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NBDC - LSDB Archive
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DK949307
Clone id TST38A01NGRL0005_K06
Library
Length 724
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_K06. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
ATAAGCCATGGCTGCCCTCGCGGGTTCCTCGCTCTTGACCAGGCCGGAGATCTTTGGGCA
GGCCGTCGCCTCCTCTTCCGCCTCCTCCGCTTCTTCTCCGTCTTCTGCTACTCCTCGTAT
CGTCTCCCTCCTCGGCAAGAAGAAGCCCAAATCTTCCAAGGCCGCCCCCAAGGCCCCTGC
CAACGAGGAGCTGGCCAAGTGGTATGGTCCTGCCCGCAGAATTTACCTCCCTGAAGGTTT
GCTTGACAGATCAGAAGTGCCTGCATATCTCACCGGAGAAGTTCCCGGAGACTATGGATT
TGACCCCTTCGGTTTGAGCAAGAAACCTGCAGACTTCGACAAGTATCAAGCTTATGAGCT
CATCCACGCCAGGTGGGCCATGCTTGGAGCCGCTGGATTTATCCTTCCCGAGGCCTTTAA
CAAGTATGGTGCAGCTTGCGGGCCTGAAGCTGTGTGGTTCAAGACCGGTGCCCTTCTCCT
GGACGGAGGATCCATCGAGTATTTTGGCGCCACTGTGCCAATCAACCTTGCCGTTGCTGT
GATTGCAGAAGTGATCCTTGTTGGTGGTGCCGAATACTACAGAGCCTCCAACCTACAGGG
CTTCGATAGACTTCACCCTGGTGGACCCTTCGATCCCTTGGGCTTGGCAAAGGACCCCGA
TCAGTTTGCTCTCCTGAAGGTGAAGGAGATTAAGAATGGAAGACTGGCAATGTTCTCGAT
GCTC
■■Homology search results ■■ -
sp_hit_id Q9XF89
Definition sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana
Align length 182
Score (bit) 277.0
E-value 5.0e-74
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949307|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_K06, 5'
         (724 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...   277   5e-74
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...   159   1e-38
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...   156   1e-37
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   154   4e-37
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   154   6e-37
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   154   6e-37
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...   153   1e-36
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   152   2e-36
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   151   3e-36
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   150   5e-36
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   150   7e-36
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   150   9e-36
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   149   1e-35
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   149   1e-35
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   149   1e-35
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   149   1e-35
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   149   1e-35
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   149   2e-35
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   149   2e-35
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   149   2e-35
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   149   2e-35
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   148   3e-35
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   148   3e-35
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   148   3e-35
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   148   3e-35
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   148   3e-35
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   148   3e-35
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   147   4e-35
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   147   4e-35
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   147   4e-35

>sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1
          Length = 280

 Score =  277 bits (708), Expect = 5e-74
 Identities = 132/182 (72%), Positives = 148/182 (81%), Gaps = 1/182 (0%)
 Frame = +2

Query: 182 NEELAKWYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYEL 361
           ++ELAKWYGP RRI+LP+GLLDRSE+P YL GEV GDYG+DPFGL KKP +F KYQA+EL
Sbjct: 56  SDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFEL 115

Query: 362 IHARWAMLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPINXXXXX 541
           IHARWAMLGAAGFI+PEA NKYGA CGPEAVWFKTGALLLDG ++ YFG  +PIN     
Sbjct: 116 IHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAV 175

Query: 542 XXXXXXXXXXEYYRASNLQGF-DRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFS 718
                     EYYR +N   F D+LHPGGPFDPLGLAKDP+Q ALLKVKEIKNGRLAMF+
Sbjct: 176 VAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFA 235

Query: 719 ML 724
           ML
Sbjct: 236 ML 237


>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1
          Length = 253

 Score =  159 bits (403), Expect = 1e-38
 Identities = 89/184 (48%), Positives = 106/184 (57%), Gaps = 8/184 (4%)
 Frame = +2

