DK949337 |
Clone id |
TST38A01NGRL0005_L15 |
Library |
TST38 |
Length |
537 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_L15. 5' end sequence. |
Accession |
DK949337 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL15Contig1 |
Sequence |
TGCAGTGACCGTTCAGCTCCCTGGGGGTGAAAGGGTGCCCTTCTTGTTCACCATCAAGCA GCTTGTAGCCACAGGAAAGCCTGATGCCTTCAGTGGACAATTCTTGGTGCCTTCATACAG AGGTTCTTCCTTCCTTGACCCTAAGGGCCGTGGTGGCTCCCAAGGATATGACAACGCTGT GGCTATTCCTGCTGGAGGTGCTGGTGATGAGGAAGAGCTAGCGAAAGAGAATAACAAGGA TACAACCGCTCTTAATGGCAAAATCACATTCAGTGTTGCTAAAACCAACCTTGAAACTGG GGAGATTGGTGGTGTCTTTGAAAGTGTTCAGCCTTCTGATACTGACCTTGGCTCTAAAGC CCCCAAAGATGTCAAGATTCAGGGTATTTGGTATGCGCAAGTAGAGTAGACGGAGAAAAC TTGGGGTCTTTCCTTTCGCAAGGCCCTGGCTTGACCCTGTCCTTGTTTCTATATTGTTAT GTAAAGCAAAGTTCTGAAAAAAGGTGCCTGTTCATTAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O49079 |
Definition |
sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis |
Align length |
135 |
Score (bit) |
230.0 |
E-value |
3.0e-60 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949337|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0005_L15, 5' (516 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chlorop... 230 3e-60 sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloropla... 229 6e-60 sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chlorop... 228 1e-59 sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chlorop... 228 2e-59 sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chlorop... 226 5e-59 sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chlorop... 220 3e-57 sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chlo... 219 5e-57 sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chlo... 219 8e-57 sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chlorop... 201 1e-51 sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chlorop... 190 4e-48 sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1, chlorop... 186 6e-47 sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chlorop... 185 9e-47 sp|P13907|PSBO_ANASP Photosystem II manganese-stabilizing polype... 164 2e-40 sp|Q9R6W6|PSBO_CYAA5 Photosystem II manganese-stabilizing polype... 146 5e-35 sp|P0A431|PSBO_THEEB Photosystem II manganese-stabilizing polype... 140 3e-33 sp|P0A432|PSBO_SYNEN Photosystem II manganese-stabilizing polype... 140 3e-33 sp|P11472|PSBO_SYNE7 Photosystem II manganese-stabilizing polype... 136 5e-32 sp|P10549|PSBO_SYNY3 Photosystem II manganese-stabilizing polype... 132 7e-31 sp|P84989|PSBO_POPEU Oxygen-evolving enhancer protein 1, chlorop... 82 1e-15 sp|P84718|PSBO_PINST Putative oxygen-evolving enhancer protein 1... 40 0.006 sp|P81665|PSBO_PINPS Oxygen-evolving enhancer protein 1 (Fragmen... 35 0.16 sp|Q6PIF2|SYCE2_HUMAN Synaptonemal complex central element prote... 34 0.36 sp|O36027|WSP1_SCHPO Wiskott-Aldrich syndrome protein homolog 1 ... 32 1.4 sp|Q580R0|CB027_HUMAN Uncharacterized protein C2orf27 OS=Homo sa... 31 3.0 sp|P24506|SY62_DISOM Synaptotagmin-B OS=Discopyge ommata GN=P65-... 31 3.9 sp|A5DK47|DBP6_PICGU ATP-dependent RNA helicase DBP6 OS=Pichia g... 31 3.9 sp|Q9XD84|TIBA_ECOLX Adhesin/invasin tibA OS=Escherichia coli GN... 30 6.7 sp|Q9C4B4|CSG_HALJP Cell surface glycoprotein OS=Haloarcula japo... 30 6.7 sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic ... 30 8.7 sp|P29227|HP1_DROVI Heterochromatin protein 1 OS=Drosophila viri... 30 8.7
>sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1 Length = 329
