NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949347
Clone id TST38A01NGRL0005_M01
Library
Length 632
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_M01. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CGGAGTAGAAGAGTTGCGTAGGAGCTCGGCCGCAGGATGGGTATCTCACGGGACTCCACG
CACAAGAGGCGGGCAACTGGAGGCAAGAAGAAGACATGGCGCAAGAAAAGGAAATACGAG
TTGGGTCGTCAACCAGGCATGACTAAGCTGTCCAGTAACAAGACTGTAAGGAAGATCCGC
GTGCGGGGAGGCAATTTCAAGTTTCGTGCTCTGCGCCTTGATACTGGCAACTACTCATGG
GGATCAGAGGCAACGACCAGGAAGACCCGTATCTTAGATGTTGTCTACAATGCATCCAAT
AATGAGCTTGTTAGGACGCAGACGCTCGTGAAGTCTGCCATTGTTCAGGTGGATGCTGCA
CCTTTCCGCCAGTGGTATAGCCAGCACTATGGTGTGGACTTGGGAAAGAAGAAGAGAGCT
GCCAGTGCCAAGAAGGAAGCTGAGGACACGGATGCTACCGCAGGTGACGGGGAGAAGAAG
CAAAGCAAACATGTCGAGCGGAAGATATCTGCTCGTAATGAGGATCGCAAATTGGATGCT
CATCTGGAGGATCAAATTGCAAGTGGACGCCTTCTCGCTTGCATATCATCTCGTCCTGGC
CAATGTGGGCGAGCCGATGGTTATATTCTTGA
■■Homology search results ■■ -
sp_hit_id P49199
Definition sp|P49199|RS8_ORYSJ 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica
Align length 198
Score (bit) 263.0
E-value 7.0e-70
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949347|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_M01, 5'
         (632 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P49199|RS8_ORYSJ 40S ribosomal protein S8 OS=Oryza sativa sub...   263   7e-70
sp|Q93VG5|RS81_ARATH 40S ribosomal protein S8-1 OS=Arabidopsis t...   259   6e-69
sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 OS=Zea mays GN=RPS8...   256   7e-68
sp|Q9FIF3|RS82_ARATH 40S ribosomal protein S8-2 OS=Arabidopsis t...   249   1e-65
sp|O81361|RS8_PRUAR 40S ribosomal protein S8 OS=Prunus armeniaca...   245   2e-64
sp|Q90YR6|RS8_ICTPU 40S ribosomal protein S8 OS=Ictalurus puncta...   201   3e-51
sp|O76756|RS8_APIME 40S ribosomal protein S8 OS=Apis mellifera G...   201   3e-51
sp|Q8WQI5|RS8_SPOFR 40S ribosomal protein S8 OS=Spodoptera frugi...   195   1e-49
sp|P62247|RS8_DANRE 40S ribosomal protein S8 OS=Danio rerio GN=r...   194   2e-49
sp|Q9P7B2|RS8B_SCHPO 40S ribosomal protein S8-B OS=Schizosacchar...   194   2e-49
sp|O14049|RS8A_SCHPO 40S ribosomal protein S8-A OS=Schizosacchar...   194   3e-49
sp|P62243|RS8_RAT 40S ribosomal protein S8 OS=Rattus norvegicus ...   193   5e-49
sp|P62242|RS8_MOUSE 40S ribosomal protein S8 OS=Mus musculus GN=...   193   5e-49
sp|Q4R6P8|RS8_MACFA 40S ribosomal protein S8 OS=Macaca fascicula...   193   5e-49
sp|P62241|RS8_HUMAN 40S ribosomal protein S8 OS=Homo sapiens GN=...   193   5e-49
sp|Q5E958|RS8_BOVIN 40S ribosomal protein S8 OS=Bos taurus GN=RP...   193   5e-49
sp|Q8MLY8|RS8_DROME 40S ribosomal protein S8 OS=Drosophila melan...   193   7e-49
sp|Q9ZT56|RS8_GRIJA 40S ribosomal protein S8 OS=Griffithsia japo...   187   4e-47
sp|Q7SYU0|RS8_XENLA 40S ribosomal protein S8 OS=Xenopus laevis G...   186   7e-47
sp|Q4N3P0|RS8_THEPA 40S ribosomal protein S8 OS=Theileria parva ...   184   3e-46
sp|P05754|RS8_YEAST 40S ribosomal protein S8 OS=Saccharomyces ce...   183   6e-46
sp|Q54E24|RS8_DICDI 40S ribosomal protein S8 OS=Dictyostelium di...   179   8e-45
sp|P48156|RS8_CAEEL 40S ribosomal protein S8 OS=Caenorhabditis e...   177   3e-44
sp|Q4UFS9|RS8_THEAN 40S ribosomal protein S8 OS=Theileria annula...   177   5e-44
sp|P25204|RS8_LEIMA 40S ribosomal protein S8 OS=Leishmania major...   163   8e-40
sp|A3DNX9|RS8E_STAMF 30S ribosomal protein S8e OS=Staphylothermu...    59   3e-08
sp|P61301|RS8E_NANEQ 30S ribosomal protein S8e OS=Nanoarchaeum e...    55   4e-07
sp|Q6L0D3|RS8E_PICTO 30S ribosomal protein S8e OS=Picrophilus to...    54   5e-07
sp|A0B8P7|RS8E_METTP 30S ribosomal protein S8e OS=Methanosaeta t...    54   9e-07
sp|A2STM4|RS8E_METLZ 30S ribosomal protein S8e OS=Methanocorpusc...    53   1e-06