Query: 197 KWYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARW 376
           ++YGP R  +L  G    ++ P YLTGE PGDYG+D  GLS  P  F +Y+  ELIHARW
Sbjct: 32  EFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARW 89

Query: 377 AMLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPI---NXXXXXXX 547
           A+LGA G + PE  ++Y      E VWFK GA +   G + Y G    I   +       
Sbjct: 90  ALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAV 149

Query: 548 XXXXXXXXEYYRASN-----LQGFDRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAM 712
                   E YRA+      L   D L+PGGPFDPLGLA DPD FA LKVKEIKNGRLAM
Sbjct: 150 QVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAM 209

Query: 713 FSML 724
           FS L
Sbjct: 210 FSCL 213


>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1
          Length = 256

 Score =  156 bits (394), Expect = 1e-37
 Identities = 87/180 (48%), Positives = 103/180 (57%), Gaps = 6/180 (3%)
 Frame = +2

Query: 197 KWYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARW 376
           +WYGP R  +L       +  PAYLTGE PGDYG+D  GLS  P  F KY+  E+IHARW
Sbjct: 38  EWYGPDRAKWLGPF---STNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARW 94

Query: 377 AMLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPI---NXXXXXXX 547
           A+LGA G + PE  + Y      E VWFK GA +   G ++Y G+   I   N       
Sbjct: 95  ALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAV 154

Query: 548 XXXXXXXXEYYRASN---LQGFDRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFS 718
                   E YR +     +G D L+PG  FDPLGLA DPD FA LKVKEIKNGRLAMFS
Sbjct: 155 QVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFS 214


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  154 bits (390), Expect = 4e-37
 Identities = 88/180 (48%), Positives = 104/180 (57%), Gaps = 6/180 (3%)
 Frame = +2

Query: 200 WYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARWA 379
           WYGP R  YL        ++P+YLTGE PGDYG+D  GLS  P  F K +  E+IH RWA
Sbjct: 49  WYGPDRPKYLGPF---SDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105

Query: 380 MLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPI---NXXXXXXXX 550
           MLGA G + PE  +K G   G EAVWFK G+ +   G ++Y G    I   +        
Sbjct: 106 MLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQ 164

Query: 551 XXXXXXXEYYRASN---LQGFDRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 721
                  E YR       +G D ++PGG FDPLGLA DPD FA LKVKEIKNGRLAMFSM
Sbjct: 165 VVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSM 224


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  154 bits (388), Expect = 6e-37
 Identities = 86/180 (47%), Positives = 105/180 (58%), Gaps = 6/180 (3%)
 Frame = +2

Query: 200 WYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARWA 379
           WYGP R  YL        + P+YLTGE PGDYG+D  GLS  P  F + +  E+IH+RWA
Sbjct: 47  WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103

Query: 380 MLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPI---NXXXXXXXX 550
           MLGA G + PE  +K G   G EAVWFK GA +   G ++Y G    +   +        
Sbjct: 104 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQ 162

Query: 551 XXXXXXXEYYRASN---LQGFDRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 721
                  E YR       +G D+++PGG FDPLGLA DPD FA LKVKE+KNGRLAMFSM
Sbjct: 163 VVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSM 222


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  154 bits (388), Expect = 6e-37
 Identities = 86/180 (47%), Positives = 105/180 (58%), Gaps = 6/180 (3%)
 Frame = +2

Query: 200 WYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARWA 379
           WYGP R  YL        + P+YLTGE PGDYG+D  GLS  P  F + +  E+IH+RWA
Sbjct: 47  WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103

Query: 380 MLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPI---NXXXXXXXX 550
           MLGA G + PE  +K G   G EAVWFK GA +   G ++Y G    +   +        
Sbjct: 104 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQ 162

Query: 551 XXXXXXXEYYRASN---LQGFDRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 721
                  E YR       +G D+++PGG FDPLGLA DPD FA LKVKE+KNGRLAMFSM
Sbjct: 163 VVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSM 222


>sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1
           PE=3 SV=1
          Length = 253

 Score =  153 bits (386), Expect = 1e-36
 Identities = 90/181 (49%), Positives = 104/181 (57%), Gaps = 6/181 (3%)
 Frame = +2

Query: 197 KWYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARW 376
           ++YGP R  +L  G    +  PAYLTGE PGDYG+D  GLS  P  F +Y+  ELIHARW
Sbjct: 35  EFYGPNRAKWL--GPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARW 92

Query: 377 AMLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPI---NXXXXXXX 547
           AMLGA G   PE   K G   G EAVWFK GA +   G ++Y G    +   N       
Sbjct: 93  AMLGALGCQTPELLAKSGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAV 151

Query: 548 XXXXXXXXEYYRASN---LQGFDRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFS 718
                   E YR +     +G D L+PG  FDPLGLA DPD FA LKVKEIKNGRLA FS
Sbjct: 152 QVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFS 211

Query: 719 M 721
           M
Sbjct: 212 M 212


>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member
           1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1
          Length = 278

 Score =  152 bits (383), Expect = 2e-36
 Identities = 88/180 (48%), Positives = 105/180 (58%), Gaps = 6/180 (3%)
 Frame = +2

Query: 200 WYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARWA 379
           WYGP R +YL        E P+YLTGE PGDYG+D  GLS  P  F K +  E+IH+RWA
Sbjct: 62  WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 118

Query: 380 MLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPI---NXXXXXXXX 550
           MLGA G + PE   + G   G EAVWFK GA +   G ++Y G+   I   +        
Sbjct: 119 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQ 177

Query: 551 XXXXXXXEYYRASN---LQGFDRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 721
                  E YR +     +  D ++PGG FDPLGLA DPD FA LKVKEIKNGRLAMFSM
Sbjct: 178 VILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSM 237


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
           chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
          Length = 265

 Score =  151 bits (382), Expect = 3e-36
 Identities = 87/180 (48%), Positives = 103/180 (57%), Gaps = 6/180 (3%)
 Frame = +2

Query: 200 WYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARWA 379
           WYGP R  YL        ++P+YLTGE PGDYG+D  GLS  P  F + +  E+IH+RWA
Sbjct: 49  WYGPDRPKYLGPF---SEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 105

Query: 380 MLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPI---NXXXXXXXX 550
           MLGA G   PE   K G   G EAVWFK G+ +   G ++Y G    I   +        
Sbjct: 106 MLGALGCTFPELLEKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQ 164

Query: 551 XXXXXXXEYYRASN---LQGFDRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 721
                  E YR       +G D L+PGG FDPLGLA DPD FA LKVKE+KNGRLAMFSM
Sbjct: 165 VVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSM 224


>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member
           1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1
          Length = 274

 Score =  150 bits (380), Expect = 5e-36
 Identities = 84/180 (46%), Positives = 102/180 (56%), Gaps = 6/180 (3%)
 Frame = +2

Query: 200 WYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARWA 379
           WYGP R +YL        E P+YLTGE PGDYG+D  GLS  P +F K +  E+IH RWA
Sbjct: 58  WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWA 114

Query: 380 MLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPINXXXXXXXXXXX 559
           MLGA G + PE   + G   G EAVWFK GA +   G ++Y G    ++           
Sbjct: 115 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQ 173

