89 +HGNV +I A EW+A++ EA+ K Sbjct: 23 SHGNVRIITANQEWEAEILEANTTGK 48
>tr|A9RIX6|A9RIX6_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_114968 PE=4 SV=1 Length = 111
Score = 112 bits (279), Expect(2) = 2e-26 Identities = 48/80 (60%), Positives = 65/80 (81%) Frame = +2
Query: 101 DFTASWCGPCKFIAPVFAELSEKYPNLVFLKVDVDEMNAISTAYEVRAMPTFLFIEKGVV 280 DFTASWCGPCK +APVFAELS ++ L+F+KVDVDE+ ++ Y+VRAMPTFLFI+ G Sbjct: 29 DFTASWCGPCKLMAPVFAELSRRFGQLIFVKVDVDEVQEVAAEYDVRAMPTFLFIKDGQQ 88
Query: 281 IDKIIGANKGELEAKVRQYS 340 IDK++GA++ +LE K +Y+ Sbjct: 89 IDKVVGADRNDLERKCNKYA 108
Score = 31.6 bits (70), Expect(2) = 2e-26 Identities = 11/24 (45%), Positives = 19/24 (79%) Frame = +3
Query: 18 GNVHVIKAQHEWDAKLAEAHDAKK 89 GNVHV+ ++ W +K++EA+ A+K Sbjct: 1 GNVHVVNSRRAWQSKVSEANAARK 24
>tr|A9NZI2|A9NZI2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 145
Score = 108 bits (270), Expect(2) = 3e-26 Identities = 47/80 (58%), Positives = 63/80 (78%) Frame = +2
Query: 101 DFTASWCGPCKFIAPVFAELSEKYPNLVFLKVDVDEMNAISTAYEVRAMPTFLFIEKGVV 280 DF+A+WCGPC IAP + ELS+K+P LVFLKVDVDE+ +S + V+AMPTF+FI+ G Sbjct: 57 DFSATWCGPCNMIAPFYTELSQKHPQLVFLKVDVDELRELSETWNVQAMPTFVFIKNGKQ 116
Query: 281 IDKIIGANKGELEAKVRQYS 340 ID ++GA+K ELE KV+ Y+ Sbjct: 117 IDTLVGADKSELEKKVKSYA 136
Score = 34.3 bits (77), Expect(2) = 3e-26 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +3
Query: 12 AHGNVHVIKAQHEWDAKLAEAHDAKK 89 +HG+VH+I EW+AK++EA+ K Sbjct: 27 SHGSVHIINTSQEWEAKISEANTTGK 52
>tr|A9RQ57|A9RQ57_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_204594 PE=4 SV=1 Length = 121
Score = 113 bits (282), Expect(2) = 4e-26 Identities = 49/80 (61%), Positives = 66/80 (82%) Frame = +2
Query: 101 DFTASWCGPCKFIAPVFAELSEKYPNLVFLKVDVDEMNAISTAYEVRAMPTFLFIEKGVV 280 DFTA+WCGPC+ +AP+FA+LS+K+ L+FLKVDVD + ++ +EVRAMPTFLFI+ G + Sbjct: 34 DFTATWCGPCRMMAPIFADLSKKFEKLLFLKVDVDAVQEVTQEWEVRAMPTFLFIKDGKL 93
Query: 281 IDKIIGANKGELEAKVRQYS 340 +DKI+GANK ELE K QY+ Sbjct: 94 LDKIVGANKDELEKKCNQYA 113
Score = 29.3 bits (64), Expect(2) = 4e-26 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +3
Query: 15 HGNVHVIKAQHEWDAKLAEAHDAKK 89 HGN+H++ EW KL EA + K Sbjct: 5 HGNIHIVNNTVEWKTKLDEATSSGK 29
>tr|Q9SWG4|Q9SWG4_LOLPR Thioredoxin-like protein OS=Lolium perenne GN=Trx PE=2 SV=1 Length = 131
Score = 102 bits (254), Expect(2) = 1e-23 Identities = 42/77 (54%), Positives = 63/77 (81%) Frame = +2
Query: 101 DFTASWCGPCKFIAPVFAELSEKYPNLVFLKVDVDEMNAISTAYEVRAMPTFLFIEKGVV 280 +F+ASWCGPC+ IAPV+AE+S+ YP L+FL +DVD++ S+ +++RA PTF F++ G + Sbjct: 49 NFSASWCGPCRVIAPVYAEMSKTYPQLMFLTIDVDDLMDFSSTWDIRATPTFFFLKNGQL 108