>sp|P49199|RS8_ORYSJ 40S ribosomal protein S8 OS=Oryza sativa subsp.
           japonica GN=RPS8 PE=2 SV=2
          Length = 220

 Score =  263 bits (671), Expect = 7e-70
 Identities = 135/198 (68%), Positives = 145/198 (73%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDS H                 YELGRQP  TKLSSNKTVR++RVRGGN K+RALR
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY  HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
           D+G               DA A   E K+S HV RK+  R + R LDAH+E+Q  SGRLL
Sbjct: 121 DIGRKKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLL 180

Query: 577 ACISSRPGQCGRADGYIL 630
           ACISSRPGQCGRADGYIL
Sbjct: 181 ACISSRPGQCGRADGYIL 198


>sp|Q93VG5|RS81_ARATH 40S ribosomal protein S8-1 OS=Arabidopsis
           thaliana GN=RPS8A PE=2 SV=1
          Length = 222

 Score =  259 bits (663), Expect = 6e-69
 Identities = 135/201 (67%), Positives = 149/201 (74%), Gaps = 3/201 (1%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDS H                 YE+GRQP  TKLSSNKTVR+IRVRGGN K+RALR
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGNYSWGSEATTRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPF+QWY  HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 397 DLGXXXXXXXXXXXXXDTD---ATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASG 567
           +LG             +     A A   E K+S H+ RKI++R E R LD+H+EDQ ASG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 568 RLLACISSRPGQCGRADGYIL 630
           RLLACISSRPGQCGRADGYIL
Sbjct: 181 RLLACISSRPGQCGRADGYIL 201


>sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 OS=Zea mays GN=RPS8
           PE=2 SV=2
          Length = 221

 Score =  256 bits (654), Expect = 7e-68
 Identities = 133/199 (66%), Positives = 144/199 (72%), Gaps = 1/199 (0%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDS H                 YELGRQP  TKLSSNKTVR++RVRGGN K+RALR
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY  HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 397 DLGXXXXXXXXXXXXXD-TDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRL 573
           D+G             +  +  A   E K+S HV RK+  R E R LD H+E+Q  SGRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180

Query: 574 LACISSRPGQCGRADGYIL 630
           LACISSRPGQCGRADGYIL
Sbjct: 181 LACISSRPGQCGRADGYIL 199


>sp|Q9FIF3|RS82_ARATH 40S ribosomal protein S8-2 OS=Arabidopsis
           thaliana GN=RPS8B PE=2 SV=1
          Length = 210

 Score =  249 bits (635), Expect = 1e-65
 Identities = 132/198 (66%), Positives = 146/198 (73%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDS H                 YELGRQP  TKLSSNKTVR+IRVRGGN K+RALR
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGN+SWGSEA TRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPF+Q Y QHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
           D+G               +A   + E K+S HV+RK+  R E R LD+HLE+Q +SGRLL
Sbjct: 121 DIGRKKKG----------EAVTTE-EVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLL 169

Query: 577 ACISSRPGQCGRADGYIL 630
           ACI+SRPGQCGRADGYIL
Sbjct: 170 ACIASRPGQCGRADGYIL 187


>sp|O81361|RS8_PRUAR 40S ribosomal protein S8 OS=Prunus armeniaca
           GN=RPS8 PE=2 SV=1
          Length = 221