Query: 560 XXXXEYYRASNLQG------FDRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 721
                      + G       D ++PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMFSM
Sbjct: 174 VILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSM 233
tr_hit_id A9U5B1
Definition tr|A9U5B1|A9U5B1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 186
Score (bit) 302.0
E-value 1.0e-80
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949307|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_K06, 5'
         (724 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9U5B1|A9U5B1_PHYPA Predicted protein OS=Physcomitrella paten...   302   1e-80
tr|A9NKM0|A9NKM0_PICSI Putative uncharacterized protein OS=Picea...   300   8e-80
tr|A9NR97|A9NR97_PICSI Putative uncharacterized protein OS=Picea...   297   4e-79
tr|Q41040|Q41040_PINSY Lhcb5 protein OS=Pinus sylvestris GN=Lhcb...   296   7e-79
tr|A9NSH6|A9NSH6_PICSI Putative uncharacterized protein OS=Picea...   296   9e-79
tr|A9RFL7|A9RFL7_PHYPA Predicted protein (Fragment) OS=Physcomit...   293   6e-78
tr|A5B523|A5B523_VITVI Putative uncharacterized protein (Chromos...   290   7e-77
tr|A9PJY2|A9PJY2_POPJC Putative uncharacterized protein OS=Popul...   289   1e-76
tr|A9PGZ3|A9PGZ3_POPTR Putative uncharacterized protein OS=Popul...   289   1e-76
tr|Q0PWS5|Q0PWS5_TOBAC Chloroplast pigment-binding protein CP26 ...   287   6e-76
tr|Q00321|Q00321_SOLLC Type I (26 kD) CP29 polypeptide OS=Solanu...   286   1e-75
tr|A2ZD01|A2ZD01_ORYSI Putative uncharacterized protein OS=Oryza...   284   5e-75
tr|Q53N83|Q53N83_ORYSJ Chlorophyll A-B binding protein, expresse...   283   6e-75
tr|Q40039|Q40039_HORVU Precursor of CP29, core chlorophyll a/b b...   283   1e-74
tr|Q41747|Q41747_MAIZE Chlorophyll a/b-binding apoprotein CP26 O...   280   9e-74
tr|B4FL55|B4FL55_MAIZE Putative uncharacterized protein OS=Zea m...   280   9e-74
tr|Q41746|Q41746_MAIZE Chlorophyll a/b-binding apoprotein CP26 O...   278   2e-73
tr|B7SAW2|B7SAW2_9POAL Chloroplast chlorophyll a/b binding prote...   276   1e-72
tr|Q39286|Q39286_BRAJU Chlorophyll a/b-binding protein CP26 in P...   273   1e-71
tr|B7SB29|B7SB29_9POAL LHCB5 OS=Phyllostachys edulis PE=2 SV=1        265   2e-69
tr|A6MZY2|A6MZY2_ORYSI Chloroplast chlorophyll a-b binding prote...   241   4e-62
tr|Q53N81|Q53N81_ORYSJ Chlorophyll A-B binding protein, expresse...   214   4e-54
tr|Q946F1|Q946F1_9ASTR ASCAB9 (Fragment) OS=Centromadia pungens ...   192   2e-47
tr|Q946G0|Q946G0_9ASTR ASCAB9-A (Fragment) OS=Dubautia laxa GN=A...   191   4e-47
tr|Q946F8|Q946F8_9ASTR ASCAB9-A (Fragment) OS=Dubautia sherffian...   191   4e-47
tr|Q946F7|Q946F7_ARGSA ASCAB9-B (Fragment) OS=Argyroxiphium sand...   191   4e-47
tr|Q946F6|Q946F6_ARGSA ASCAB9-C (Fragment) OS=Argyroxiphium sand...   191   4e-47
tr|Q946F5|Q946F5_9ASTR ASCAB9-C (Fragment) OS=Dubautia latifolia...   191   4e-47
tr|Q946F4|Q946F4_9ASTR ASCAB9-C (Fragment) OS=Dubautia laxa GN=A...   191   4e-47
tr|Q946F3|Q946F3_9ASTR ASCAB9-C (Fragment) OS=Dubautia scabra GN...   191   4e-47

>tr|A9U5B1|A9U5B1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_156993 PE=4 SV=1
          Length = 270

 Score =  302 bits (774), Expect = 1e-80
 Identities = 146/186 (78%), Positives = 157/186 (84%), Gaps = 5/186 (2%)
 Frame = +2