Score = 230 bits (586), Expect = 3e-60 Identities = 111/135 (82%), Positives = 122/135 (90%) Frame = +2
Query: 2 AVTVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAV 181 AVTVQLPGGERVPFLFT+KQLVATGKP++FSG +LVPSYRGSSFLDPKGRGGS GYDNAV Sbjct: 195 AVTVQLPGGERVPFLFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAV 254
Query: 182 AIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKA 361 A+PAGG GDEEEL KEN KD ++ GKIT SV K+ ETGE+ GVFES+QPSDTDLGSKA Sbjct: 255 ALPAGGRGDEEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKA 314
Query: 362 PKDVKIQGIWYAQVE 406 PKDVKIQGIWYAQ+E Sbjct: 315 PKDVKIQGIWYAQLE 329
>sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1 Length = 329
Score = 229 bits (584), Expect = 6e-60 Identities = 110/135 (81%), Positives = 121/135 (89%) Frame = +2
Query: 2 AVTVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAV 181 AVTVQLPGGERVPFLFTIKQLVA+GKPD+FSG+FLVPSYRGSSFLDPKGRG S GYDNAV Sbjct: 194 AVTVQLPGGERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAV 253
Query: 182 AIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKA 361 A+PAGG GDEEEL KENNK + GKIT SV +T ETGE+ GVFES+QPSDTDLG+KA Sbjct: 254 ALPAGGRGDEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKA 313
Query: 362 PKDVKIQGIWYAQVE 406 PKDVKIQG+WYAQ+E Sbjct: 314 PKDVKIQGVWYAQLE 328
>sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2 Length = 329
Score = 228 bits (581), Expect = 1e-59 Identities = 110/135 (81%), Positives = 123/135 (91%) Frame = +2
Query: 2 AVTVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAV 181 AVTVQLPGGERVPFLFTIKQLVA+GKP++FSG+FLVPSYRGSSFLDPKGRGGS GYDNAV Sbjct: 195 AVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAV 254
Query: 182 AIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKA 361 A+PAGG GDEEEL KEN K+T +L GKIT SV ++ ETGE+ GVFES+QPSDTDLG+K Sbjct: 255 ALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKV 314
Query: 362 PKDVKIQGIWYAQVE 406 PKDVKIQGIWYAQ+E Sbjct: 315 PKDVKIQGIWYAQLE 329
>sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1 Length = 333
Score = 228 bits (580), Expect = 2e-59 Identities = 110/135 (81%), Positives = 123/135 (91%) Frame = +2
Query: 2 AVTVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAV 181 AVTVQLPGGERVPFLFTIKQLVA+GKP++FS FLVPSYRGSSFLDPKGRGGS GYDNAV Sbjct: 198 AVTVQLPGGERVPFLFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAV 257
Query: 182 AIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKA 361 A+PAGG GDEEEL KEN K+T +L GKITF+V K+N +TGE+ GVFES+QPSDTDLG+K Sbjct: 258 ALPAGGRGDEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKT 317
Query: 362 PKDVKIQGIWYAQVE 406 PKDVKIQGIWYAQ+E Sbjct: 318 PKDVKIQGIWYAQLE 332
>sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1 Length = 332
Score = 226 bits (576), Expect = 5e-59 Identities = 109/135 (80%), Positives = 123/135 (91%) Frame = +2
Query: 2 AVTVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAV 181 AVTVQLPGGERVPFLFTIKQLVA+GKP++FSG+FLVPSYRGSSFLDPKGRGGS GYDNAV Sbjct: 198 AVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAV 257
Query: 182 AIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKA 361 A+PAGG GDEEEL KEN K+T++ GKIT SV ++ ETGE+ GVFES+QPSDTDLG+K Sbjct: 258 ALPAGGRGDEEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKV 317
Query: 362 PKDVKIQGIWYAQVE 406 PKDVKIQGIWYAQ+E Sbjct: 318 PKDVKIQGIWYAQLE 332
>sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1 Length = 332
Score = 220 bits (561), Expect = 3e-57 Identities = 105/135 (77%), Positives = 119/135 (88%) Frame = +2