 Score =  245 bits (625), Expect = 2e-64
 Identities = 127/198 (64%), Positives = 143/198 (72%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDS H                 YELGRQP  TKLSSNKTVR+IRVRGGN K+RALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY QHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
           ++G             + +  A   E K+S HV  K+  R + R LDAH+E+Q   G+LL
Sbjct: 121 EIGRKKKTAAAKKDTPE-EGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLL 179

Query: 577 ACISSRPGQCGRADGYIL 630
           ACISSRPGQCG+ADG IL
Sbjct: 180 ACISSRPGQCGKADGDIL 197


>sp|Q90YR6|RS8_ICTPU 40S ribosomal protein S8 OS=Ictalurus punctatus
           GN=rps8 PE=2 SV=3
          Length = 208

 Score =  201 bits (510), Expect = 3e-51
 Identities = 105/198 (53%), Positives = 127/198 (64%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRD+ H                 YELGR P  TKL   K +  +RVRGGN K+RALR
Sbjct: 1   MGISRDNWHKRRKTGGKRKPVHKKRKYELGRPPSNTKLGP-KRIHTVRVRGGNKKYRALR 59

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ ++ VD+APFRQWY  HY +
Sbjct: 60  LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVILVDSAPFRQWYESHYAL 119

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
            LG              T        KK+SK V++K   R ++ K+   L++Q   G+LL
Sbjct: 120 PLGRKKGAKL-------TPEEEDILNKKRSKKVQKKFDKRRKNSKISPLLDEQFQQGKLL 172

Query: 577 ACISSRPGQCGRADGYIL 630
           ACISSRPGQCGRADGY+L
Sbjct: 173 ACISSRPGQCGRADGYVL 190


>sp|O76756|RS8_APIME 40S ribosomal protein S8 OS=Apis mellifera
           GN=RpS8 PE=2 SV=2
          Length = 208

 Score =  201 bits (510), Expect = 3e-51
 Identities = 109/198 (55%), Positives = 127/198 (64%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRD  H                 +ELGR    TKL   + +  +R RGGN K+RALR
Sbjct: 1   MGISRDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQR-IHTVRTRGGNKKYRALR 59

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGN+SWGSE TTRKTRI+DVVYNASNNELVRT+TLVK+AIV +DA PFRQWY  HY +
Sbjct: 60  LDTGNFSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVL 119

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
            LG              T+A      KK+SK  E K  AR    K++  LE+Q A+GR+L
Sbjct: 120 PLGRKRGAKL-------TEAEEEVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATGRVL 172

Query: 577 ACISSRPGQCGRADGYIL 630
           ACISSRPGQCGR DGYIL
Sbjct: 173 ACISSRPGQCGREDGYIL 190


>sp|Q8WQI5|RS8_SPOFR 40S ribosomal protein S8 OS=Spodoptera
           frugiperda GN=RpS8 PE=2 SV=1
          Length = 208

 Score =  195 bits (496), Expect = 1e-49
 Identities = 106/198 (53%), Positives = 128/198 (64%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRD  H                 YELGR    TKL   + +  +R RGGN K+RALR
Sbjct: 1   MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQR-IHLVRSRGGNTKYRALR 59

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGN+SWGSE +TRK+RI+DVVYNASNNELVRT+TLVK+AIV VDA PFRQWY  HY +
Sbjct: 60  LDTGNFSWGSECSTRKSRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLL 119

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
            LG              T+A      KK+S+   +K  AR    K+++ LE+Q  +GRLL
Sbjct: 120 PLGRKKGAKL-------TEAEDAIINKKRSQKTAKKYLARQRLSKVESALEEQFHTGRLL 172

Query: 577 ACISSRPGQCGRADGYIL 630
           AC++SRPGQCGRADGYIL
Sbjct: 173 ACVASRPGQCGRADGYIL 190


>sp|P62247|RS8_DANRE 40S ribosomal protein S8 OS=Danio rerio GN=rps8
           PE=2 SV=2
          Length = 208

 Score =  194 bits (494), Expect = 2e-49
 Identities = 103/198 (52%), Positives = 125/198 (63%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRD+ H                 YELGR    TK+   + +  IRVRGGN K+RALR
Sbjct: 1   MGISRDNWHKRRRTGGKRKPVHKKRKYELGRPAANTKIGPRR-IHTIRVRGGNKKYRALR 59

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ +V VD+ P+RQWY  HY +
Sbjct: 60  LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVVLVDSTPYRQWYESHYAL 119

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
            LG              T        KK+SK V++K + R +  K+   LE+Q   G+LL
Sbjct: 120 PLGRKKGAKL-------TPEEEEILNKKRSKKVQKKFTLRRKTAKISPLLEEQFLQGKLL 172

Query: 577 ACISSRPGQCGRADGYIL 630
           ACISSRPGQCGRADGY+L
Sbjct: 173 ACISSRPGQCGRADGYVL 190


>sp|Q9P7B2|RS8B_SCHPO 40S ribosomal protein S8-B
           OS=Schizosaccharomyces pombe GN=rps8b PE=1 SV=1
          Length = 200

 Score =  194 bits (494), Expect = 2e-49
 Identities = 107/198 (54%), Positives = 128/198 (64%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGI+RDS H                 +ELGRQP  T++   K + ++RVRGGN KFRALR
Sbjct: 1   MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGP-KRIHEVRVRGGNKKFRALR 59

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LD+GN+SWGSE  ++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPFR WY  HYG+
Sbjct: 60  LDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGI 119

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
            +G                ATA    K  SKHV+RK SAR  D K+D+ LE Q A+GRL 
Sbjct: 120 LMG-----------SKGKKATATPTPK--SKHVQRKHSARLGDSKVDSALETQFAAGRLY 166

Query: 577 ACISSRPGQCGRADGYIL 630
           A +SSRPGQ GR DGYIL
Sbjct: 167 AVVSSRPGQSGRCDGYIL 184
tr_hit_id A9TGU7
Definition tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens
Align length 198
Score (bit) 268.0
E-value 2.0e-70
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949347|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_M01, 5'
         (632 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   268   2e-70
tr|A9T469|A9T469_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   268   3e-70
tr|A9NMS2|A9NMS2_PICSI Ribosomal protein S8 OS=Picea sitchensis ...   266   1e-69
tr|A9TQV8|A9TQV8_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   265   1e-69
tr|A9TG34|A9TG34_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   265   2e-69
tr|A9S3Y5|A9S3Y5_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...   265   2e-69
tr|A9NMR0|A9NMR0_PICSI Ribosomal protein S8 OS=Picea sitchensis ...   264   3e-69
tr|B8LML6|B8LML6_PICSI Putative uncharacterized protein OS=Picea...   264   4e-69
tr|Q0E158|Q0E158_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs...   263   8e-69
tr|B8AHZ6|B8AHZ6_ORYSI Putative uncharacterized protein OS=Oryza...   263   8e-69
tr|A9NNT7|A9NNT7_PICSI Ribosomal protein S8 OS=Picea sitchensis ...   263   8e-69
tr|A9P8H4|A9P8H4_POPTR Ribosomal protein S8 OS=Populus trichocar...   262   1e-68
tr|A9P8D2|A9P8D2_POPTR Ribosomal protein S8 OS=Populus trichocar...   262   1e-68
tr|B3TM36|B3TM36_ELAGV 40S ribosomal protein S8 OS=Elaeis guinee...   258   2e-67
tr|Q3HRZ6|Q3HRZ6_SOLTU Ribosomal protein S8 OS=Solanum tuberosum...   258   3e-67
tr|B7FMW0|B7FMW0_MEDTR Putative uncharacterized protein OS=Medic...   258   3e-67
tr|B4FGG1|B4FGG1_MAIZE Putative uncharacterized protein OS=Zea m...   258   3e-67
tr|A2XS59|A2XS59_ORYSI Ribosomal protein S8 OS=Oryza sativa subs...   257   4e-67
tr|Q7XKS7|Q7XKS7_ORYSA Ribosomal protein S8 OS=Oryza sativa GN=O...   256   8e-67
tr|Q0JDZ7|Q0JDZ7_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs...   256   8e-67
tr|B4FE90|B4FE90_MAIZE 40S ribosomal protein S8 OS=Zea mays PE=2...   256   8e-67
tr|A5AUZ0|A5AUZ0_VITVI Ribosomal protein S8 OS=Vitis vinifera GN...   255   1e-66
tr|A1YKE4|A1YKE4_BRASY Ribosomal protein S8 OS=Brachypodium sylv...   252   1e-65
tr|A3A6Z9|A3A6Z9_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs...   252   1e-65
tr|B7FGL5|B7FGL5_MEDTR Putative uncharacterized protein OS=Medic...   251   3e-65
tr|Q2XPV9|Q2XPV9_SOLTU Ribosomal protein S8 OS=Solanum tuberosum...   249   1e-64
tr|Q0WSK1|Q0WSK1_ARATH Ribosomal protein S8 OS=Arabidopsis thali...   249   1e-64
tr|A7P0G2|A7P0G2_VITVI Ribosomal protein S8 OS=Vitis vinifera GN...   245   2e-63
tr|B6DMH1|B6DMH1_9LAMI Putative 40S ribosomal protein S8-like pr...   242   2e-62
tr|A8HVQ1|A8HVQ1_CHLRE Ribosomal protein S8 OS=Chlamydomonas rei...   232   2e-59

>tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_194964 PE=3 SV=1
          Length = 216

 Score =  268 bits (685), Expect = 2e-70
 Identities = 138/198 (69%), Positives = 151/198 (76%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGNFKFRALR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNFKFRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYSQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
           ++G             D +      E+K+SKHV RKI+ R E +KLDAHLEDQ ASGRLL
Sbjct: 121 EIG----KKKKTAAKKDAEEAEATEEEKKSKHVLRKIAKRVESQKLDAHLEDQFASGRLL 176

Query: 577 ACISSRPGQCGRADGYIL 630
           ACI+SRPGQCGR DGYIL
Sbjct: 177 ACIASRPGQCGRVDGYIL 194


>tr|A9T469|A9T469_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_191463 PE=3 SV=1
          Length = 216

 Score =  268 bits (684), Expect = 3e-70
 Identities = 140/198 (70%), Positives = 151/198 (76%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGN KFRALR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGN+SWGSEA TRKTRILDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYSQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
           ++G             +T     + EKKQS HV RKI+ R E +KLDAHLEDQ ASGRLL
Sbjct: 121 EIGKKKKAAVKKEEVAETT----EEEKKQSSHVLRKIAKRAEGQKLDAHLEDQFASGRLL 176

Query: 577 ACISSRPGQCGRADGYIL 630
           ACISSRPGQCGR+DGYIL
Sbjct: 177 ACISSRPGQCGRSDGYIL 194


>tr|A9NMS2|A9NMS2_PICSI Ribosomal protein S8 OS=Picea sitchensis
           PE=2 SV=1
          Length = 221

 Score =  266 bits (679), Expect = 1e-69
 Identities = 134/198 (67%), Positives = 148/198 (74%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDS H                 YELGRQP MTKLSSNKTVR++RVRGGN K+RALR
Sbjct: 1   MGISRDSLHKKRATGGKKKVWRKKRKYELGRQPSMTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQWY QHYG+
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYEQHYGL 120

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
           D+G             +      + EKK+SKH+ +KI  R E  KLD+HLE+Q ASGRLL
Sbjct: 121 DIGRKKKAAAAKKETTEEGEATAEEEKKKSKHLLKKIEKRQEGHKLDSHLEEQFASGRLL 180

Query: 577 ACISSRPGQCGRADGYIL 630
           A I+SRPGQCGRADGYIL
Sbjct: 181 AAIASRPGQCGRADGYIL 198


>tr|A9TQV8|A9TQV8_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_110504 PE=3 SV=1
          Length = 216

 Score =  265 bits (678), Expect = 1e-69
 Identities = 138/198 (69%), Positives = 152/198 (76%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGN KFRALR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYSQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
           ++G             D +A A + + KQS HV RKI+ R E +KLD+HLEDQ ASGRLL
Sbjct: 121 EIG----KKKKAAAKKDEEAEATEEQTKQSGHVLRKIAKRVEGQKLDSHLEDQFASGRLL 176

Query: 577 ACISSRPGQCGRADGYIL 630
           ACI+SRPGQCGRADGYIL
Sbjct: 177 ACIASRPGQCGRADGYIL 194


>tr|A9TG34|A9TG34_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_194737 PE=3 SV=1
          Length = 216

 Score =  265 bits (676), Expect = 2e-69
 Identities = 136/198 (68%), Positives = 152/198 (76%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGN KFRALR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYSQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
           ++G             DT+      E+K+S HV+RK++ R E +KLD+HLEDQ ASGRLL
Sbjct: 121 EIG----KKKKAAAKKDTEDAETTEEEKKSAHVQRKLAKRLEGQKLDSHLEDQFASGRLL 176

Query: 577 ACISSRPGQCGRADGYIL 630
           ACI+SRPGQCGRADGYIL
Sbjct: 177 ACIASRPGQCGRADGYIL 194


>tr|A9S3Y5|A9S3Y5_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_208398 PE=3 SV=1
          Length = 216