Query: 182 NEELAKWYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYEL 361
           NEELAKWYGP RRIYLPEGLL + E+PAYLTGEVPGDYG+DPFGLSKKP DFD+YQAYEL
Sbjct: 42  NEELAKWYGPDRRIYLPEGLLAKDEIPAYLTGEVPGDYGYDPFGLSKKPEDFDRYQAYEL 101

Query: 362 IHARWAMLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPINXXXXX 541
           IHARWAMLGAAGF+LPEAFNK+GA CGPEAVW+KTGALLL+G SI+YFGATVPIN     
Sbjct: 102 IHARWAMLGAAGFVLPEAFNKFGAVCGPEAVWWKTGALLLEGDSIKYFGATVPINLAAAV 161

Query: 542 XXXXXXXXXXEYYRASN-----LQGFDRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRL 706
                     EYYR++N     LQ  DRLHPGG FDPLGLAKDPDQFALLKVKEIKNGRL
Sbjct: 162 IAEVILVGGAEYYRSTNKDVYGLQDLDRLHPGGAFDPLGLAKDPDQFALLKVKEIKNGRL 221

Query: 707 AMFSML 724
           AMFSML
Sbjct: 222 AMFSML 227


>tr|A9NKM0|A9NKM0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 303

 Score =  300 bits (767), Expect = 8e-80
 Identities = 142/182 (78%), Positives = 157/182 (86%), Gaps = 1/182 (0%)
 Frame = +2

Query: 182 NEELAKWYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYEL 361
           +EELAKWYGP RRI+LPEGLLDR+++P YL GEVPGDYG+DPFGLSKKP +FDKYQAYEL
Sbjct: 79  SEELAKWYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLSKKPENFDKYQAYEL 138

Query: 362 IHARWAMLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPINXXXXX 541
           IHARWAMLGAAGFI+PEAFNK+GA CGPEAVWFKTGALLLDGG++ YFGA++PIN     
Sbjct: 139 IHARWAMLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPINLIAAV 198

Query: 542 XXXXXXXXXXEYYRASNLQGF-DRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFS 718
                     EYYRA+N   F D+LHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFS
Sbjct: 199 VAEVILVGGAEYYRATNGLDFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFS 258

Query: 719 ML 724
           ML
Sbjct: 259 ML 260


>tr|A9NR97|A9NR97_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 303

 Score =  297 bits (761), Expect = 4e-79
 Identities = 141/182 (77%), Positives = 156/182 (85%), Gaps = 1/182 (0%)
 Frame = +2

Query: 182 NEELAKWYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYEL 361
           +EELAKWYGP RRI+LPEGLLDR+++P YL GEVPGDYG+DPFGL KKP +FDKYQAYEL
Sbjct: 79  SEELAKWYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLIKKPENFDKYQAYEL 138

Query: 362 IHARWAMLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPINXXXXX 541
           IHARWAMLGAAGFI+PEAFNK+GA CGPEAVWFKTGALLLDGG++ YFGA++PIN     
Sbjct: 139 IHARWAMLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPINLIAAV 198

Query: 542 XXXXXXXXXXEYYRASNLQGF-DRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFS 718
                     EYYRA+N   F D+LHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFS
Sbjct: 199 VAEVILVGGAEYYRATNGLDFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFS 258

Query: 719 ML 724
           ML
Sbjct: 259 ML 260


>tr|Q41040|Q41040_PINSY Lhcb5 protein OS=Pinus sylvestris GN=Lhcb5*1
           PE=2 SV=1
          Length = 302

 Score =  296 bits (759), Expect = 7e-79
 Identities = 140/181 (77%), Positives = 154/181 (85%), Gaps = 1/181 (0%)
 Frame = +2

Query: 185 EELAKWYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELI 364
           EELAKWYGP RRI+LPEGLLDR ++P YL GEVPGDYG+DPFGL +KP +FDKYQAYELI
Sbjct: 79  EELAKWYGPDRRIFLPEGLLDRDDIPEYLNGEVPGDYGYDPFGLGRKPENFDKYQAYELI 138

