DK949330 |
Clone id |
TST38A01NGRL0005_L07 |
Library |
TST38 |
Length |
807 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_L07. 5' end sequence. |
Accession |
DK949330 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL84Contig2 |
Sequence |
GCTCCTTCACGTAACCATGCAATGAATGAGGCATGTGCAAGCGGAATGATCCTGACAGTG AGGGACGTCAGATGGGCAAACAAGTGTTATGTGCATTCCTCCTCCATTTGAAACTCAGTG GACATGGTTTCTGTGTAGTCTGGCAAGAGGAAGACCAAAGAGGTGAAGGAAGAGAATGTT ACTCTCAGTGGACCTGGTGCTCGTGACGGCGAGCACGTCTTTGGAGTAGCACATATTTTT GCCTCATTCAATGACACCTTCGTGCATGTCACAGATCTGTCTGGCAAGGAGACGCTTGCT CGAGTTACTGGTGGCATGAAGGTGAAAGCTGACAGAGACGAGTCTTCTCCGTACGCAGCC ATGCTTGCTGCTCAGGATGTGGCGCAGAAGTGCAAGGAGCTGGGGATCACCGCTCTGCAC ATCAAGCTGCGAGCAACTGGGGGTAACAAGACGAAGACGCCTGGTCCTGGCGCACAGTCT GCACTGAGAGCACTTGCTCGGTCTGGCATGCGGATTGGACGAATTGAGGATGTCACACCT ATCCCCACAGACAGCACAAGAAGGAAAGGTGGTAGAAGAGGTCGCCGGCTGTAAGGACAG CTGTAGACGCGATTGGATTTTCTTTGAACTATCTTTGCTTAAGGATGAATGTTTTTGTTC ACTCAAGCGAGCCTGAGGTAGACGTCCTAGCTCCAATGGAACTTGTTATGATTGAATTAT TGCAATAAGGCAAGTTTGGAAAAATTTTTGCTGGAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P19951 |
Definition |
sp|P19951|RS142_MAIZE 40S ribosomal protein S14 OS=Zea mays |
Align length |
140 |
Score (bit) |
218.0 |
E-value |
4.0e-56 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TTN2 |
Definition |
tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
140 |
Score (bit) |
224.0 |
E-value |
4.0e-57 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949330|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_L07, 5' (754 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella paten... 224 4e-57 tr|A9TNC8|A9TNC8_PHYPA Predicted protein OS=Physcomitrella paten... 222 2e-56 tr|B4FKA4|B4FKA4_MAIZE Putative uncharacterized protein OS=Zea m... 222 2e-56 tr|A7QQP3|A7QQP3_VITVI Chromosome undetermined scaffold_143, who... 221 5e-56 tr|B8LN86|B8LN86_PICSI Putative uncharacterized protein OS=Picea... 219 1e-55 tr|A7PPA9|A7PPA9_VITVI Chromosome chr8 scaffold_23, whole genome... 219 1e-55 tr|B3TM39|B3TM39_ELAGV Ribosomal protein S14 OS=Elaeis guineensi... 219 2e-55 tr|A7QF89|A7QF89_VITVI Chromosome undetermined scaffold_87, whol... 219 2e-55 tr|A5AX94|A5AX94_VITVI Putative uncharacterized protein OS=Vitis... 219 2e-55 tr|Q7XSA6|Q7XSA6_ORYSJ Os02g0534800 protein OS=Oryza sativa subs... 219 2e-55 tr|Q01IS6|Q01IS6_ORYSA OSIGBa0134P10.10 protein (OSIGBa0137L20.1... 219 2e-55 tr|A9PDW2|A9PDW2_POPTR Putative uncharacterized protein OS=Popul... 219 2e-55 tr|A9PBW7|A9PBW7_POPTR Putative uncharacterized protein OS=Popul... 219 2e-55 tr|A9P8E9|A9P8E9_POPTR Putative uncharacterized protein OS=Popul... 219 2e-55 tr|A3ATP4|A3ATP4_ORYSJ Putative uncharacterized protein OS=Oryza... 219 2e-55 tr|A2XT84|A2XT84_ORYSI Putative uncharacterized protein OS=Oryza... 219 2e-55 tr|A9PDF0|A9PDF0_POPTR Putative uncharacterized protein OS=Popul... 218 3e-55 tr|A9PIB5|A9PIB5_POPTR Putative uncharacterized protein OS=Popul... 218 4e-55 tr|Q6H7T1|Q6H7T1_ORYSJ Os02g0162500 protein OS=Oryza sativa subs... 217 6e-55 tr|B8AI71|B8AI71_ORYSI Putative uncharacterized protein OS=Oryza... 217 6e-55 tr|B4FJ48|B4FJ48_MAIZE Putative uncharacterized protein OS=Zea m... 217 8e-55 tr|B4FBS3|B4FBS3_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 217 8e-55 tr|B6UH09|B6UH09_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 216 1e-54 tr|B6T522|B6T522_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 216 1e-54 tr|B6T281|B6T281_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 215 3e-54 tr|B8LKR8|B8LKR8_PICSI Putative uncharacterized protein OS=Picea... 214 4e-54 tr|Q84X98|Q84X98_BRANA Cytoplasmic ribosomal protein S14 OS=Bras... 214 6e-54 tr|B6UHC8|B6UHC8_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 213 8e-54 tr|Q1H555|Q1H555_ARATH At3g11510 OS=Arabidopsis thaliana PE=2 SV=1 212 2e-53 tr|A6MZM7|A6MZM7_ORYSI 40S ribosomal protein S14 (Fragment) OS=O... 211 3e-53
>tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_198161 PE=3 SV=1 Length = 151
Score = 224 bits (572), Expect = 4e-57 Identities = 117/140 (83%), Positives = 122/140 (87%) Frame = +1
Query: 139 SGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGM 318 SGK+K + KEENVTL GP RDGEHVFGVAHIFASFNDTFVHVTDLSGKET+ARVTGGM Sbjct: 2 SGKKKVRAEKEENVTL-GPSVRDGEHVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGM 60
Query: 319 KVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALA 498 KVKADRDE+SPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALRALA Sbjct: 61 KVKADRDEASPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 499 RSGMRIGRIEDVTPIPTDST 558 RSGMRIGRIEDVTPIPTDST Sbjct: 121 RSGMRIGRIEDVTPIPTDST 140
>tr|A9TNC8|A9TNC8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_223910 PE=4 SV=1 Length = 151
Score = 222 bits (566), Expect = 2e-56 Identities = 116/140 (82%), Positives = 121/140 (86%) Frame = +1
Query: 139 SGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGM 318 SGK+K + KEENVTL GP RDGEHVFGVAHIFASFNDTFVHVTDLSGKET+ARVTGGM Sbjct: 2 SGKKKVRAEKEENVTL-GPSVRDGEHVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGM 60
Query: 319 KVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALA 498 KVKADRDE+SPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALRALA Sbjct: 61 KVKADRDEASPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 499 RSGMRIGRIEDVTPIPTDST 558 RS MRIGRIEDVTPIPTDST Sbjct: 121 RSNMRIGRIEDVTPIPTDST 140
>tr|B4FKA4|B4FKA4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 151
Score = 222 bits (565), Expect = 2e-56 Identities = 112/140 (80%), Positives = 123/140 (87%) Frame = +1
Query: 139 SGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGM 318 SG++KT+E KEENVTL GP R+GEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGM Sbjct: 2 SGRKKTREPKEENVTL-GPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 60
Query: 319 KVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALA 498 KVKADRDESSPYAAMLA+QDVAQ+CKELGITALHIKLRA AQSALRALA Sbjct: 61 KVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 499 RSGMRIGRIEDVTPIPTDST 558 RSGM+IGRIEDVTP+PTDST Sbjct: 121 RSGMKIGRIEDVTPVPTDST 140
>tr|A7QQP3|A7QQP3_VITVI Chromosome undetermined scaffold_143, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003445001 PE=3 SV=1 Length = 156
Score = 221 bits (562), Expect = 5e-56 Identities = 114/138 (82%), Positives = 120/138 (86%) Frame = +1
Query: 145 KRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKV 324 +RK +E KEENVTL GP RDGEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGMKV Sbjct: 9 RRKVREPKEENVTL-GPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 67
Query: 325 KADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARS 504 KADRDESSPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALRALARS Sbjct: 68 KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 127
Query: 505 GMRIGRIEDVTPIPTDST 558 GMRIGRIEDVTPIPTDST Sbjct: 128 GMRIGRIEDVTPIPTDST 145
>tr|B8LN86|B8LN86_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 151
Score = 219 bits (559), Expect = 1e-55 Identities = 114/140 (81%), Positives = 122/140 (87%) Frame = +1
Query: 139 SGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGM 318 SGK+K +E KE+NVTL GP R+GE VFGVAHIFASFNDTFVHVTDLSGKET+ARVTGGM Sbjct: 2 SGKKKVREPKEDNVTL-GPTVREGEQVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGM 60
Query: 319 KVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALA 498 KVKADRDESSPYAAMLAAQDVAQ+CKELG+TALHIKLRA AQSALRALA Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGLTALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 499 RSGMRIGRIEDVTPIPTDST 558 RSGM+IGRIEDVTPIPTDST Sbjct: 121 RSGMKIGRIEDVTPIPTDST 140