 Score =  265 bits (676), Expect = 2e-69
 Identities = 136/198 (68%), Positives = 151/198 (76%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDSTH                 YELGRQ  MTKLSSNKTVR+IRVRGGN KFRALR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRTQTLVK+AIVQVDAAPFR WYSQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIVQVDAAPFRTWYSQHYGV 120

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
           ++G             D++      E+K+S HV++K++ R E  KLD+HLEDQ ASGRLL
Sbjct: 121 EIG----KKKKSAAKKDSEDAEATEEEKKSNHVQKKLAKRVEGHKLDSHLEDQFASGRLL 176

Query: 577 ACISSRPGQCGRADGYIL 630
           ACI+SRPGQCGRADGYIL
Sbjct: 177 ACIASRPGQCGRADGYIL 194


>tr|A9NMR0|A9NMR0_PICSI Ribosomal protein S8 OS=Picea sitchensis
           PE=2 SV=1
          Length = 221

 Score =  264 bits (675), Expect = 3e-69
 Identities = 133/198 (67%), Positives = 147/198 (74%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDS H                 YELGRQP MTKLSSNKTVR++RVRGGN K+RALR
Sbjct: 1   MGISRDSLHKKRATGGKKKVWRKKRKYELGRQPSMTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQWY QHYG+
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYEQHYGL 120

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
           D+G             +      + EKK+SKH+ +KI  R E  KLD+HLE+Q  SGRLL
Sbjct: 121 DIGRKKKAAAAKKETTEEGEATAEEEKKKSKHLLKKIEKRQEGHKLDSHLEEQFGSGRLL 180

Query: 577 ACISSRPGQCGRADGYIL 630
           A I+SRPGQCGRADGYIL
Sbjct: 181 AAIASRPGQCGRADGYIL 198


>tr|B8LML6|B8LML6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 221

 Score =  264 bits (674), Expect = 4e-69
 Identities = 133/198 (67%), Positives = 147/198 (74%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDS H                 YELGRQP MTKLSSNKTVR++RVRGGN K+RALR
Sbjct: 1   MGISRDSLHKKRATGGKKKVWRKKRKYELGRQPSMTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGNYSWGSE  TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQWY QHYG+
Sbjct: 61  LDTGNYSWGSEPVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYEQHYGL 120

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
           D+G             +      + EKK+SKH+ +KI  R E  KLD+HLE+Q ASGRLL
Sbjct: 121 DIGRKKKAAAAKKETTEEGEATAEEEKKKSKHLLKKIEKRQEGHKLDSHLEEQFASGRLL 180

Query: 577 ACISSRPGQCGRADGYIL 630
           A I+SRPGQCGRADGYIL
Sbjct: 181 AAIASRPGQCGRADGYIL 198


>tr|Q0E158|Q0E158_ORYSJ Ribosomal protein S8 OS=Oryza sativa subsp.
           japonica GN=Os02g0489400 PE=2 SV=1
          Length = 220

 Score =  263 bits (671), Expect = 8e-69
 Identities = 135/198 (68%), Positives = 145/198 (73%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDS H                 YELGRQP  TKLSSNKTVR++RVRGGN K+RALR
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY  HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
           D+G               DA A   E K+S HV RK+  R + R LDAH+E+Q  SGRLL
Sbjct: 121 DIGRKKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLL 180

Query: 577 ACISSRPGQCGRADGYIL 630
           ACISSRPGQCGRADGYIL
Sbjct: 181 ACISSRPGQCGRADGYIL 198


>tr|B8AHZ6|B8AHZ6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07259 PE=4 SV=1
          Length = 220

 Score =  263 bits (671), Expect = 8e-69
 Identities = 135/198 (68%), Positives = 145/198 (73%)
 Frame = +1

Query: 37  MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQPGMTKLSSNKTVRKIRVRGGNFKFRALR 216
           MGISRDS H                 YELGRQP  TKLSSNKTVR++RVRGGN K+RALR
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 217 LDTGNYSWGSEATTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSQHYGV 396
           LDTGNYSWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY  HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 397 DLGXXXXXXXXXXXXXDTDATAGDGEKKQSKHVERKISARNEDRKLDAHLEDQIASGRLL 576
           D+G               DA A   E K+S HV RK+  R + R LDAH+E+Q  SGRLL
Sbjct: 121 DIGRKKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLL 180

Query: 577 ACISSRPGQCGRADGYIL 630
           ACISSRPGQCGRADGYIL
Sbjct: 181 ACISSRPGQCGRADGYIL 198