Query: 365 HARWAMLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPINXXXXXX 544
           HARWAMLGAAGFI+PEAFNK+GA CGPEAVWFKTGALLLDGG++ YFGA++PIN      
Sbjct: 139 HARWAMLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPINLIAAVV 198

Query: 545 XXXXXXXXXEYYRASNLQGF-DRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 721
                    EYYRA+N   F D+LHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM
Sbjct: 199 AEVVLVGGAEYYRATNGLNFDDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 258

Query: 722 L 724
           L
Sbjct: 259 L 259


>tr|A9NSH6|A9NSH6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 303

 Score =  296 bits (758), Expect = 9e-79
 Identities = 141/182 (77%), Positives = 156/182 (85%), Gaps = 1/182 (0%)
 Frame = +2

Query: 182 NEELAKWYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYEL 361
           +EELAKWYGP RRI+LPEGLLDR+++P YL GEVPGDYG+DPFGLSKKP +FDKYQAYEL
Sbjct: 79  SEELAKWYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLSKKPENFDKYQAYEL 138

Query: 362 IHARWAMLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPINXXXXX 541
           IHARWAMLGAAGFI+PEAFNK+GA CGPEAVWFKTGALLLDGG++ YFGA++ IN     
Sbjct: 139 IHARWAMLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIHINLIAAV 198

Query: 542 XXXXXXXXXXEYYRASNLQGF-DRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFS 718
                     EYYRA+N   F D+LHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFS
Sbjct: 199 VAEVILVGGAEYYRATNGLDFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFS 258

Query: 719 ML 724
           ML
Sbjct: 259 ML 260


>tr|A9RFL7|A9RFL7_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_52279 PE=4 SV=1
          Length = 227

 Score =  293 bits (751), Expect = 6e-78
 Identities = 141/184 (76%), Positives = 153/184 (83%), Gaps = 4/184 (2%)
 Frame = +2

Query: 185 EELAKWYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELI 364
           EELAKWYGP RRIYLPEGLL + E+P YLTGEVPGDYG+DPFGLSKKP DFD+YQAYELI
Sbjct: 1   EELAKWYGPDRRIYLPEGLLAKDEIPEYLTGEVPGDYGYDPFGLSKKPEDFDRYQAYELI 60

Query: 365 HARWAMLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPINXXXXXX 544
           HARWAMLGAAGF+LPEAFNK+GA CGPEAVW+KTGALLL+G SI+YFGATVP+N      
Sbjct: 61  HARWAMLGAAGFVLPEAFNKFGAVCGPEAVWWKTGALLLEGDSIKYFGATVPLNLAAAVI 120

Query: 545 XXXXXXXXXEYYRASNL----QGFDRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAM 712
                    EYYR++N        DRLHPGG FDPLGLAKDPDQFALLKVKEIKNGRLAM
Sbjct: 121 AEVILVGGAEYYRSTNKSPLGSDLDRLHPGGAFDPLGLAKDPDQFALLKVKEIKNGRLAM 180

Query: 713 FSML 724
           FSML
Sbjct: 181 FSML 184


>tr|A5B523|A5B523_VITVI Putative uncharacterized protein (Chromosome
           chr18 scaffold_61, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00031964001 PE=4 SV=1
          Length = 290

 Score =  290 bits (742), Expect = 7e-77
 Identities = 140/182 (76%), Positives = 151/182 (82%), Gaps = 1/182 (0%)
 Frame = +2

Query: 182 NEELAKWYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYEL 361
           +EELAKWYGP RRI+LPEGLLDRSE+PAYLTGEVPGDYG+DPFGLSKKP DF KYQAYEL
Sbjct: 66  DEELAKWYGPDRRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYEL 125