>tr|A7PPA9|A7PPA9_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021579001 PE=3 SV=1 Length = 173
Score = 219 bits (559), Expect = 1e-55 Identities = 113/140 (80%), Positives = 120/140 (85%) Frame = +1
Query: 139 SGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGM 318 + +RK +E KEENVTL GP RDGEH FGVAHIFASFNDTF+HVTDLSG+ETL R+TGGM Sbjct: 24 NSRRKVREPKEENVTL-GPTVRDGEHAFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 82
Query: 319 KVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALA 498 KVKADRDESSPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALRALA Sbjct: 83 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 142
Query: 499 RSGMRIGRIEDVTPIPTDST 558 RSGMRIGRIEDVTPIPTDST Sbjct: 143 RSGMRIGRIEDVTPIPTDST 162
>tr|B3TM39|B3TM39_ELAGV Ribosomal protein S14 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 150
Score = 219 bits (558), Expect = 2e-55 Identities = 112/138 (81%), Positives = 121/138 (87%) Frame = +1
Query: 145 KRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKV 324 +RKT+E KEENVTL GP R+GEHVFGVAHIFASFNDTF+HVTDLSG+ET+ R+TGGMKV Sbjct: 3 RRKTREPKEENVTL-GPTVREGEHVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKV 61
Query: 325 KADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARS 504 KADRDESSPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALRALARS Sbjct: 62 KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 121
Query: 505 GMRIGRIEDVTPIPTDST 558 GM+IGRIEDVTPIPTDST Sbjct: 122 GMKIGRIEDVTPIPTDST 139
>tr|A7QF89|A7QF89_VITVI Chromosome undetermined scaffold_87, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037325001 PE=3 SV=1 Length = 192
Score = 219 bits (558), Expect = 2e-55 Identities = 112/138 (81%), Positives = 120/138 (86%) Frame = +1
Query: 145 KRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKV 324 +RK +E KEENVTL GP RDGEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGMKV Sbjct: 45 RRKVREPKEENVTL-GPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 103
Query: 325 KADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARS 504 KADRDESSPYAAMLAAQDV+Q+CKELG+TALHIKLRA AQSALRALARS Sbjct: 104 KADRDESSPYAAMLAAQDVSQRCKELGVTALHIKLRATGGNKTKTPGPGAQSALRALARS 163
Query: 505 GMRIGRIEDVTPIPTDST 558 GMRIGRIEDVTPIPTDST Sbjct: 164 GMRIGRIEDVTPIPTDST 181
>tr|A5AX94|A5AX94_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018475 PE=3 SV=1 Length = 150
Score = 219 bits (558), Expect = 2e-55 Identities = 112/138 (81%), Positives = 120/138 (86%) Frame = +1
Query: 145 KRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKV 324 +RK +E KEENVTL GP RDGEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGMKV Sbjct: 3 RRKVREPKEENVTL-GPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61
Query: 325 KADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARS 504 KADRDESSPYAAMLAAQDV+Q+CKELG+TALHIKLRA AQSALRALARS Sbjct: 62 KADRDESSPYAAMLAAQDVSQRCKELGVTALHIKLRATGGNKTKTPGPGAQSALRALARS 121
Query: 505 GMRIGRIEDVTPIPTDST 558 GMRIGRIEDVTPIPTDST Sbjct: 122 GMRIGRIEDVTPIPTDST 139
>tr|Q7XSA6|Q7XSA6_ORYSJ Os02g0534800 protein OS=Oryza sativa subsp. japonica GN=OJ000126_13.9 PE=2 SV=2 Length = 151
Score = 219 bits (557), Expect = 2e-55 Identities = 111/140 (79%), Positives = 123/140 (87%) Frame = +1
Query: 139 SGKRKTKEVKEENVTLSGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGM 318 SG++KT+E KEENVTL GP R+GE+VFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGM Sbjct: 2 SGRKKTREPKEENVTL-GPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 60
Query: 319 KVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALA 498 KVKADRDESSPYAAMLA+QDVAQ+CKELGITALHIKLRA AQSALRALA Sbjct: 61 KVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 499 RSGMRIGRIEDVTPIPTDST 558 RSGM+IGRIEDVTP+PTDST Sbjct: 121 RSGMKIGRIEDVTPVPTDST 140
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