Query: 2 AVTVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAV 181 AVTVQLPGGERVPFLFTIKQLVA+GKP++FSG FLVPSYRGSSFLDPKGRGGS GYDNAV Sbjct: 196 AVTVQLPGGERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAV 255
Query: 182 AIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKA 361 A+PAGG GDEEEL KENNK+ + G IT SV + ETGE+ GVF+S+QPSDTDLG+K Sbjct: 256 ALPAGGRGDEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKV 315
Query: 362 PKDVKIQGIWYAQVE 406 PKDVKI+G+WYAQ+E Sbjct: 316 PKDVKIEGVWYAQLE 330
>sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1 Length = 331
Score = 219 bits (559), Expect = 5e-57 Identities = 104/135 (77%), Positives = 120/135 (88%) Frame = +2
Query: 2 AVTVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAV 181 AVTVQLPGGERVPFLFT+KQL A+GKP++FSG+FLVPSYRGSSFLDPKGRGGS GYDNAV Sbjct: 197 AVTVQLPGGERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAV 256
Query: 182 AIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKA 361 A+PAGG GDEEEL+KEN K+T A G+IT + K+ ETGE+ GVFES+QPSDTDLG+K Sbjct: 257 ALPAGGRGDEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKV 316
Query: 362 PKDVKIQGIWYAQVE 406 PKDVKIQG+WY Q+E Sbjct: 317 PKDVKIQGVWYGQIE 331
>sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2 Length = 332
Score = 219 bits (557), Expect = 8e-57 Identities = 105/135 (77%), Positives = 119/135 (88%) Frame = +2
Query: 2 AVTVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAV 181 AVTVQLPGGERVPFLFT+KQL A+GKPD+F+G+FLVPSYRGSSFLDPKGRGGS GYDNAV Sbjct: 198 AVTVQLPGGERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAV 257
Query: 182 AIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKA 361 A+PAGG GDEEEL KEN K+T A G+IT V K+ ETGE+ GVFES+QPSDTDLG+K Sbjct: 258 ALPAGGRGDEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKV 317
Query: 362 PKDVKIQGIWYAQVE 406 PKDVKIQG+WY Q+E Sbjct: 318 PKDVKIQGVWYGQLE 332
>sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1 Length = 325
Score = 201 bits (512), Expect = 1e-51 Identities = 103/135 (76%), Positives = 115/135 (85%) Frame = +2
Query: 2 AVTVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAV 181 AVTVQLPGGERV FLFT+KQLVATGKP++F FLVPSYRGSSFLDPKGRGGS GYDNA Sbjct: 192 AVTVQLPGGERVAFLFTVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAG 250
Query: 182 AIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKA 361 A+P GG GDEEELAKEN K+ ++ G IT SV K+ ETGE+ GVFESVQPSDTDL +A Sbjct: 251 ALPRGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL--EA 308
Query: 362 PKDVKIQGIWYAQVE 406 PKDVKIQG+WYAQ+E Sbjct: 309 PKDVKIQGVWYAQLE 323
>sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2 Length = 338
Score = 190 bits (482), Expect = 4e-48 Identities = 93/134 (69%), Positives = 106/134 (79%) Frame = +2
Query: 2 AVTVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAV 181 A TVQL GGERVPFLFTIK L+A G F GQF VPSYRG++FLDPKGRGG+ GYD AV Sbjct: 203 ATTVQLAGGERVPFLFTIKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAV 262
Query: 182 AIPAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKA 361 A+PA +GD+EE AKEN+K T A G I F VAK N ETGEI GVFES+QPSDTDLG+K Sbjct: 263 ALPA--SGDDEEYAKENSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKV 320
Query: 362 PKDVKIQGIWYAQV 403 PKD+K G+WYAQ+ Sbjct: 321 PKDIKTSGVWYAQI 334
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U1K9 |
Definition |
tr|A9U1K9|A9U1K9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
135 |
Score (bit) |
239.0 |
E-value |
6.0e-62 |
Report |
|