Query: 362 IHARWAMLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPINXXXXX 541
           IHARWAMLGAAGFI+PEAFNK+GA CGPEAVWFKTGALLLDG ++ YFG  +PIN     
Sbjct: 126 IHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIFAV 185

Query: 542 XXXXXXXXXXEYYRASN-LQGFDRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFS 718
                     EYYR  N L   D+LHPGGPFDPLGLA DPDQ ALLKVKEIKNGRLAMF+
Sbjct: 186 VAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFA 245

Query: 719 ML 724
           ML
Sbjct: 246 ML 247


>tr|A9PJY2|A9PJY2_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 302

 Score =  289 bits (740), Expect = 1e-76
 Identities = 137/180 (76%), Positives = 152/180 (84%), Gaps = 1/180 (0%)
 Frame = +2

Query: 188 ELAKWYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIH 367
           ELAKWYGP RRI+LP+GLLDRSE+P YLTGEVPGDYG+DPFGLSKKP DF+KYQA+ELIH
Sbjct: 68  ELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFEKYQAFELIH 127

Query: 368 ARWAMLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPINXXXXXXX 547
           ARWAMLGAAGFI+PEAFNK+GA CGPEAVWFKTGALLLDG ++ YFG  +PIN       
Sbjct: 128 ARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVA 187

Query: 548 XXXXXXXXEYYRASNLQGF-DRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSML 724
                   EY+R +N  GF D+LHPGGPFDPLGLAKDPDQ ALLKVKEIKNGRLAMF+ML
Sbjct: 188 EVILVGGAEYFRITNGLGFDDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAML 247


>tr|A9PGZ3|A9PGZ3_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 290

 Score =  289 bits (740), Expect = 1e-76
 Identities = 137/180 (76%), Positives = 152/180 (84%), Gaps = 1/180 (0%)
 Frame = +2

Query: 188 ELAKWYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIH 367
           ELAKWYGP RRI+LP+GLLDRSE+P YLTGEVPGDYG+DPFGLSKKP DF+KYQA+ELIH
Sbjct: 68  ELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFEKYQAFELIH 127

Query: 368 ARWAMLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPINXXXXXXX 547
           ARWAMLGAAGFI+PEAFNK+GA CGPEAVWFKTGALLLDG ++ YFG  +PIN       
Sbjct: 128 ARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVA 187

Query: 548 XXXXXXXXEYYRASNLQGF-DRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSML 724
                   EY+R +N  GF D+LHPGGPFDPLGLAKDPDQ ALLKVKEIKNGRLAMF+ML
Sbjct: 188 EVILVGGAEYFRITNGLGFDDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAML 247


>tr|Q0PWS5|Q0PWS5_TOBAC Chloroplast pigment-binding protein CP26
           OS=Nicotiana tabacum GN=Lhcb5 PE=2 SV=1
          Length = 285

 Score =  287 bits (734), Expect = 6e-76
 Identities = 136/182 (74%), Positives = 151/182 (82%), Gaps = 1/182 (0%)
 Frame = +2

Query: 182 NEELAKWYGPARRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYEL 361
           +EELAKWYGP RRI+LP+GLLDRSE+P YL GEVPGDYG+DPFGLSKKP DF KYQAYEL
Sbjct: 61  DEELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYEL 120

Query: 362 IHARWAMLGAAGFILPEAFNKYGAACGPEAVWFKTGALLLDGGSIEYFGATVPINXXXXX 541
           IHARWAMLGAAGF++PEAFNK+GA CGPEAVWFKTGALLLDG ++ YFG  +PIN     
Sbjct: 121 IHARWAMLGAAGFVIPEAFNKFGADCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVVAV 180

Query: 542 XXXXXXXXXXEYYRASN-LQGFDRLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFS 718
                     EYYR +N L   D+LHPGGPFDPLGLAKDPDQ A+LKVKEIKNGRLAMF+
Sbjct: 181 VAEVVLLGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFA 240

Query: 719 ML 724
           ML
Sbjct: 241 ML 242