Query: 281 IDKIIGANKGELEAKVR 331 IDK++GAN+ ELE KV+ Sbjct: 109 IDKLVGANRPELEKKVQ 125
Score = 31.6 bits (70), Expect(2) = 1e-23 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +3
Query: 18 GNVHVIKAQHEWDAKLAEAH 77 GNVHVI + +WD K+AEA+ Sbjct: 21 GNVHVITTKEDWDQKVAEAN 40
>tr|Q9S753|Q9S753_9POAL Thioredoxin-like protein OS=Phalaris coerulescens GN=Trx PE=2 SV=1 Length = 131
Score = 102 bits (253), Expect(2) = 1e-23 Identities = 43/77 (55%), Positives = 62/77 (80%) Frame = +2
Query: 101 DFTASWCGPCKFIAPVFAELSEKYPNLVFLKVDVDEMNAISTAYEVRAMPTFLFIEKGVV 280 +F+ASWCGPC+ IAPV+AE+S+ YP L+FL +DVD++ S+ +++RA PTF F++ G Sbjct: 49 NFSASWCGPCRVIAPVYAEMSKTYPQLMFLTIDVDDLVDFSSTWDIRATPTFFFLKNGQQ 108
Query: 281 IDKIIGANKGELEAKVR 331 IDK++GANK ELE KV+ Sbjct: 109 IDKLVGANKPELEKKVQ 125
Score = 32.0 bits (71), Expect(2) = 1e-23 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +3
Query: 18 GNVHVIKAQHEWDAKLAEAH 77 GNVHVI + +WD K+AEA+ Sbjct: 21 GNVHVITTKEDWDQKIAEAN 40
>tr|Q8H6X5|Q8H6X5_MAIZE Thioredoxin h-like protein OS=Zea mays PE=2 SV=1 Length = 133
Score = 102 bits (254), Expect(2) = 4e-23 Identities = 43/76 (56%), Positives = 62/76 (81%) Frame = +2
Query: 101 DFTASWCGPCKFIAPVFAELSEKYPNLVFLKVDVDEMNAISTAYEVRAMPTFLFIEKGVV 280 +F+ASWCGPC+ IAPV+AE+S+ YP L+FL +DVD++ S+++++RA PTF F++ G Sbjct: 49 NFSASWCGPCRVIAPVYAEMSKTYPQLMFLTIDVDDLMDFSSSWDIRATPTFFFLKNGQQ 108
Query: 281 IDKIIGANKGELEAKV 328 IDK++GANK ELE KV Sbjct: 109 IDKLVGANKPELEKKV 124
Score = 30.0 bits (66), Expect(2) = 4e-23 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +3
Query: 18 GNVHVIKAQHEWDAKLAEAH 77 GNVH+I + WD K+AEA+ Sbjct: 21 GNVHIITSNEGWDQKIAEAN 40
>tr|Q8GZR4|Q8GZR4_HORVD Thioredoxin h-like protein OS=Hordeum vulgare var. distichum PE=2 SV=1 Length = 131
Score = 102 bits (254), Expect(2) = 4e-23 Identities = 43/77 (55%), Positives = 62/77 (80%) Frame = +2
Query: 101 DFTASWCGPCKFIAPVFAELSEKYPNLVFLKVDVDEMNAISTAYEVRAMPTFLFIEKGVV 280 +F+ASWCGPC+ IAPV+AE+S+ YP L+FL +DVD++ S+ +++RA PTF F++ G Sbjct: 49 NFSASWCGPCRVIAPVYAEMSKTYPQLMFLTIDVDDLMDFSSTWDIRATPTFFFLKNGQQ 108
Query: 281 IDKIIGANKGELEAKVR 331 IDK++GANK ELE KV+ Sbjct: 109 IDKLVGANKPELEKKVQ 125
Score = 30.0 bits (66), Expect(2) = 4e-23 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +3
Query: 18 GNVHVIKAQHEWDAKLAEAH 77 GNVHVI + +WD K+ EA+ Sbjct: 21 GNVHVITTKEDWDQKIEEAN 40
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